Sort   by:  
 Page size 
TranscriptomicsSingle-cell RNA-seq analysis of cutaneous wound healing in mouse
Studying the transcriptomic response of different epidermal stem cell populations to wounding has been difficult due to intermixing of wound healing and homeostastic cells from different stem cell pools in bulk-cell sequencing setups. Here, we circumvent those problems by using a single-cell sequenc...
ORGANISM(S): Mus musculus 
2018-04-01 | E-MTAB-6583 | biostudies-arrayexpress
TranscriptomicsQuantitative single-cell RNA-seq
Purpose: We applied cDNA molecule counting using unique molecular identifiers combined with high-throughput sequencing to study the transcriptome of individual mouse embryonic stem cells, with spike-in controls to monitor technical performance. We further examined transcriptional noise in the embryo...
ORGANISM(S): Mus musculus 
2013-12-20 | E-GEOD-46980 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Lgr6+ keratinocyte populations in the epidermis and hair follicle
RNA sequencing was performed on sorted populations of Lgr6-positive and Lgr6-negative keratinocytes from the interfollicular epidermis and the hair follicle/sebaceous gland, in order to determine the compartment-specific expression signatures of Lgr6+ progenitor cells.
ORGANISM(S): Mus musculus 
2015-10-22 | E-MTAB-3533 | biostudies-arrayexpress
GenomicsBP_August_2015_RNA-Seq_plasma_cell_on_GRCh38 - samples
RNA-Seq data for 4 plasma cell sample(s). 4 run(s), 4 experiment(s), 4 alignment(s) on human genome GRCh38. Part of BLUEPRINT release August 2015. Analysis documentation available at http://ftp.ebi.ac.uk/pub/databases/blueprint/releases/20150820/homo_sapiens/README_rnaseq_analysis_crg_20150820
EGAD00001001523 | EGA
GenomicsBP_August_2016_RNA-Seq_Multiple_Myeloma_on_GRCh38 - samples
RNA-Seq data for 14 Multiple Myeloma sample(s). 14 run(s), 14 experiment(s), 14 analysis(s) on human genome GRCh38. Part of BLUEPRINT release August 2016. Analysis documentation available at http://ftp.ebi.ac.uk/pub/databases/blueprint/releases/20160816/homo_sapiens/README_rnaseq_analysis_crg_201608...
EGAD00001002401 | EGA
GenomicsBP_August_2015_RNA-Seq_Multiple_myeloma_on_GRCh38 - samples
RNA-Seq data for 11 Multiple myeloma sample(s). 11 run(s), 11 experiment(s), 11 alignment(s) on human genome GRCh38. Part of BLUEPRINT release August 2015. Analysis documentation available at http://ftp.ebi.ac.uk/pub/databases/blueprint/releases/20150820/homo_sapiens/README_rnaseq_analysis_crg_20150...
EGAD00001001471 | EGA
GenomicsBP_August_2016_RNA-Seq_plasma_cell_on_GRCh38 - samples
RNA-Seq data for 7 plasma cell sample(s). 7 run(s), 7 experiment(s), 7 analysis(s) on human genome GRCh38. Part of BLUEPRINT release August 2016. Analysis documentation available at http://ftp.ebi.ac.uk/pub/databases/blueprint/releases/20160816/homo_sapiens/README_rnaseq_analysis_crg_20160816
EGAD00001002323 | EGA
GenomicsHistone H3, lysine 27 acetylation ChIP-seq in NALM6 expressing ETV6-RUNX1
ETV6-RUNX1 is a fusion protein bringing together almost the entire coding sequence of RUNX1, including the DNA binding runt domain, and the N-terminus of ETV6 which is known to include transcriptional repressors including histone deacetylation 3 (HDAC3). Here we perform ChIP-seq for the active chrom...
ORGANISM(S): Homo sapiens 
2022-10-31 | E-MTAB-12207 | biostudies-arrayexpress
Genomicsena-DATASET-PICR-28-07-2014-16:35:04:391-518 - samples
NGS of 10 mucosal melanomas: Whole genome sequencing of 5 mucosal melanomas and matched normal DNA Whole exome sequencing of 5 mucosal melanomas and matched normal DNA
EGAD00001000945 | EGA
GenomicsWhole genome sequencing and whole exome sequencing of mucosal melanoma
We conducted whole genome sequencing of 5 mucosal melanomas and their matched DNA from blood. We conducted whole exome sequencing of a further 5 mucosal melanomas and their matched DNA from blood.
EGAS00001000474 | EGA
Sort   by:  
 Page size