Jin Zhu Z - OmicsDI

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Unknown (2129)
Proteomics (71)
Genomics (12)
Metabolomics (12)
Transcriptomics (7)
Multiomics (3)

Organisms

Chlamydomonas reinhardtii (41)
Pseudomonas canadensis (41)
Marchantia polymorpha subsp. ruderalis (41)
Methylocystis sp. (41)
Exiguobacterium sp. SH31 (41)
Porites pukoensis (41)
Bothrops insularis (41)
Bothrops jararaca (41)
Bothrops jararacussu (41)
Bothrops cotiara (41)
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (41)
Dinosauria (41)
Trypanosoma vivax Y486 (41)
Streptomyces coelicolor (41)
Pseudomonas taiwanensis (41)
Burkholderia ubonensis MSMB22 (41)
Pseudomonas aeruginosa PA103 (41)
Artibeus jamaicensis (41)
Morchella importuna (41)
Homo sapiens (27)
Mus musculus (11)
Oryza sativa (1)
Sus scrofa (1)
Arabidopsis thaliana (1)
Tetrahymena thermophila SB210 (1)
Aeromonas hydrophila subsp. hydrophila AL09-71 (1)
Spinacia oleracea (1)
Vicia faba var. faba (1)
Rattus rattus (1)
Oryctolagus cuniculus (1)

Repository

pride (41)
iProX (24)
MetaboLights (12)
biostudies-arrayexpress (10)
EGA (9)
PeptideAtlas (3)
PAXDB (2)
MassIVE (1)

Tissue

Cell culture (13)
Others (3)
Blood serum (3)
Liver (3)
Blood cell (2)
Plant cell (2)
Heart (2)
Embryo (2)
Epithelial cell (2)
Leaf (2)
Macrophage (2)
Short term hematopoietic stem cell (1)
Tachyzoite (1)
Thallus (1)
Haploid cell (1)
Prostate gland epithelium (1)
Shoot (1)
Prostate cancer cell line (1)
Cardiac muscle cell (1)
Oocyte (1)
B cell (1)
Stem cell (1)
Stomach (1)
Lung (1)
Brain (1)
Blood plasma (1)
Keratinocyte (1)
Embryonic stem cell (1)
Whole body (1)
Hepatocyte (1)

Disease

Pancreatic cancer (2)
Stomach disease (1)
Arrhythmogenic right ventricular cardiomyopathy (1)
Inflammation (1)
Severe acute respiratory syndrome (1)
Metabolic dysfunction-associated steatotic liver disease (1)
Disease free (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (41)
Shotgun proteomics (22)
Mass spectrometry (10)
Bottom-up proteomics (9)
Data-dependent acquisition (5)
Top-down proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (3)
NextSeq 550, ILLUMINA (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Proteogenomics (1)
Gel-based experiment (1)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
Gas Chromatography MS - positive (2)
LTQ Orbitrap Elite (2)
Orbitrap Eclipse (1)
Xevo G2-XS QTOF (Waters) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Bruker (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
QExactive (1)

Publication Date

2022 (15)
2021 (12)
2025 (11)
2026 (10)
2024 (9)
2014 (7)
2023 (7)
2015 (4)
2017 (4)
2020 (3)
2019 (3)
2018 (2)
2016 (2)
2013 (1)
2012 (1)
2011 (1)
2008 (1)

UNIPROT ID/AC

A0A1U8I5D9_GOSHI (1)
A0A1U8JJB5_GOSHI (1)
A0A1U8MVN2_GOSHI (1)
A0A1U8JNP8_GOSHI (1)
A0A1U8I503_GOSHI (1)
A0A1U8IHH2_GOSHI (1)
A0A1U8KMS6_GOSHI (1)
A0A1U8I7F8_GOSHI (1)
A0A1U8IFP4_GOSHI (1)
A0A1U8PGD5_GOSHI (1)
A0A1U8LR08_GOSHI (1)
A0A1U8NZJ4_GOSHI (1)
A0A1U8LAF1_GOSHI (1)
A0A1U8JEL9_GOSHI (1)
A0A1U8JP78_GOSHI (1)
A0A1U8LLV4_GOSHI (1)
L7NU96_GOSHI (1)
A0A1U8PIP9_GOSHI (1)
A0A1U8KMI1_GOSHI (1)
A0A1U8KRI2_GOSHI (1)
A0A1U8L3I2_GOSHI (1)
A0A1U8N2N5_GOSHI (1)
A0A1U8P370_GOSHI (1)
A0A1U8MEB7_GOSHI (1)
A0A1U8LNN2_GOSHI (1)
A0A1U8NT01_GOSHI (1)
A0A1U8KAQ9_GOSHI (1)
A0A1U8JMT9_GOSHI (1)
A0A1U8PHJ5_GOSHI (1)
A0A1U8KQW8_GOSHI (1)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000247315 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:17351 (5)
CHEBI:30769 (5)
CHEBI:30805 (4)
CHEBI:15756 (4)
CHEBI:16995 (4)
CHEBI:16015 (4)
CHEBI:15428 (4)
CHEBI:16196 (4)
CHEBI:28875 (4)
CHEBI:16958 (4)
CHEBI:17596 (4)
CHEBI:15741 (4)
CHEBI:18012 (4)
CHEBI:16335 (4)
CHEBI:80790 (3)
CHEBI:18186 (3)
CHEBI:16000 (3)
CHEBI:17276 (3)
CHEBI:15929 (3)
CHEBI:17697 (3)
CHEBI:15551 (3)
CHEBI:17189 (3)
CHEBI:26984 (3)
CHEBI:16704 (3)
CHEBI:18211 (3)
CHEBI:27266 (3)
CHEBI:17568 (3)
CHEBI:28837 (3)
CHEBI:16168 (3)
CHEBI:26271 (3)

Metabolite Name

L-lysine (3)
L-histidine (3)
Glycine (3)
Fumaric acid (3)
L-proline (3)
Succinic acid (3)
L-methionine (3)
Phloretin (3)
D-sphingosine (2)
N-acetyl-D-tryptophan (2)
L-norleucine (2)
Ethanolamine (2)
Isoxanthopterin (2)
Palmitoleic acid (2)
L-cysteine (2)
L-homoserine (2)
Caprylic acid (2)
2-hydroxypyridine (2)
Tagatose (2)
Ribulose-5-phosphate (2)
Oxalic acid (2)
Mucic acid (2)
Malonic acid (2)
Monoolein (2)
N-benzylformamide (2)
Glycolic acid (2)
Oleic acid (2)
Glycerol (2)
L-serine (2)
Heptadecanoic acid (2)

Modification

6x(2)H labeled dimethylated L-arginine (1)

Study type

Transcription profiling by array (4)
Methylation profiling by high throughput sequencing (2)
RNA-seq of coding RNA (2)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (375)
2022 (297)
2023 (291)
2024 (275)
2021 (216)
2020 (146)
2019 (97)
2017 (83)
2015 (70)
2018 (66)
2016 (58)
2014 (49)
2026 (45)
2013 (23)
2012 (18)
2011 (10)
2008 (5)
2010 (4)
2009 (3)
2005 (2)
2002 (2)
2007 (1)
2006 (1)
2004 (1)
2001 (1)

Lab affiliation

University at buffalo, SUNY (3)
Mayo Clinic, Department of Oncology (2)
Key Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Ministry of Agriculture, Department of Horticulture, Zhejiang University, Hangzhou 310058, China (1)
School of Chinese Integrative Medicine,Hebei Medical University,Shijiazhuang,China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Department of Pharmaceutical Sciences, University at Buffalo, Buffalo, New York, United States (1)
Life Sciences Institute, Zhejiang University (1)
Department of Cardiology, Putuo Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, China (1)
Key Laboratory of Separation Sciences for Analytical Chemistry, National Chromatographic R&A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences (CAS), Dalian 116023, Liaoning, P. R. China. (1)
School of Pharmacy, Lanzhou University, Lanzhou, China (1)
School of lifescience, Nanjing University, China (1)
Key Laboratory for Metabolic Diseases in Chinese Medicine, Nanjing University of Chinese Medicine (1)
Shanghai Veterinary Research Institute, Chinese Academy of Agriculture Sciences, Shanghai, China (1)
Wenzhou Medical University (Zhejiang, China) (1)
Lineberger Comprehensive Cancer Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA Department of Biochemistry and Biophysics, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
College of Animal Science and Veterinary Medicine, Huazhong Agricultural University, Wuhan, China (1)
1. Institute of Comparative Medicine, College of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China 2. Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University, Yangzhou 225009, China (1)
Xiangya Hospital, Central South University (1)
Yu Faxiang Laboratory, Institute of Biomedical Sciences, Fudan University, Shanghai, China (1)
Research Center for Blood Engineering and Manufacturing, Cyrus Tang Medical Institute, National Clinical Research Center for Hematologic Diseases, Collaborative Innovation Center of Hematology, Jiangsu Institute of Hematology, Institute of Blood and Marrow Transplantation, The First Affiliated Hospital of Soochow University, State Key Laboratory of Radiation Medicine and Protection, Soochow University, Suzhou, China. (1)
Beijing Tongren Hospital, Capital Medical University (1)
1.College of Veterinary Medicine, College of Animal Science, Jilin University, Changchun, 130062, China. 2. Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, 130122, China. (1)
Beijing proteome research center, Beijing, China (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing 211166, China (1)
State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Animal Science and Technology, Guangxi University, Nanning, P.R. China (1)
Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, and Jilin University (1)
Institute of Systems Biomedicine Peking University Health Science Center Beijing 100191, P.R. China (1)
School of Pharmaceutical Sciences, Wenzhou Medical University (1)
Department of Medicine, UF Health Cancer Center, University of Florida, Gainesville, FL 32610, USA. (1)
Professor, Department of Cell and Regenerative Biology Professor, Department of Chemistry Director of Mass Spectrometry Human Proteomics Program School of Medicine and Public Health University of Wisconsin-Madison (1)

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The IDI1/SREBP2 axis drives intrahepatic cholestasis and is a treatment target of San-Huang-Cai-Zhu formula identified by sequencing and experiments.

Not available

S-EPMC9944032 | biostudies-literature

FGF13 in septic lung injury: A regulator of the ERK/aerobic glycolysis axis in the inflammatory state

HEK293T cells were transfected with Flag-FGF13 plasmids, and cells were performed with immunoprecipitation by Flag antibody or IgG (CST, 3900, USA) with protein A/G beads (Meck, LSKMAGAG10, USA). Coimmunoprecipitation was carried out in HEK293T cells and visualized with silver staining by using the ...

ORGANISM(S): Homo sapiens (Human)

2025-12-17 | PXD057743 | Pride

Polynucleotide Phosphorylase Regulates Multiple Virulence Factors and the Stabilities of Small RNAs RsmY/Z in Pseudomonas aeruginosa.

Not available

S-EPMC4773659 | biostudies-literature

Chromosome-Level Genome Assembly of Anthidium xuezhongi Niu & Zhu, 2020 (Hymenoptera: Apoidea: Megachilidae: Anthidiini).

Not available

S-EPMC8850706 | biostudies-literature

The polymorphism of Insulin-like growth factor-I (IGF-I) is related to osteoporosis and bone mineral density in postmenopausal population.

Not available

S-EPMC3955557 | biostudies-literature

Expression data from embryonic stem cells differentiation

Pluripotency-associated transcription factor Foxd3 is required for maintaining pluripotent cells. However, the molecular mechanisms underlying its function are largely unknown. Here, we report that Foxd3 maintains the ESC identity through counteracting differentiation induction of Calcienurin-NFAT s...

ORGANISM(S): Mus musculus

2014-08-18 | E-GEOD-58960 | biostudies-arrayexpress

Synthesis and Characterization of Porous MgO Nanosheet-Modified Activated Carbon Fiber Felt for Fluoride Adsorption.

Not available

S-EPMC10051765 | biostudies-literature

Genome-wide profiling of small RNAs in rice under abiotic stresses

To identify novel miRNA and NAT-siRNAs that are associated with abiotic stresses in rice, we generated small RNA sequences from inflorescences from rice under control and under dought, salt, and cold stress treatments. Over 30 million reads were generated. sequencing of small RNAs in rice under cont...

ORGANISM(S): Oryza sativa

2012-03-12 | E-GEOD-26357 | biostudies-arrayexpress

Renal recruitment of B lymphocytes exacerbates tubulointerstitial fibrosis by promoting monocyte mobilization and infiltration after unilateral ureteral obstruction.

Not available

S-EPMC6680279 | biostudies-literature

High Luminous Efficacy Phosphor-Converted Mass-Produced White LEDs Achieved by AlN Prebuffer and Transitional-Refraction-Index Patterned Sapphire Substrate.

Not available

S-EPMC9147444 | biostudies-literature