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Transcriptomicsrrp6l1-2 project
1, Using mRNA-Seq to get expression profiling of rrp6l1-2 mutant and Col-0 wild-type (WT); 2,Using MethylC-Seq to provide single-base resolution of DNA methylation status in rrp6l1-2 mutant; 3, Using small RNA-Seq(sRNA-Seq) to get small RNA profiling of rrp6l1-2 and WT mRNA-Seq: 2 samples examined, ...
ORGANISM(S): Arabidopsis thaliana 
2014-04-16 | E-GEOD-50486 | biostudies-arrayexpress
UnknownEsophageal cancer with a double aortic arch: a case report and literature review.
Not available
S-EPMC8915513 | biostudies-literature
GenomicsChIP-seq of WT(with 35S-SUC2 transgene) and proMBD7::gMBD7:4xMYC transgenic plants
In eukaryotes, heterochromatin is characterized by numerous epigenetic marks, including DNA methylation. Spreading of these marks into nearby active genes must be avoided in order to maintain appropriate gene expression. Here, we uncover Arabidopsis Methyl-CpG-Binding Domain 7 (MBD7) and Increased D...
ORGANISM(S): Arabidopsis thaliana 
2015-01-29 | E-GEOD-58789 | biostudies-arrayexpress
GenomicsMethlyC-Seq of ibm1-4
Using MethylC-Seq to provide single-base resulution of DNA methylation status in ibm1-4 mutant 1 sample examined, ibm1-4 mutant
ORGANISM(S): Arabidopsis thaliana 
2013-09-06 | E-GEOD-48053 | biostudies-arrayexpress
TranscriptomicsmRNA-Seq of asi1-1, wild-type and MethlyC-Seq of asi1-1
1, Using mRNA-Seq to get expression profiling of asi1-1 mutant and WT; 2, Using MethylC-Seq to provide single-base resulution of DNA methylation status in asi1-1 mutant mRNA-Seq: 2 samples examined, Col-0 wild-type with 35S-SUC2 transgene(termed as WT) and asi1-1 mutant (Col-0 background with 35S-SU...
ORGANISM(S): Arabidopsis thaliana 
2013-09-06 | E-GEOD-48026 | biostudies-arrayexpress
UnknownGemcitabine enhances the transport of nanovector-albumin-bound paclitaxel in gemcitabine-resistant pancreatic ductal adenocarcinoma.
Not available
S-EPMC5560598 | biostudies-literature
GenomicsWhole genome bisulfite sequencing of idm1, rdd, ros1 mutants and Col-0 WT
Using whole genome bisulfite sequencing to provide single-base resulution of DNA methylation status in ros1, idm1, and rdd mutants and identify hypermethylated regions comparing to wild type Arabidopsis plants. Examination of 3 different mutants' methylome. 8 samples (3 mutants, 1 WT, each has two b...
ORGANISM(S): Arabidopsis thaliana 
2012-06-17 | E-GEOD-33071 | biostudies-arrayexpress
GenomicsMethylC-Seq of ago6-2, ago4-6 and ago4-6 ago6-2 double mutants
Using MethylC-Seq to provide single-base resolution of DNA methylation status in ago6-2, ago4-6 and ago4-6 ago6-2 double mutants MethylC-Seq: 3 mutants examined, ago6-2, ago4-6 single mutant and ago4-6 ago6-2 double mutants
ORGANISM(S): Arabidopsis thaliana 
2015-01-06 | E-GEOD-56388 | biostudies-arrayexpress
TranscriptomicsMeDIP-chip of zdp mutant
Using meDIP-chip to provide methylation profile in zdp mutant and identify hypermethylated regions comparing to wild type Arabidopsis plants. Examination of zdp mutant's methylome. 4 samples(1 mutant, 1 WT, each has two biological replicates)
ORGANISM(S): Arabidopsis thaliana 
2012-03-20 | E-GEOD-33719 | biostudies-arrayexpress
TranscriptomicsThe effects of TGM1 Mutations in HEK293T and HaCaT cells
Autosomal recessive congenital ichthyosis (ARCI) is a group of rare inherited skin disorders characterized by remarkable hyperkeratosis. Transglutaminase 1 (TGM1) mutations have been reported to be involved in four different phenotypes of ARCI, including lamellar ichthyosis (LI), non-bullous congeni...
ORGANISM(S): Homo sapiens 
2015-12-31 | E-GEOD-70859 | biostudies-arrayexpress
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