Kato T T - OmicsDI

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Homo sapiens (68)
Mus musculus (32)
cellular organisms (28)
Aerococcus urinae NBRC 15544 = CCUG 36881 (23)
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Organisms

Homo sapiens (1)

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biostudies-arrayexpress (117)
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Instrument Platform

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2010 (25)
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CHEBI ID

CHEBI:17716 (2)
CHEBI:18237 (2)
CHEBI:37684 (2)
CHEBI:16811 (2)
CHEBI:28300 (2)
CHEBI:16742 (2)
CHEBI:24898 (2)
CHEBI:28875 (2)
CHEBI:28842 (2)
CHEBI:15741 (2)
CHEBI:16196 (2)
CHEBI:27266 (2)
CHEBI:61204 (2)
CHEBI:16449 (2)
CHEBI:15843 (2)
CHEBI:36005 (2)
CHEBI:17306 (2)
CHEBI:16704 (2)
CHEBI:30776 (2)
CHEBI:18012 (2)
CHEBI:30915 (2)
CHEBI:16737 (2)
CHEBI:28716 (2)
CHEBI:15756 (2)
CHEBI:17351 (2)
CHEBI:18089 (2)
CHEBI:30769 (2)
CHEBI:20067 (2)
CHEBI:176845 (1)
CHEBI:178048 (1)

Metabolite Name

Lactose (2)
Docosapentaenoic acid (2)
Valine (2)
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Creatinine (2)
Cis aconitate (1)
UDP N acetyl glucosamine (1)
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Dimethylsulfone (1)
N acetyl Glucosamine (1)
Cyanidin 3-diferuloyl sophoroside-5-glucoside (1)
Peonidin-3-caffeoyl-feruloyl sophoroside-5-glucoside (1)
Peonidin 3-caffeoyl-p-hydroxybenzoyl sophoroside-5-glucoside (1)
Peonidin 3-dicaffeoyl sophoroside-5-glucoside (1)
Cyanidin-3-caffeoyl-feruloyl sophoroside-5-glucoside (1)
Cyanidin 3-dicaffeoyl sophoroside-5-glucoside (1)
Cyanidin 3-caffeoyl-p-hydroxybenzoyl sophoroside-5-glucoside (1)
Cyanidin 3-caffeoyl sophoroside-5-glucoside (1)

First Public Date

2024 (1)

Study type

Transcription profiling by array (70)
ChIP-seq (26)
Comparative genomic hybridization by array (4)
Animal - One-color microarray (3)
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Methylation profiling by array (3)
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Release Date

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2023 (641)
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2006 (31)
2007 (28)
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2004 (16)
2000 (14)
2003 (11)
2001 (11)
1999 (11)
2002 (8)
1998 (8)
1997 (2)

Lab affiliation

School of Biochemistry, Faculty of Life Sciences, University of Bristol,UK (6)
Biomolecular characterization unit, Center for Sustainable Resource Science, RIKEN (2)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (1)
Biochemistry and molecular biology department, Universidade Federal de Goias, Brazil (1)
Buchmann Institute of Molecular Life Sciences and Institute of Biophysical Chemistry, Goethe University, Frankfurt am Main, Germany (1)
Centre de recherche du Centre Hospitalier Universitaire (CHU) de Quebec-Université Laval, Québec, QC, Canada Centre de recherche sur le cancer de l’Université Laval, Québec, QC, Canada PROTEO-Quebec Network for Research on Protein Function, Engineering, and Applications, Québec, QC, Canada Department of Molecular Biology, Medical Biochemistry and Pathology, Université Laval, Québec, QC, Canada (1)
Department of Biosciences, Univesity of Oslo (1)
Division of Biological Science Nara Institute of Science and Technology (1)
Division of Clinical Protein Science & Imaging, Department of Clinical Sciences (Lund), Department of Biomedical Engineering, Lund University, Lund, Sweden (1)
Division of Plant Environmental Responses, National Institute for Basic Biology, Japan (1)
Institute for Glyco-core Research (iGCORE), Nagoya University, Aichi, Japan (1)
Institute of Advanced Technology, Kindai University (1)
Max Planck Institut for Molecular Biomedicine Bioanalytical Mass Spectromentry Röntgenstr. 20 48149 Münster, Germany (1)
Professor of Biochemistry Chair of the Dept. of Biochemistry and Tissue Biology Head of the Laboratory of Neuroproteomics University of Campinas (UNICAMP), Brazil. (1)
REQUIMTE-LAQV, Department of Chemistry and Biochemistry, Faculty of Sciences of the University of Porto, 4169-007 Porto, Portugal (1)
School of Life Science and Technology, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, Japan (1)
Section for Evolutionary Genomics, The GLOBE Institute, University of Copenhagen, Denmark (1)

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Expression data from CD4+ NaM-CM-/ve T cells under Treg-inducing condition in the presence or absence of butyrate

Commensal bacteria shapes gut immune system. Colonization bacteria increase the frequency of regulatory T cells, however, the molecular mechanisms has not yet been unknown. To reveal the mechanism, we isolated NaM-CM-/ve CD4+ T cells from spleen of C57BL/6 mice and cultured the cells under Treg-indu...

ORGANISM(S): Mus musculus

2013-11-20 | E-GEOD-49619 | biostudies-arrayexpress

Type I Interferon induces binding of STAT1 to Bcl6: Divergent Roles of STAT-family transcription factors in the T follicular helper cell genetic program

CD4+ T follicular helper cells (TFH) are critical for the formation and function of B cell responses to infection or immunization, but also play an important role in autoimmunity. The factors that contribute to the differentiation of this helper cell subset are incompletely understood, although seve...

ORGANISM(S): Mus musculus

2014-01-22 | E-GEOD-51531 | biostudies-arrayexpress

Commensal microbe-derived butyrate epigenetically induces colonic regulatory T cells

This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

ORGANISM(S): Mus musculus

2013-11-20 | E-GEOD-49655 | biostudies-arrayexpress

Genome-wide measurement of acetylated histone H3 in naÃ¯ve cells under Treg-inducing conditon

To investigate the molecular mechanism how butyrate promoter differentiation of naÃ¯ve T cells into regulatory T cells Examination of acetylated histone H3 during the differentiation of regulatory T cells in the presence or absence of butyrate

ORGANISM(S): Mus musculus

2013-11-20 | E-GEOD-49653 | biostudies-arrayexpress

SNP data of acute promyelocytic leukemia samples

Acute promyelocytic leukemia (APL) is a hematopoietic malignant disease characterized by the chromosomal translocation t(15;17), resulting in the formation of the PML-RARA gene. Here, 47 t(15;17) APL samples were analyzed with high-density single-nucleotide polymorphism microarray (50K and 250K SNP...

ORGANISM(S): Homo sapiens

2010-04-03 | E-GEOD-14016 | biostudies-arrayexpress

Unique metabolic regulation of micromeres contributes to their inductive signaling in the sea urchin embryo

In many multicellular organisms, a group of cells called organizers plays critical roles by sending signals to adjacent cells and controlling patterning events such as embryogenesis and tissue morphogenesis. Recent studies suggest that these organizers or inductive cells facilitate the downstream...

2025-07-07 | MTBLS5017 | MetaboLights

Homo sapiens

Homo sapiens Raw sequence reads (KATO-III cell lines)

PRJNA1150275 | ENA

Comparison of naÃ¯ve, postmitotic (CD44-lo/CD62L-hi) and effector (CD44-hi/CD62L-lo) CD8+ Tcells during BMT in GVHD mice

NaÃ¯ve CD44-lo/CD62L-hi/CD8+ T cells from C3H.SW mice were compared to CD44-hi/CD82L-lo/CD8+ effector memory T cells and CD44-lo/CD62L-hi/CD8+ postmitotic T cells, using 3 biological replicates of each type of sample. The later two cells types were highly purified at day 14 after transplantation fr...

ORGANISM(S): Mus musculus

2010-06-08 | E-GEOD-13743 | biostudies-arrayexpress

O-linked glicoproteomics of gastric cancer cell lines OCUM-1, N87 and KATO-III

Gastric cancer (GC) is the third leading cause of cancer-related death worldwide, continuously requiring innovative target therapies. The sialyl-lewis A (SLeA) antigen offers tremendous potential for precise cancer targeting. This glycan is rarely expressed by healthy tissues and blood cells but is ...

ORGANISM(S): Homo sapiens (Human)

2020-05-11 | PXD016968 | Pride

Effective screening of T cells recognizing neoantigens and construction of T-cell receptor-engineered T cells.

Not available

S-EPMC5834292 | biostudies-literature

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