Johnson Max M - OmicsDI

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Unknown (234)
Proteomics (41)
Transcriptomics (13)
Metabolomics (13)
Genomics (2)
Genomic (1)

Organisms

Homo sapiens (28)
Mus musculus (12)
Drosophila melanogaster (4)
Candida albicans (2)
Vibrio cholerae (2)
Caulobacter vibrioides (1)
Bradyrhizobium japonicum (1)
Chlamydomonas reinhardtii (1)
Rattus norvegicus (1)
Bacteria (1)
Bat coronavirus RaTG13 (1)
Glycine max (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Solanum lycopersicum (1)
Triticum aestivum (1)
Vibrio cholerae O1 biovar El Tor str. N16961 (1)
environmental samples (1)

Repository

pride (40)
biostudies-arrayexpress (14)
MetaboLights (12)
dbGaP (1)
EGA (1)
GNPS (1)
MassIVE (1)

Tissue

Cell culture (5)
Brain (4)
Cell suspension culture (3)
Epithelial cell (3)
T cell (3)
B cell (2)
Breast (2)
Endospore (2)
Kidney (2)
Primary cell (2)
B-lymphocyte (1)
Blood (1)
Colon (1)
Embryo (1)
Endometrial cancer cell line (1)
Epithelial ovarian cancer cell (1)
Fibroblast (1)
Gastrointestinal stromal tumor cell (1)
Kidney cell (1)
Lung (1)
Melanocyte (1)
Monocyte (1)
Neuron (1)
Neuron apoptotic process (1)
Plant cell (1)
Pluripotent stem cell (1)
Pollen (1)
Retina (1)
Skin (1)
Stem cell (1)

Disease

Melanoma (3)
Breast cancer (2)
Cholera (2)
Lymphoma (2)
Malignant neoplasm of ovary (2)
Neurofibromatosis 1 (2)
Alzheimer's disease (1)
Brain glioblastoma multiforme (1)
Disease free (1)
Endometrial cancer (1)
Global developmental delay (1)
Hereditary spastic paraplegia 47 (1)
Hereditary spastic paraplegia 50 (1)
Hereditary spastic paraplegia 51 (1)
Hereditary spastic paraplegia 52 (1)
Lung cancer (1)
Night blindness (1)
Non-small cell lung carcinoma (1)
Renal cell carcinoma (1)

Technology Type

Mass Spectrometry (40)
Shotgun proteomics (22)
Affinity purification coupled with mass spectrometry proteomics (12)
Mass spectrometry (9)
Bottom-up proteomics (3)
Gel-based experiment (3)
Mass spectrometry assay (2)
NMR spectroscopy (2)
Top-down proteomics (2)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - hilic (2)
Nuclear Magnetic Resonance (NMR) - (2)
LTQ FT (1)
MaXis (1)
Q-Exactive HF-X (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase - Exactive (Thermo Scientific) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive (1)

Publication Date

2024 (9)
2023 (9)
2020 (9)
2022 (7)
2021 (6)
2019 (4)
2015 (3)
2012 (3)
2011 (3)
2010 (3)
2026 (3)
2017 (2)
2025 (2)
2018 (2)
2013 (1)
2007 (1)
2004 (1)

CHEBI ID

CHEBI:16359 (4)
CHEBI:28865 (4)
CHEBI:15428 (3)
CHEBI:16449 (3)
CHEBI:17126 (3)
CHEBI:18186 (3)
CHEBI:24898 (3)
CHEBI:25017 (3)
CHEBI:25094 (3)
CHEBI:27266 (3)
CHEBI:34494 (3)
CHEBI:35038 (3)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:15354 (2)
CHEBI:15603 (2)
CHEBI:16015 (2)
CHEBI:16196 (2)
CHEBI:16755 (2)
CHEBI:16811 (2)
CHEBI:17234 (2)
CHEBI:173703 (2)
CHEBI:17568 (2)
CHEBI:17750 (2)
CHEBI:18211 (2)
CHEBI:18257 (2)
CHEBI:182784 (2)
CHEBI:195271 (2)
CHEBI:27432 (2)

Metabolite Name

Cholic acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
9(10)-EpOME (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
Dibutyl phthalate (DBP) (2)
Elaidic acid (2)
Lyso-PC(16:0) (2)
Monoolein (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Taurocholic acid (2)
Taurocholic acid (2)
(Nω-L-arginino)succinic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
1,1-Dichloroethylene (1)
1,3,5-triprop-2-enyl-1,3,5-triazaperhydroine-2,4,6-trione (1)
1,4a-dimethyl-9-oxo-7-propan-2-yl-3,4,10,10a-tetrahydro-2H-phenanthrene-1-carboxylic acid (1)
1-(9Z-Octadecenoyl)-sn-glycero-3-phosphocholine (1)
1-Heptadecanoyl-sn-glycero-3-phosphocholine (1)
1-Hexadecanoyl-sn-glycerol (1)
1-Hexadecyl-sn-glycero-3-phosphocholine (1)
1-Methylnicotinamide (1)
1-Methylxanthine (1)
1-Myristoyl-2-stearoyl-sn-glycero-3-phosphocholine (1)
1-Myristoyl-sn-glycero-3-phosphocholine (1)
1-Palmitoyl-2-myristoyl-sn-glycero-3-phosphocholine (1)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (3)
ChIP-chip by tiling array (1)
ChIP-seq (1)

Release Date

2022 (23)
2023 (22)
2021 (20)
2020 (20)
2025 (19)
2024 (17)
2015 (16)
2018 (14)
2019 (13)
2017 (12)
2016 (11)
2014 (11)
2013 (10)
2012 (8)
2011 (7)
2008 (6)
2010 (5)
2026 (5)
2007 (4)
2004 (1)
2009 (1)
2005 (1)
2002 (1)
2001 (1)

Lab affiliation

Cancer Biology Department, Fox Chase Cancer Center, Philadelphia, PA, USA (2)
Department of Pharmacology University of North Carolina - Chapel Hill Chapel Hill, NC 27599 (2)
Tumor Biology Department Molecular Medicine Program Moffitt Cancer Center Tampa, FL, USA (2)
University of Michigan (2)
Bacteriology Department, University of Wisconsin-Madison (1)
Bioanalytical Mass Spectrometry Group, Max-Planck-Institute for Biophysical Chemistry Department of Clinical Chemistry, University Medical Center Goettingen (1)
Bioanalytical Mass Spectrometry Group,Max-Planck-Institute for Multidisciplinary Sciences,Goettingen, Germany (1)
Brown University Department of Molecular Biology, Cellular Biology, and Biochemistry (1)
Deaprtment of Pediatrics, Herman B Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN, 46202 (1)
Department of Biological Engineering, Koch Institute of Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA (1)
Department of Cell Biology and Physiology Lineberger Comprehensive Cancer Center University of North Carolina at Chapel Hill 450 West Drive Lineberger Building CB#7295 Chapel Hill, NC, 27599, USA. Telephone: (919)-259-2695. (1)
Department of Integrated Immunobiology Duke School of Medicine Durham, NC, USA (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA (1)
Department of Microbiology and Immunology University of Michigan Medical School 1150 West Medical Center drive 6744 Med Sci II Ann Arbor, MI 48109 Phone: 734-764-3552 (1)
Department of Microbiology and Immunology and Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, 27599, USA. (1)
Department of Oncology, The Johns Hopkins University School of Medicine's Sidney Kimmel Comprehensive Cancer Center, Baltimore, MD, USA (1)
Department of Pediatrics, Herman B Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202 (1)
Department of Pharmacology & Chemical Biology W1351 Thomas Starzl Biomedical Science Tower, 200 Lothrop St,Pittsburgh, PA 15261 (1)
Department of Pharmacology, University of North Carolina Chapel Hill School of Medicine, Chapel Hill, NC USA (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
Department of Radiation Oncology, Robert Wood Johnson Medical School, Rutgers Cancer Institute of New Jersey, New Brunswick, NJ (1)
Department of Surgery, Robert-Wood-Johnson Medical School University Hospital, Rutgers University, The State University of New Jersey, New Brunswick, NJ, USA. (1)
Functional Proteomics, ICR (1)
Georgetown University, USA (1)
Infection and Immunity Program, Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia (1)
Institute for Cardiovascular Regeneration, Centre for Molecular Medicine, Goethe University Frankfurt am Main, Germany (1)
Manchester Institute of Biotechnology, School of Biological Sciences, Manchester Academic Health Sciences Centre, The University of Manchester, Princess Street, Manchester, M1 7DN, UK (1)
Marine Chemistry Geochemistry Woods Hole Oceanographic Institution (1)
Max Planck Institute of Immunobiology and Epigenetics Freiburg, Germany (1)
Molecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, PA, USA (1)

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Extrapolating Guselkumab Efficacy to Juvenile Psoriatic Arthritis from Adult Psoriatic Arthritis and Adult and Pediatric Psoriasis Data.

Not available

S-EPMC12864257 | biostudies-literature

The impact of nutritional supplementation on sweat metabolomic content

Sweat is emerging as a prominent biosource for real-time human performance monitoring applications. Although promising, sources of variability must be identified to truly utilize sweat for biomarker applications. In this proof-of-concept study, a targeted metabolomics method was applied to sweat col...

2021-03-15 | MTBLS2427 | MetaboLights

Transcription profiling of Drosophila developmental time series

Michelle N. Arbeitman, Eileen E. M. Furlong, Farhad Imam, Eric Johnson, Brian H. Null, Bruce S. Baker, Mark A. Krasnow, Matthew P. Scott, Ronald W. Davis and Kevin P. White. Gene Expression During the Life Cycle of Drosophila melanogaster, Science, 297: 2270-2275, 2002. This work can be accessed fro...

ORGANISM(S): Drosophila melanogaster

2004-11-06 | E-FLYC-6 | biostudies-arrayexpress

mHtt tobacco roots proteome, QEHFX

Samples were analyzed using a nanoACQUITY UPLC system (Waters) coupled to a Q-Exactive HF-X high resolution accurate mass tandem mass spectrometer (Thermo) via a nanoelectrospray ionization source. Briefly the sample was first trapped on a Symmetry C18 180 micron x 20 mm trapping column (5 microlite...

ORGANISM(S): Nicotiana Tabacum (ncbitaxon:4097)

2019-11-07 | MSV000084557 | MassIVE

All-comEr Registry of OCT (AERO) to Investigate the MLD-MAX Algorithm for OCT-guided-precision-PCI in Daily Routine: Rationale and Study Design of ILUMIEN-V-AERO.

Not available

S-EPMC12784262 | biostudies-literature

The original Michaelis constant: translation of the 1913 Michaelis-Menten paper.

Not available

S-EPMC3381512 | biostudies-literature

IRIP, a new ischemia/reperfusion-inducible protein that participates in the regulation of transporter activity.

Not available

S-EPMC1190334 | biostudies-literature

Mutational Spectrum, Copy Number Changes, and Outcome: Results of a Sequencing Study of Patients With Newly Diagnosed Myeloma.

Not available

S-EPMC6485456 | biostudies-literature

Interlaboratory Variability in the Madin-Darby Canine Kidney Cell Proteome.

Not available

S-EPMC10324398 | biostudies-literature

Longitudinal multi-omics reveals subset-specific mechanisms underlying irritable bowel syndrome

The gut microbiome has been implicated in multiple human chronic gastrointestinal (GI) disorders. Determining its mechanistic role in disease has been difficult due to apparent disconnects between animal and human studies and lack of an integrated multi-omics view of disease-specific physiologica...

2020-09-08 | MTBLS1396 | MetaboLights

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304 Results

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