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UnknownDeep Learning-Based Survival Analysis Identified Associations Between Molecular Subtype and Optimal Adjuvant Treatment of Patients With Gastric Cancer.
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S-EPMC6873983 | biostudies-literature
TranscriptomicsTranscription profiling of Arabidopsis polysomal and non-polysomal RNA samples isolated from 10-day-old wild-type and eif3h mutant plants
Microarray comparisons of polysome loading in wild-type Arabidopsis and eif3h mutant; Goal: ; To find the target mRNAs that are translationally regulated by eIF3h. BACKGROUND: The eukaryotic translation initiation factor eIF3 has multiple roles during the initiation of translation of cytoplasmic mRN...
ORGANISM(S): Arabidopsis thaliana 
2008-06-14 | E-GEOD-6024 | biostudies-arrayexpress
TranscriptomicsIMR90_SeV
Global run-on sequencing analysis of human fetal lung fibroblasts uninfected and infected with Sendai virus for 6 hour was performed to define key transcriptional changes that were induced upon infection at 6 hour time point.
ORGANISM(S): Homo sapiens 
2014-10-28 | E-MTAB-2233 | biostudies-arrayexpress
Transcriptomicseif3k/WT polysome loading
To understand the contribution of the k subunit of eukaryotic transcription factor 3 (eif3k) to the translation of specific mRNAs, we compared the polysome loading states and overall transcript levels of wild type Arabidopsis and the eif3k T-DNA insertion mutant by Affymetrix arrays. We analyzed the...
ORGANISM(S): Arabidopsis thaliana 
2011-03-29 | E-GEOD-28223 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis eif3h mutants vs. wild type
Microarray comparisons of transcript level in wild-type Arabidopsis and eif3h mutant plants. Goal:; To detect any change in transcript level between WT and eif3h mutant. BACKGROUND: The eukaryotic translation initiation factor eIF3 has multiple roles during the initiation of translation of cytoplasm...
ORGANISM(S): Arabidopsis thaliana 
2008-06-14 | E-GEOD-6025 | biostudies-arrayexpress
ModelsKim2007_CellularMemory_AsymmetricModel
This model is from the article: Interlinked mutual inhibitory positive feedbacks induce robust cellular memory effects. Kim TH, Jung SH, Cho KH FEBS Lett.2007 Oct; 581(25) 17892872, Abstract: Mutual inhibitory positive feedback (MIPF),...
2024-09-02 | BIOMD0000000179 | BioModels
ModelsKim2007_CellularMemory_SymmetricModel
This model is from the article: Interlinked mutual inhibitory positive feedbacks induce robust cellular memory effects. Kim TH, Jung SH, Cho KH FE...
2024-09-02 | BIOMD0000000180 | BioModels
TranscriptomicsE. coli BW25113 K-12 hfq vs. wild-type persister
Persisters are cells which evade stresses like antibiotics and which are characterized by reduced metabolism and a lack of genetic alterations required to achieve this state. We showed previously that MqsR and MqsA of Escherichia coli are a toxin-antitoxin pair that influence cell physiology (e.g.,...
ORGANISM(S): Escherichia coli 
2009-11-07 | E-GEOD-18852 | biostudies-arrayexpress
ModelsHong2004 - Genome-scale metabolic network of Mannheimia succiniciproducens (iSH335)
Hong2004 - Genome-scale metabolic network of Mannheimia succiniciproducens (iSH335) This model is described in the article: The genome sequence of the capnophilic rumen bacterium Mannheimia succiniciproducens. Hong SH, Kim JS, Lee SY, In YH, Choi SS, Rih JK, Kim CH, Jeong H, Hur...
2015-07-30 | MODEL1507180025 | BioModels
Transcriptomicshistone deacetylase inhibition of BT474
breast cancer cell line BT474 were treated with TSA or vehicle (DMSO) for 4 hours
ORGANISM(S): Homo sapiens 
2012-11-30 | E-MTAB-666 | biostudies-arrayexpress
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