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TranscriptomicsmicroRNA expressions in gastric cancer
The study was undertaken to identify microRNAs differently expressed by intestinal type of gastric cancer using miRNA microarray. The miRNA expression in the intestinal type of gastric cancer depending on H. pylori infection suggest that different gastric cancer pathogenesis could be exist between H...
ORGANISM(S): Homo sapiens 
2014-01-25 | E-GEOD-54397 | biostudies-arrayexpress
TranscriptomicsAnalysis of gut microbiota by pyrosequencing of 16S rRNA gene in F344 rats
Chronic acid suppression by proton pump inhibitor (PPI) has been hypothesized to alter the gut microbiota via a change in intestinal pH. To evaluate the changes in gut microbiota composition by long-term PPI treatment. Twenty-four week old F344 rats were fed with (n = 5) or without (n = 6) lansopraz...
ORGANISM(S): rat gut metagenome 
2015-04-14 | E-GEOD-67800 | biostudies-arrayexpress
TranscriptomicsChIP-chip from KG-1 cells with HIV Tat
HIV-1 Tat can modulate the expression of both HIV and cellular genes. In antigen-presenting cells Tat induces the expression of a subset of interferon-stimulated genes (ISGs) in the absence of interferons (IFNs). We investigated the genome-wide Tat association with cellular promoters in immature den...
ORGANISM(S): Homo sapiens 
2013-05-31 | E-GEOD-42191 | biostudies-arrayexpress
GenomicsHomo sapiens
microRNA expressions in gastric cancer
PRJNA236391 | ENA
Genomicshuman gut metagenome
Analysis of gastric microbiota by pyrosequencing in Korea
PRJNA261299 | ENA
TranscriptomicsAnalysis of gastric microbiota by pyrosequencing in Korea
Sequencing of 16S ribosomal RNA (rRNA) gene, which has improved the characterization of microbial community, has made it possible to detect a low level Helicobacter pylori (HP) sequences even in HP-negative subjects which were determined by a combination of conventional methods. This study was condu...
ORGANISM(S): uncultured bacterium 
2014-09-18 | E-GEOD-61493 | biostudies-arrayexpress
TranscriptomicsMethylation profiling in colorectal cancer
Methylation profiling in colorectal cancer : adjacent normal tissue vs colon tumor tissue indirect comparison experiment : CRD(common reference DNA) vs tumor-adjacent normal, CRD vs Colon tumor
ORGANISM(S): Homo sapiens 
2012-03-10 | E-GEOD-36380 | biostudies-arrayexpress
TranscriptomicsMethylation profiling in gastric cancer
Methylation profiling in gastric cancer : normal serum vs Early and Advanced cancer serum Direct comparison experiment : Normal vs EGC, Normal vs AGC
ORGANISM(S): Homo sapiens 
2012-08-17 | E-GEOD-39532 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse MH-S cell line with methylglyoxal induces apoptosis and immune response
Mycobacteria-induced apoptosis of macrophages plays an important role in modulation of the host immune response involving TNF-alpha as major cytokine. The underlying mechanisms are still ill-defined. Here, we show for the first time that methylglyoxal (MG) and AGEs levels were elevated during mycoba...
ORGANISM(S): Mus musculus 
2008-06-12 | E-GEOD-3837 | biostudies-arrayexpress
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