Johnson C S CS - OmicsDI

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Unknown (810)
Transcriptomics (73)
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Homo sapiens (40)
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Arabidopsis thaliana (9)
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biostudies-arrayexpress (77)
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pride (4)
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Mass spectrometry (5)
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2010 (12)
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2011 (9)
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CHEBI ID

CHEBI:16828 (2)
CHEBI:17750 (2)
CHEBI:18344 (2)
CHEBI:131762 (1)
CHEBI:134428 (1)
CHEBI:14321 (1)
CHEBI:145234 (1)
CHEBI:1467 (1)
CHEBI:15355 (1)
CHEBI:155821 (1)
CHEBI:15611 (1)
CHEBI:15727 (1)
CHEBI:15760 (1)
CHEBI:15774 (1)
CHEBI:15843 (1)
CHEBI:15887 (1)
CHEBI:15891 (1)
CHEBI:15903 (1)
CHEBI:16015 (1)
CHEBI:16108 (1)
CHEBI:16128 (1)
CHEBI:16235 (1)
CHEBI:16288 (1)
CHEBI:16332 (1)
CHEBI:16335 (1)
CHEBI:16347 (1)
CHEBI:16349 (1)
CHEBI:16353 (1)
CHEBI:16393 (1)
CHEBI:16463 (1)

Metabolite Name

Kynurenic acid (2)
(2S)-2-isopropyl-3-oxosuccinate (1)
(S)-2-aceto-2-hydroxybutanoate (1)
1,2-benzoquinone (1)
1-Amino-2-Ethoxybenzene (1)
1-Naphthylamine (1)
1-aminocyclopropane-1-carboxylate (1)
1-methylguanosine (1)
2,3-Dihydroxybenzoic acid (1)
2-dehydropantoate (1)
2-isopropylmaleate (1)
3-Methylxanthine (1)
4-Hydroxybenzoylcholine (1)
4-Methylmorpholine-N-Oxide (1)
4-Pyridoxic acid (1)
4-Trimethylammoniobutanoic acid (1)
4-aminobutyraldehyde (1)
5-Aminovaleric acid (1)
5-Methylcytosine Hydrochloride (1)
5-Methyltryptamine Hydrochloride (1)
6,7-dimethyl-8-(1-D-ribityl)lumazine (1)
Acetylcholine (1)
Adenine (1)
Adenosine (1)
Alpha,alpha-trehalose (1)
Alpha-D-glucose (1)
Amylopectin (1)
Aspartame (1)
Aspartate (1)
Auraptenol (1)

Study type

Transcription profiling by array (42)
Methylation profiling by array (8)
RNA-seq of coding RNA (5)
Unknown experiment type (4)
Methylation profiling by high throughput sequencing (3)
ChIP-chip by tiling array (2)
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Human - High-throughput sequencing (1)
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RNA-seq of coding RNA from single cells (1)

Release Date

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2021 (69)
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2018 (68)
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2015 (57)
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2014 (56)
2019 (46)
2012 (45)
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2016 (34)
2011 (34)
2017 (33)
2010 (32)
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2008 (14)
2009 (13)
2006 (5)
2004 (2)
2007 (1)

Lab affiliation

Department of Chemistry and Biochemistry, The University of Texas at Dallas (1)
Department of Pharmacology University of North Carolina - Chapel Hill Chapel Hill, NC 27599 (1)
Entomology Dept., 740 Russell Labss, University of Wisconsin-Madison, USA (1)
Pratik Jagtap, Managing Director, Center for Mass Spectrometry and Proteomics, 43 Gortner Laboratory, 1479 Gortner Avenue, St. Paul, MN 55108 Phone: 612-624-9275 (1)

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destructin-1 related files

This is a training data set for destructin-1 protease digestion of a synthetic peptide library for substrate specificity profiling. Data is related to the following publication: O'Donoghue AJ, Knudsen GM, Beekman C, Perry JA, Johnson AD, DeRisi JL, Craik CS, Bennett RJ. "Destructin-1 is a collagen-...

ORGANISM(S): Synthetic Construct (ncbitaxon:32630) Pseudogymnoascus (ncbitaxon:78156)

2015-11-24 | MSV000079388 | MassIVE

East Asian Cryphalus Erichson (Curculionidae, Scolytinae): new species, new synonymy and redescriptions of species.

Not available

S-EPMC7688620 | biostudies-literature

Innate Immune Responses and P. falciparum CS Repeat-Specific Neutralizing Antibodies Following Vaccination by Skin Scarification.

Not available

S-EPMC9207416 | biostudies-literature

Segmental isotope labeling of proteins for NMR structural study using a protein S tag for higher expression and solubility.

Not available

S-EPMC4117381 | biostudies-literature

Immunogenicity of the Ad26.COV2.S Vaccine for COVID-19.

Not available

S-EPMC7953339 | biostudies-literature

Transcription profiling of Drosophila developmental time series

Michelle N. Arbeitman, Eileen E. M. Furlong, Farhad Imam, Eric Johnson, Brian H. Null, Bruce S. Baker, Mark A. Krasnow, Matthew P. Scott, Ronald W. Davis and Kevin P. White. Gene Expression During the Life Cycle of Drosophila melanogaster, Science, 297: 2270-2275, 2002. This work can be accessed fro...

ORGANISM(S): Drosophila melanogaster

2004-11-06 | E-FLYC-6 | biostudies-arrayexpress

Expression data from Arabidopsis thaliana under phosphate starvation stress

We performed a transcriptomic analysis of Pi starvation responses in Arabidopsis thaliana (Columbia-0) wild type plants under phosphate starvation stress and in plants with altered PHR1(-like) activity, comparing mutants of phr1 and phr1-phl1 grown in phosphate-lacking medium. Results show the centr...

ORGANISM(S): Arabidopsis thaliana

2010-12-09 | E-GEOD-16722 | biostudies-arrayexpress

Deletion of choline acetyltransferase in enteric neurons results in postnatal intestinal dysmotility and dysbiosis.

Not available

S-EPMC6103169 | biostudies-literature

PRPF8 CLIP seq for iPSC, kidney organoid, retinal organoid, and retinal epithelium derived from c.6926A>C RPE with Retinitis Pigmentosa patients and CRISPR/Cas9 corrected

Retinitis Pigmentosa is a group of inherited eye disorders characterized by progressive degeneration of photoreceptor cells in the retina, leading to vision loss and eventual blindness. One of the known genetic mutations associated with RP is the c.6926A>C mutation in the RPE (retinal pigment epithe...

ORGANISM(S): Homo sapiens

2024-03-13 | E-MTAB-13171 | biostudies-arrayexpress

The Partitioning of RNAs in sperm

A diverse pool of RNAs remain encapsulated within the transcriptionally and translationally silent spermatozoon. These transcripts persist within the male gamete despite the dramatic reduction in cellular volume achieved through expulsion of the cytoplasm and quite possibly the nucleoplasm. The prec...

ORGANISM(S): Mus musculus

2015-07-08 | E-GEOD-62874 | biostudies-arrayexpress

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