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TranscriptomicsTranscription profiling of rice plants infected by rice dwarf virus
We investigated changes in gene expression in rice plants exposed to RDV to gain some insight into the fundamental physiological and biochemical changes that are induced by viral infection, in the hope of finding clues that might help to control the viral disease. An analysis, using microarrays, of ...
ORGANISM(S): Oryza sativa 
2008-06-13 | E-GEOD-5286 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of rice stripe virus-infected rice
Rice stripe virus (RSV) is one of the major virus diseases of rice in East Asia. Rice plants infected with RSV usually show symptoms such as chlorotic leaf stripes, weakness and senescence of leaves, and dwarfism. In order to characterize the host response to RSV infection at the gene expression lev...
ORGANISM(S): Oryza sativa Japonica Group 
2009-09-01 | E-GEOD-12681 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of indica rice cultivar IET8585 (Ajaya) infected with bacterial leaf blight pathogen (Xoo)
An indica rice cultivar IET8585 (Ajaya), resists diverse races of the Xanthomonas oryzae pv oryzae (Xoo) pathogen attack, and is often cultivated as bacterial leaf blight (blb) resistant check in India. Earlier we reported a recessive blb resistance gene mapped to the long arm of chromosome 5 in IET...
ORGANISM(S): Oryza sativa (indica cultivar-group) 
2008-06-14 | E-GEOD-6244 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of indica rice cultivar FR13A under submergence treatment.
An indica rice cultivar FR13A, is widely grown as submergence tolerant variety and can withstand submergence up to two weeks. The tolerance is governed by a major QTL on chromosome 9 and represented as sub1. Recently the gene for sub1 has been mapped and cloned. However, the trait is governed by sev...
ORGANISM(S): Oryza sativa (indica cultivar-group) 
2008-06-14 | E-GEOD-6362 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of rice (Oryza sativa cv.TW16) in relation to infection with rice tungro spherical virus (RTSV)
Rice tungro disease is caused by the interaction between Rice tungro spherical virus (RTSV) and Rice tungro bacilliform virus. Infection with RTSV alone does not result in any distinctive symptoms in TW16 that is one of RTSV resistant indica rice. To elucidate the basis of asymptomatic response of r...
ORGANISM(S): Oryza sativa Indica Group 
2010-05-18 | E-GEOD-16140 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of rice (Oryza sativa cv. Taichung Native 1) in relation to infection with RTSV
Rice tungro disease is caused by the interaction between Rice tungro spherical virus (RTSV) and Rice tungro bacilliform virus. Infection with RTSV alone does not result in any distinctive symptoms in Taichung Native 1 (TN1) that is one of RTSV susceptive indica rice cultivar. To elucidate the basis ...
ORGANISM(S): Oryza sativa Indica Group 
2010-05-18 | E-GEOD-16141 | biostudies-arrayexpress
TranscriptomicsInfluence of Cochliobolus miyabeanus and silicon on gene expression in rice leaves (Oryza sativa L.)
Although Cochliobolus miyabeanus is an important fungal leaf pathogen on rice plants worldwide, it is largely neglected by molecular plant phytopathologists. To shed new light on the molecular and genetic basis of the rice M-bM-^@M-^S C. miyabeanus interaction, we compared the transcriptome of rice ...
ORGANISM(S): Oryza sativa 
2014-02-25 | E-GEOD-55330 | biostudies-arrayexpress
TranscriptomicsThe gene responses of the rice plant treated with both continuous simulated acid fog (pH3.0) and natural fog (pH5.6) treatments
Rice plants cultivated on mountain areas are frequently exposed to acid fog and natural fog events. In this report, we analyzed the expression profiles of the rice plant with acid fog (SiAF) or neutral fog (SiNF) treatment for 1 and 7 days. Microarray results suggested that ROS generation was induce...
ORGANISM(S): Oryza sativa Japonica Group 
2012-06-30 | E-GEOD-31196 | biostudies-arrayexpress
TranscriptomicsGRH-inducible genes in rice plants
The green rice leafhopper (GRH), Nephotettix cincticeps Uhler, is a major insect pest of cultivated rice in temperate Asia. GRH2-near-isogenic line (NIL) TGRH11, GRH4-NIL (TGRH16) and GRH2/GRH4-pyramided line (PYL) TGRH29 were developed by introducing the GRH2 and GRH4 from indica rice (DV85). We id...
ORGANISM(S): Oryza sativa 
2016-04-02 | E-GEOD-46409 | biostudies-arrayexpress
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