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GenomicsIntegrated genetic and epigenetic analysis defines novel molecular clusters in rhabdomyosarcoma
Rhabdomyosarcoma (RMS) is the most common soft tissue sarcoma in childhood. To unravel the genetic/epigenetic basis of RMS, we studied 60 RMS cases using whole exome/transcriptome sequencing, copy number (CN) profiling, and DNA methylome analysis. Based on DNA methylation patterns, RMS was clustered...
EGAS00001000884 | EGA
GenomicsRMS_Infinium450K
Infinium 450K in Rhabdomyosarcoma
EGAD00010000897 | EGA
Genomicsena-DATASET-UT-Ped-15-12-2014-06:44:14:477-357 - samples
Whole-exome sequencing in 16 RMS cases Whole-transcriptome sequencing in 8 RMS cases
EGAD00001001105 | EGA
GenomicsDepartment of Pediatrics, The University of Tokyo Data Access Committee
Data Access Committee EGAC00001000207
EGAC00001000207 | EGA
TranscriptomicsRice expression atlas (3): Early embryogenesis
Gene expression throughout the reproductive process in rice (Oryza sativa) beginning with primordia development through pollination/fertilization to zygote formation was analyzed. We analyzed 25 stages/organs of rice reproductive development including early microsporogenesis stages with 57,381 probe...
ORGANISM(S): Oryza sativa 
2010-11-11 | E-GEOD-14299 | biostudies-arrayexpress
TranscriptomicsRice expression atlas (1): Anther development
Gene expression throughout the reproductive process in rice (Oryza sativa) beginning with primordia development through pollination/fertilization to zygote formation was analyzed. We analyzed 25 stages/organs of rice reproductive development including early microsporogenesis stages with 57,381 probe...
ORGANISM(S): Oryza sativa 
2010-11-11 | E-GEOD-13988 | biostudies-arrayexpress
TranscriptomicsRice expression atlas (2): Pollination - Fertilization
Gene expression throughout the reproductive process in rice (Oryza sativa) beginning with primordia development through pollination/fertilization to zygote formation was analyzed. We analyzed 25 stages/organs of rice reproductive development including early microsporogenesis stages with 57,381 probe...
ORGANISM(S): Oryza sativa 
2010-11-11 | E-GEOD-14298 | biostudies-arrayexpress
TranscriptomicsRice expression atlas (5): Anther development (Agilent data)
Gene expression throughout the reproductive process in rice (Oryza sativa) beginning with primordia development through pollination/fertilization to zygote formation was analyzed. We analyzed 25 stages/organs of rice reproductive development including early microsporogenesis stages with 57,381 probe...
ORGANISM(S): Oryza sativa 
2010-11-11 | E-GEOD-14301 | biostudies-arrayexpress
TranscriptomicsRice expression atlas (4): Vegetative tissues
Gene expression throughout the reproductive process in rice (Oryza sativa) beginning with primordia development through pollination/fertilization to zygote formation was analyzed. We analyzed 25 stages/organs of rice reproductive development including early microsporogenesis stages with 57,381 probe...
ORGANISM(S): Oryza sativa 
2010-11-11 | E-GEOD-14300 | biostudies-arrayexpress
TranscriptomicsRice expression atlas: Plant reproductive process
Gene expression throughout the reproductive process in rice (Oryza sativa) beginning with primordia development through pollination/fertilization to zygote formation was analyzed. We analyzed 25 stages/organs of rice reproductive development including early microsporogenesis stages with 57,381 probe...
ORGANISM(S): Oryza sativa 
2010-11-11 | E-GEOD-14304 | biostudies-arrayexpress
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