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TranscriptomicsTranscription profiling of 4 prostate cancer cell lines treated with the DNA methyltransferase inhibitor 5-aza-dC
This microarray dataset accompanies the publication by Kim et al, "The retinoic acid synthesis gene ALDH1a2 is a candidate tumor suppressor in prostate cancer". The dataset comprises four prostate cancer cell lines treated with the DNA methyltransferase inhibitor 5-aza-dC. For each cell line, gene...
ORGANISM(S): Homo sapiens 
2005-10-18 | E-SMDB-3416 | biostudies-arrayexpress
TranscriptomicsProstate_5azadC
This microarray dataset accompanies the publication by Kim et al, "The retinoic acid synthesis gene ALDH1a2 is a candidate tumor suppressor in prostate cancer". The dataset comprises four prostate cancer cell lines treated with the DNA methyltransferase inhibitor 5-aza-dC. For each cell line, gene...
ORGANISM(S): Homo sapiens 
2010-07-01 | E-GEOD-2932 | biostudies-arrayexpress
MetabolomicsELAPOR1 induces the classical/progenitor subtype and contributes to reduced disease aggressiveness through metabolic reprogramming in pancreatic cancer
Pancreatic ductal adenocarcinoma (PDAC) is a heterogeneous disease with distinct molecular subtypes described as classical/progenitor and basal-like/squamous PDAC. We hypothesized that integrative transcriptome and metabolome approaches can identify candidate genes whose inactivation contributes to ...
2024-04-02 | MTBLS9418 | MetaboLights
TranscriptomicsGlobal gene expression by Bacillus anthracis during growth in mammalian blood
Comparison of gene expression between bovine blood and culture media
ORGANISM(S): Bacillus anthracis str. Sterne 
2015-08-18 | E-MTAB-3828 | biostudies-arrayexpress
TranscriptomicsHuman embryonic stem cells with biological and epigenetic characteristics similar to those of mouse ESCs
Human and mouse embryonic stem cells (ESCs) are derived from blastocyst stage embryos but have very different biological properties, and molecular analyses suggest that the pluripotent state of human ESCs isolated so far corresponds to that of mouse derived epiblast stem cells (EpiSCs). Here we rewi...
ORGANISM(S): Homo sapiens 
2010-05-07 | E-GEOD-21222 | biostudies-arrayexpress
UnknownPredictability and parallelism in the contemporary evolution of hybrid genomes.
Not available
S-EPMC8794199 | biostudies-literature
TranscriptomicsOvarian Cancer CGH
OBJECTIVES: Amplification of the 11q13 locus is commonly observed in a number of human cancers including both breast and ovarian cancer. Cyclin D1 and EMS1 have been implicated as candidate oncogenes involved in the emergence of amplification at this locus. Detailed analysis of the 11q13 amplicon in...
ORGANISM(S): Homo sapiens 
2010-06-25 | E-GEOD-16408 | biostudies-arrayexpress
TranscriptomicsDNA methylation data from mouse iPS cells, ES cells, and ntES cells
Genome-wide DNA methylation was studied to determine whether iPS cells retain epigenetic memory at loci associated with its tissue of origin. We used custom Nimblegen microarrays to determine the genome-wide DNA methylation in mouse iPS cells. We isolated genomic DNA from mouse stem cells and hybrid...
ORGANISM(S): Mus musculus 
2010-07-19 | E-GEOD-22851 | biostudies-arrayexpress
UnknownHeme bioavailability and signaling in response to stress in yeast cells.
Not available
S-EPMC6093230 | biostudies-literature
ProteomicsDepletion Assisted Hemin Affinity (DAsHA) Proteomics Reveals an Expanded Landscape of Heme Binding Proteins in the Human Proteome
Heme b (iron protoporphyrin IX) plays important roles in biology as a metallocofactor and signaling molecule. However, the targets of heme signaling and the network of proteins that mediate the exchange of heme from sites of synthesis or uptake to heme dependent or regulated proteins are poorly unde...
ORGANISM(S): Homo sapiens (Human) 
2023-05-10 | PXD037165 | Pride
Heme Heme trafficking Proteomics Heme binding protein Cell stress Heme affinity Hemin agarose Labile heme pool 
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