Jun Zhao Z - OmicsDI

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Unknown (2511)
Proteomics (47)
Metabolomics (36)
Transcriptomics (18)
Genomics (7)

Organisms

Homo sapiens (39)
Mus musculus (15)
Rattus norvegicus (3)
Urocitellus parryii (2)
Oryza sativa (2)
Triticum aestivum (2)
Cunninghamia lanceolata (1)
Bombyx mori (1)
Macaca mulatta (1)
Bos taurus (1)
Heterocephalus glaber (1)
Sus scrofa (1)
Paulownia (1)
Pseudomonas aeruginosa PAO1 (1)
Strawberry leafy fruit phytoplasma (1)

Repository

MetaboLights (35)
iProX (27)
biostudies-arrayexpress (19)
pride (19)
EGA (6)
GNPS (1)
MassIVE (1)

Tissue

Cell culture (5)
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Brain (1)
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Disease

Amyotrophic lateral sclerosis (1)
Bacterial infectious disease (1)
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Capillary leak syndrome (1)
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Kaposi's sarcoma (1)
Melanoma (1)

Technology Type

Mass spectrometry (31)
Mass Spectrometry (19)
Shotgun proteomics (10)
Mass spectrometry assay (4)
Data-dependent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Gel-based experiment (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
All-ion fragmentation (1)
Bottom-up proteomics (1)
Mass spectrometry imaging (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (14)
Liquid Chromatography MS - positive - reverse phase (14)
Liquid Chromatography MS - positive - hilic (7)
Liquid Chromatography MS - negative - hilic (5)
Gas Chromatography MS - (4)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - negative (2)
UPLC Q-TOF Premier (Waters) (2)
Ion Torrent PGM (1)
Illumina HiSeq 2000 (1)
MicrOTOF-Q II (1)
Q Exactive (1)
LTQ Orbitrap Elite (1)
Capillary electrophoresis MS - negative (1)
Capillary electrophoresis MS - positive (1)
Flow injection analysis MS - negative (1)
Flow injection analysis MS - positive (1)
Gas Chromatography MS - positive - medium polarity - Flame ionisation detector MS - positive (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating – hilic (1)
MS Imaging - (1)
Xevo G2 QTOF (Waters) (1)
Xevo QTof MS (Waters) (1)

Publication Date

2022 (17)
2025 (14)
2023 (14)
2024 (12)
2021 (10)
2020 (6)
2012 (5)
2014 (4)
2013 (3)
2010 (3)
2015 (2)
2011 (2)
2026 (2)
2017 (2)
2016 (2)
2008 (1)
2019 (1)
2018 (1)

CHEBI ID

CHEBI:15756 (12)
CHEBI:16196 (12)
CHEBI:16704 (11)
CHEBI:17351 (11)
CHEBI:16750 (10)
CHEBI:17568 (10)
CHEBI:17596 (10)
CHEBI:28865 (10)
CHEBI:30769 (10)
CHEBI:15891 (9)
CHEBI:16335 (9)
CHEBI:16919 (9)
CHEBI:17368 (9)
CHEBI:17687 (9)
CHEBI:17859 (9)
CHEBI:22660 (9)
CHEBI:28842 (9)
CHEBI:15741 (8)
CHEBI:15843 (8)
CHEBI:16708 (8)
CHEBI:17154 (8)
CHEBI:17748 (8)
CHEBI:17895 (8)
CHEBI:18237 (8)
CHEBI:27897 (8)
CHEBI:28044 (8)
CHEBI:28716 (8)
CHEBI:28875 (8)
CHEBI:7916 (8)
CHEBI:116314 (7)

Metabolite Name

Xanthine (9)
Guanosine (8)
Inosine (8)
Taurine (8)
Uridine (8)
Adenine (7)
Adenosine (7)
Creatine (7)
Hypoxanthine (7)
Uracil (7)
Cytidine (6)
Oleic acid (6)
Taurocholic acid (6)
Thymidine (6)
Citric acid (5)
Creatinine (5)
Guanine (5)
L-Arginine (5)
L-Tyrosine (5)
N-Acetyl-D-glucosamine (5)
Riboflavin (5)
Xanthosine (5)
4-Pyridoxic acid (4)
Acetylcarnitine (4)
Aspartame (4)
Cholesterol sulfate (4)
Deoxycholic acid (4)
Dodecanoic acid (4)
Glutamic acid (4)
Glutaric acid (4)

Study type

Transcription profiling by array (10)
RNA-seq of coding RNA (4)
RNA-seq of non coding RNA (2)
Other (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2022 (405)
2023 (362)
2021 (291)
2024 (262)
2025 (257)
2020 (237)
2019 (156)
2018 (127)
2017 (110)
2016 (95)
2015 (64)
2014 (43)
2013 (24)
2012 (19)
2011 (15)
2010 (15)
2026 (15)
2009 (11)
2008 (10)
2007 (6)
2006 (2)
2005 (2)
2004 (1)
2001 (1)

Lab affiliation

CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (1)
Cleveland Clinic Florida Research and Innovation Center (1)
College of Pharmacy, Jinan University, Guangzhou 510632, P. R. China (1)
Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA (1)
Departments of Neurology and Neuroscience Mayo Clinic, Rochester, MN, USA (1)
Institute for Agri-food Standards & Testing Technology, Shanghai Academy of Agricultural Sciences, Shanghai, China (1)
Institute of Biology, Hangzhou Academy of Agricultural Sciences (1)
Institute of Paulownia, Henan Agricultural University,95 Wenhua Road, Jinshui District,450002 Zhengzhou, Henan, P.R. China. (1)
Lung and Vascular Inflammation Section Laboratory of Allergic Diseases, NIAID, NIH USA (1)
MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, 510275, Guangzhou, Guangdong, China. (1)
Ningbo University (1)
Northwest University (1)
State Key Lab of Rice Biology, China National Rice Research Institute (1)
State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agroproducts, Key Laboratory of Biotechnology in Plant Protection of MOA of China and Institute of Plant Virology, Ningbo University, Ningbo, 315211, China (1)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China. (1)
Tangshan gongren hospital (1)
University of Cologne, Faculty of Medicine and Cologne University Hospital, Department I of Internal Medicine, Center for Integrated Oncology Aachen Bonn Cologne Duesseldorf, Center for Molecular Medicine Cologne; CECAD Center of Excellence on Cellular Stress Responses in Aging-Associated Diseases, 50931 Cologne, Germany (1)
University of Mississippi , Department of Biochemistry (1)
VIB-KU Leuven Center for Cancer Biology, VIB, 3000 Leuven, Belgium; Department of Oncology, KU Leuven, Herestraat 49, 3000 Leuven, Belgium (1)

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The proteomics data for Increased matrix stiffness promotes fibrogenesis of hepatic stellate cells through AP-1-induced chromatin priming

Matrix stiffness has significant effects on cell behavior, however, less is known regarding the epigenomic and transcriptional regulation underling the effect of matrix stiffness on cells. In this study, we use an in vitro system to assess the phenotypic shifts of hepatic stellate cells (HSCs) follo...

ORGANISM(S): Homo Sapiens

2025-04-19 | PXD063173 |

Metabolic Engineering for Efficient Production of Z,Z-Farnesol in E. coli.

Not available

S-EPMC10303002 | biostudies-literature

Jnk1 in murine hepatic stellate cells is a crucial mediator of liver fibrogenesis

Hepatic fibrosis is a wound-healing response to chronic liver injury, which may result in cirrhosis and liver failure. The c-Jun N-terminal kinase-1 (JNK1) gene has been shown to be involved in liver fibrosis. Here, we aimed to investigate the molecular mechanism and identify the cell-type involved ...

ORGANISM(S): Mus musculus

2013-11-27 | E-GEOD-40041 | biostudies-arrayexpress

Low-Dose Trans-Resveratrol Ameliorates Diabetes-Induced Retinal Ganglion Cell Degeneration via TyrRS/c-Jun Pathway.

Not available

S-EPMC10241309 | biostudies-literature

CTLA-4 and MDR1 polymorphisms increase the risk for ulcerative colitis: A meta-analysis.

Not available

S-EPMC4566373 | biostudies-literature

Functional Annotation of the Bovine Genome

The goal of the proposed project is to generate high-quality detailed transcript and chromatin status datasets from a comprehensive set of bovine tissues, developmental stages, and cells through a set of rationally selected assays. Experimental data generated by the project have been analyzed using ...

ORGANISM(S): Bos taurus

2022-10-13 | E-MTAB-12052 | biostudies-arrayexpress

JUN mediates glucocorticoid resistance by stabilizing HIF1a in T cell acute lymphoblastic leukemia.

Not available

S-EPMC10661119 | biostudies-literature

Radiation-induced c-Jun activation depends on MEK1-ERK1/2 signaling pathway in microglial cells.

Not available

S-EPMC3351464 | biostudies-literature

SENP3-mediated deSUMOylation of c-Jun facilitates microglia-induced neuroinflammation after cerebral ischemia and reperfusion injury.

Not available

S-EPMC10272502 | biostudies-literature

Tumor-secreted LCN2 impairs gastric cancer progression via autocrine inhibition of the 24p3R/JNK/c-Jun/SPARC axis.