Kerr M M - OmicsDI

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Unknown (1554)
Transcriptomics (102)
Proteomics (45)
Genomics (22)
Genomic (1)
Multiomics (1)
Metabolomics (1)

Organisms

Schizosaccharomyces pombe (33)
Sinorhizobium meliloti BL225C (33)
Sus scrofa domesticus (33)
Saccharomyces cerevisiae (33)
Homo sapiens (27)
Arabidopsis thaliana (26)
Mus musculus (19)
Saccharomyces cerevisiae (9)
Bradyrhizobium diazoefficiens USDA 110 (3)
Bos taurus (3)
Drosophila melanogaster (3)
Bradyrhizobium japonicum (2)
Fundulus heteroclitus (2)
Rattus norvegicus (2)
Perca flavescens (1)
Saccharomyces cerevisiae W303 (1)
Salmonella enterica subsp. enterica serovar Paratyphi A (1)
Salvelinus fontinalis (1)
Picea sitchensis (1)
Gossypium barbadense (1)
Coregonus clupeaformis (1)
Gossypium hirsutum (1)
Platichthys flesus (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
Porphyromonas gingivalis (1)
Zea mays (1)
Schizosaccharomyces pombe (1)
Escherichia coli (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Danio rerio (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (118)
pride (33)
MassIVE (9)
ENA (4)
EGA (3)
dbGaP (1)
geo (1)
MetaboLights (1)
PanoramaPublic (1)

Tissue

Brain (6)
Rectum (4)
Colon (4)
Heart (3)
Cell culture (3)
Rectal cancer cell line (2)
Colonic cancer cell (2)
Colonic cancer cell line (2)
Prostate gland (2)
Breast cancer cell line (2)
Skin (2)
Blood serum (2)
Skeletal muscle (2)
Lung (2)
Kidney (2)
Liver (2)
Neutrophil (2)
Monocyte (2)
Brain cancer cell line (1)
Kidney cancer cell (1)
Renal cancer cell line (1)
Skin cancer cell (1)
Cecum cancer cell line (1)
Liver cancer cell (1)
Blood cancer cell (1)
Cytotoxic T-lymphocyte (1)
Cervical cancer cell line (1)
Prostate cancer cell (1)
Ovary cancer cell line (1)
Frontal lobe (1)

Disease

Colon cancer (4)
Rectum cancer (3)
Colon adenocarcinoma (2)
Breast cancer (2)
Disease free (2)
Gray platelet syndrome (2)
Acute leukemia (2)
Colorectal carcinoma (1)
Prostate adenocarcinoma (1)
Prostate cancer (1)
Myocardial ischemia (1)
Malignant neoplasm of ovary (1)

Technology Type

Mass Spectrometry (33)
Shotgun proteomics (17)
SWATH MS (6)
Bottom-up proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (3)
Data-independent acquisition (2)
ILLUMINA, Illumina Genome Analyzer IIx, Illumina HiSeq 2500 (1)
Mass spectrometry (1)
HDMSE (1)
Data-dependent acquisition (1)

Instrument Platform

LTQ Orbitrap Velos (4)
Q Exactive (4)
NextSeq 500 (3)
AB SOLiD 4 System (1)
AB SOLiD System 3.0 (1)
GenePix Professional 4200A [Axon Instruments] (1)
Scanning hardware (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
LTQ (1)
LTQ Orbitrap Elite (1)
Xevo G2 QTOF (Waters) (1)
LTQ-Orbitrap (1)

Publication Date

2011 (44)
2010 (19)
2015 (15)
2017 (12)
2014 (11)
2022 (6)
2018 (6)
2016 (6)
2012 (6)
2025 (5)
2013 (5)
2020 (5)
2021 (4)
2008 (4)
2024 (3)
2023 (3)
2009 (2)
2007 (2)
2026 (2)
2004 (1)
2019 (1)

CHEBI ID

CHEBI:86390|CHEBI:18123 (1)
CHEBI:15603|CHEBI:18347 (1)
CHEBI:16914|CHEBI:15365 (1)
CHEBI:85235 (1)
CHEBI:91146 (1)
CHEBI:64525|CHEBI:131586 (1)
CHEBI:74669|CHEBI:86330 (1)
CHEBI:64523|CHEBI:131585 (1)
CHEBI:64424|CHEBI:131581 (1)
CHEBI:85766|CHEBI:71735 (1)
CHEBI:79110|CHEBI:86344 (1)
CHEBI:91322|CHEBI:71737 (1)
CHEBI:64516|CHEBI:131583 (1)
CHEBI:66854|CHEBI:131584 (1)
CHEBI:83717 (1)
CHEBI:86968 (1)
CHEBI:86527|CHEBI:64587 (1)
CHEBI:131438 (1)
CHEBI:65293 (1)
CHEBI:86519|CHEBI:64586 (1)
CHEBI:65292 (1)
CHEBI:86523|CHEBI:72510 (1)
CHEBI:86517 (1)
CHEBI:86515|CHEBI:72505 (1)
CHEBI:86346 (1)
CHEBI:86337 (1)
CHEBI:36021 (1)
CHEBI:4260|CHEBI:36378 (1)
CHEBI:91027 (1)
CHEBI:131443 (1)

Metabolite Name

3-Pyridylacetic acid|trigonelline (1)
L-Leucine|L-Norleucine (1)
Salicylic acid|Aspirin (1)
E-Caprolactam (1)
Phosphatidylcholine(42:7) (1)
Phosphatidylcholine(40:5) (1)
Sphingomyelin(42:3) (1)
Phosphatidylcholine(40:6) (1)
N-(15Z-tetracosenoyl)-sphinganine-1-phosphocholine (1)
Phosphatidylcholine(38:2) (1)
Phosphatidylcholine(38:3) (1)
Phosphatidylcholine(38:4) (1)
Phosphatidylcholine(38:5)|Phosphoethanolamine(41:5) (1)
1-palmitoyl-2-docosahexaenoyl-sn-glycero-3-phosphocholine (1)
Phosphatidylcholine(38:7) (1)
Sphingomyelin(41:2) (1)
Phosphatidylcholine(36:1) (1)
1,2-dioleoyl-sn-glycero-3-phosphocholine|1,2-dipetroselenoyl-sn-glycero-3-phosphocholine (1)
Sphingomyelin(40:2) (1)
Phosphatidylcholine(36:3)|Phosphoethanolamine(39:3) (1)
Phosphatidylcholine(36:5) (1)
Phosphatidylcholine(36:6) (1)
Phosphatidylcholine(34:3)|Phosphoethanolamine(37:3) (1)
Phosphatidylcholine(35:2)|Phosphoethanolamine(38:2) (1)
1-stearoyl-2-arachidonoyl-sn-glycero-3-phosphoethanolamine|C15-20:4 Phosphatidylcholine (1)
Phosphatidylcholine(35:4)|Phosphoethanolamine(38:4) (1)
C16-20:5 Phosphatidylcholine (1)
Phosphatidylcholine(34:0) (1)
Phosphatidylcholine(34:2)|Phosphoethanolamine(37:2) (1)
Phosphatidylcholine(34:3) (1)

First Public Date

2024 (3)
2016 (1)

Modification

79.966331 (1)
42.010565 (1)
15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (57)
ChIP-chip by tiling array (19)
ChIP-seq (9)
RNA-seq of coding RNA (9)
Comparative genomic hybridization by array (7)
Methylation profiling by high throughput sequencing (6)
Unknown experiment type (3)
ChIP-chip by array (2)
RNA-seq of non coding RNA (2)
Proteomic profiling by mass spectrometer (1)
Antigen profiling (1)
Other (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (180)
2023 (164)
2021 (162)
2022 (154)
2024 (146)
2020 (115)
2018 (98)
2019 (96)
2015 (81)
2017 (79)
2011 (74)
2016 (66)
2014 (62)
2013 (48)
2012 (42)
2010 (34)
2026 (22)
2009 (20)
2008 (12)
2007 (6)
2005 (4)
2006 (2)
2004 (1)
2003 (1)
2000 (1)
1999 (1)
1994 (1)

Lab affiliation

Chair of Proteomics and Bioanalytics, Technische Universität München, Germany (3)
Medical University of Vienna (2)
The University of Queensland, Queensland Alliance for Agriculture and Food Innovation, Centre for Animal Science (1)
The University of Queensland, Queensland Alliance for Agriculture and Food innovation, Centre for Animal Science (1)
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen (Denmark) (1)
Department of Biosciences and Nutrition, Karolinska Institutet (1)
Stoller Biomarker Discovery Centre, University of Manchester, United kingdom (1)
Taussig Cancer Institute of Cleveland Clinic Foundation (1)
Associate Professor of Genetics Stanford University USA (1)
Debora Bonenfant, Novartis Institutes for Biomedical Research, Basel, Switzerland (1)
European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI) (1)
Centre for Animal Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Australia (1)
Queensland Alliance for Agriculture and Food Innovation, University of Queensland (1)
Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver BC, Canada (1)
Discovery Proteomics Facility University of Oxford (1)
Department of Inflammation and Immunity, Gastroenterology and Hepatology. Cleveland Clinic, Cleveland Ohio (1)
Institute for Diabetes and Obesity, Helmholtz Zentrum München, Neuherberg, Germany. and German Center for Diabetes Research (DZD), Neuherberg, Germany;d German Center for Diabetes Research, Neuherberg, Germany (1)
University of Oslo (1)
Michael Smith Laboratories, University of British Columbia, Vancouver, BC, Canada (1)
Institute of Structural and Molecular Biology, University College London, London, United Kingdom (1)
SynthSys – Synthetic and Systems Biology (1)
MRC-University of Glasgow Centre for Virus Research, Sir Michael Stoker Building, Garscube Campus, 464 Bearsden Road, Glasgow G61 1QH, Scotland (UK) (1)
Stanford University (1)
Novartis Inst. for BioMedical Research (1)
Department of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin, Ireland. (1)
Biochemistry and Molecular Biology, University of British Columbia, Canada (1)
Australian Infectious Diseases Research Centre and School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 USA (1)
UW Medicine Diabetes Institute, University of Washington, Seattle, WA 98109 (1)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. Otto-Hahn-Straße 6b 44227 Dortmund, Germany P: +49 (0)2 31.13 92-100 F: +49 (0)2 31.13 92-200 www.isas.de (1)

Tags

xref:PubMed:26909577 (1)

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Chaotic behavior, sensitivity analysis and Jacobian elliptic function solution of M-fractional paraxial wave with Kerr law nonlinearity.

Not available

S-EPMC11844848 | biostudies-literature

Maternal inhalation of surface-coated nano-sized titanium dioxide (UV-Titan): Effects in prenatally exposed offspring on hepatic DNA damage and gene expression

In the present study we investigate the effect of maternal pulmonary exposure to titanium dioxide (UV-Titan designed for use in the paint and lacquer industry) on prenatally exposed offspring. Time-mated mice (C57BL/6BomTac) were exposed by inhalation for 1 h/day to 42 mg UV-titan/m3 aerosolized pow...

ORGANISM(S): Mus musculus

2012-03-19 | E-GEOD-29067 | biostudies-arrayexpress

Genomic and physiological responses to strong selective pressure during late organogenesis: how natural Fundulus heteroclitus populations cope with persistent environmental pollution Superfund Site

This study explores the synergistic effects of two model PAHs, an aryl hydrocarbon receptor (AHR) agonist (M-NM-2-naphthoflavone) and a cytochrome P4501A (CYP1A) inhibitor (M-NM-1-naphthoflavone), on gene expression in stage 31 embryos from two different population. One population (Elizabeth River ...

ORGANISM(S): Fundulus heteroclitus

2013-09-30 | E-GEOD-47654 | biostudies-arrayexpress

localization of Scc2 between wild type and scc4-m35 cells in S-phase

Wild-type (AM15307) and scc4-m35 (AM15311) cells carrying SCC2-3FLAG were fixed for 2 hr, 15 min following an a-factor arrest. Samples were harvested, anti-HA ChIP was performed and both input and IP samples were sequenced for both strains. ChIP-seq for S. cerevisiae Scc2-3FLAG in S-phase cells in W...

ORGANISM(S): Saccharomyces cerevisiae

2016-07-21 | E-GEOD-70316 | biostudies-arrayexpress

Observation of Kerr soliton microcomb locked with a phonon laser.

Not available

S-EPMC12758527 | biostudies-literature

Coherent terabit communications with microresonator Kerr frequency combs.

Not available

S-EPMC4028627 | biostudies-literature

Monolithic lithium niobate photonic circuits for Kerr frequency comb generation and modulation.

Not available

S-EPMC6395685 | biostudies-literature

High-efficiency and broadband Kerr comb generation in normal-dispersion x-cut lithium niobate microresonators.