Kang U U - OmicsDI

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Unknown (866)
Transcriptomics (56)
Genomics (24)
Proteomics (17)
Metabolomics (16)

Organisms

Homo sapiens (46)
Mus musculus (22)
Arabidopsis thaliana (6)
Ogataea angusta (3)
Saccharomyces cerevisiae (3)
Locusta migratoria (2)
Schizosaccharomyces pombe (2)
Rattus norvegicus (2)
Escherichia coli SE15 (1)
unidentified microorganism (1)
environmental samples (1)
human gut metagenome (1)
Limosilactobacillus mucosae LM1 (1)
Mycobacterium tuberculosis (1)
Sus scrofa domesticus (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (64)
MetaboLights (16)
EGA (14)
pride (14)
MassIVE (3)
geo (1)
ENA (1)

Tissue

Cell culture (5)
Epithelial cell (3)
Stem cell (2)
B cell (1)
Colon (1)
Cotyledon (1)
Hepatocyte (1)
Liver (1)
Lymph node (1)
Primary cell (1)
Root (1)
Seedling (1)

Disease

Hepatocellular carcinoma-non tumorous region (1)
Bone cancer (1)
Colon cancer (1)
Disease free (1)
Systemic lupus erythematosus (1)
Type 2 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass spectrometry (14)
Mass Spectrometry (14)
Shotgun proteomics (7)
Affinity purification coupled with mass spectrometry proteomics (3)
NMR spectroscopy (2)
Data-dependent acquisition (2)
Gel-based experiment (2)
Illumina HumanExome-12v1_A-GenCall, zCall, GenoSNP, - Illuminus (1)
Mass spectrometry assay (1)
All-ion fragmentation (1)
Bottom-up proteomics (1)
Data-independent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (9)
Liquid Chromatography MS - negative - reverse phase (6)
Illumina HiSeq 2000 (2)
Orbitrap Exploris 480 (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Agilent 6546 QTOF (1)
Bruker (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)
Nuclear Magnetic Resonance (NMR) - (1)
Varian (1)

Publication Date

2015 (13)
2013 (11)
2012 (11)
2014 (10)
2023 (10)
2010 (6)
2011 (5)
2009 (5)
2024 (5)
2025 (5)
2016 (4)
2020 (4)
2019 (2)
2022 (2)
2018 (2)
2008 (1)
2017 (1)

CHEBI ID

CHEBI:16359 (6)
CHEBI:15354 (4)
CHEBI:15428 (4)
CHEBI:15756 (4)
CHEBI:15891 (4)
CHEBI:16414 (4)
CHEBI:16977 (4)
CHEBI:17191 (4)
CHEBI:17203 (4)
CHEBI:17295 (4)
CHEBI:17895 (4)
CHEBI:18012 (4)
CHEBI:28044 (4)
CHEBI:28631 (4)
CHEBI:28716 (4)
CHEBI:28842 (4)
CHEBI:28865 (4)
CHEBI:30769 (4)
CHEBI:30915 (4)
CHEBI:32365 (4)
CHEBI:33508 (4)
CHEBI:42504 (4)
CHEBI:15603 (3)
CHEBI:15724 (3)
CHEBI:15741 (3)
CHEBI:15887 (3)
CHEBI:16015 (3)
CHEBI:16196 (3)
CHEBI:16235 (3)
CHEBI:16335 (3)

Metabolite Name

L-Tyrosine (4)
Cholic acid (3)
Indoleacetic acid (3)
Kynurenic acid (3)
L-Glutamine (3)
L-Histidine (3)
L-Phenylalanine (3)
L-Serine (3)
Malic acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1,11-Undecanedicarboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Aminocyclopropanecarboxylic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
4-Methoxycinnamic acid (2)
4-Pyridoxic acid (2)
9(10)-EpOME (2)
Ascorbyl palmitate (2)
Caproic acid (2)
Caprylic acid (2)
Citramalic acid (2)
Dopamine (2)
Elaidic acid (2)
Fumaric acid (2)
Genistein (2)
Histamine (2)
Homocysteine (2)
Hydrocinnamic acid (2)

First Public Date

2014 (1)

Study type

Transcription profiling by array (36)
RNA-seq of coding RNA (8)
ChIP-seq (6)
Other (5)
Unknown experiment type (3)
Methylation profiling by high throughput sequencing (3)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (101)
2021 (99)
2022 (91)
2020 (80)
2024 (78)
2023 (78)
2018 (61)
2015 (47)
2014 (42)
2019 (42)
2016 (41)
2013 (32)
2017 (30)
2012 (29)
2009 (19)
2026 (19)
2011 (15)
2010 (10)
2008 (5)
2003 (4)
2007 (3)
2006 (1)
2005 (1)
2004 (1)
2001 (1)

Lab affiliation

Boston Children's Hospital | Harvard Medical School (1)
Department Molekulare Systembiologie Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Permoserstraße 15 04318 Leipzig (1)
Department of Biochemistry & Pharmacology, University of Melbourne, Australia (1)
Department of Laboratory Medicine Department of Bioengineering and Therapeutic Sciences University of California, San Francisco (1)
Department of Molecular Biolgy, Princeton University, USA (1)
Department of Plant Molecular Biology, University of Lausanne, Biophore Building, DBMV, CH-1015 Lausanne, Switzerland (1)
Georg-August-University Göttingen Department of Molecular Microbiology and Genetics Institute of Microbiology and Genetics (1)
Graduate School of Medical Science and Engineering, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, 34141, Korea (1)
Harbin medical university (1)
Laboratory of Industrial Microbiology and Biotechnology, Department of Animal Resources Science, Dankook University (1)
Research and Early Development, Cardiovascular, Renal and Metabolism, BioPharmaceuticals R&D, AstraZeneca, Gaithersburg, MD, USA (1)
School of Pharmaceutical Sciences Tsinghua University (1)
Shanghai Center for Plant Stress Biology (1)
Stanford University (1)

Tags

xref:PubMed:22561152 (1)

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Antibiotics create a shift from mutualism to competition in human gut communities with a longer-lasting impact on fungi than bacteria

Background

Antibiotic treatment has a well-established detrimental effect on the gut bacterial composition, but effects on the fungal community are less clear. Bacteria in the lumen of the gastrointestinal tract may limit fungal colonization and invasion. Antibiotic drugs t...

2020-09-28 | MTBLS1846 | MetaboLights

Expression data from U-87 human glioma cells with proficient and deficient NF-кB after treatment with temozolomide

The transcription factor, NF-кB, plays a central role in the response to DNA damage. This ubiquitous family of proteins is made up of five subunits: p50 (NF-κB1, p105), p52 (NF-κB2, p100), p65 (relA), relB, and crel that appear in their mature form as dimers. Following stimulation, NF-κB dimers tran...

ORGANISM(S): Homo sapiens

2015-01-29 | E-GEOD-65363 | biostudies-arrayexpress

Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria.

Not available

S-EPMC145443 | biostudies-literature

Human PIG-U and yeast Cdc91p are the fifth subunit of GPI transamidase that attaches GPI-anchors to proteins.

Not available

S-EPMC165076 | biostudies-literature

Structural and biophysical properties of RIG-I bound to dsRNA with G-U wobble base pairs.

Not available

S-EPMC6999645 | biostudies-literature

Molecular and Functional Analysis of U-box E3 Ubiquitin Ligase Gene Family in Rice (Oryzasativa).