Kluyveromyces - OmicsDI

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Unknown (494)
Genomics (199)
Transcriptomics (57)
Proteomics (17)
Models (3)
Other (3)
Metabolomics (3)

Organisms

Kluyveromyces lactis (45)
Saccharomyces cerevisiae (24)
Naumovozyma castellii (14)
Nakaseomyces glabratus (12)
Kluyveromyces marxianus (10)
Andropogon gerardi (10)
Bacteria (10)
Lachancea waltii (9)
Schizosaccharomyces pombe (8)
Candida albicans (7)
Vanderwaltozyma polyspora (6)
Debaryomyces hansenii (6)
Saccharomyces paradoxus (6)
Saccharomyces x bayanus (4)
Yarrowia lipolytica (4)
Lachancea kluyveri (3)
Lachancea kluyveri NRRL Y-12651 (3)
Kluyveromyces lactis NRRL Y-1140 (3)
Saccharomyces mikatae (3)
Schizosaccharomyces japonicus (3)
Dickeya solani (2)
Lachancea thermotolerans (1)
Zygosaccharomyces rouxii (1)
Henningerozyma blattae (1)
Kluyveromyces wickerhamii (1)
Kluyveromyces lactis x Kluyveromyces marxianus (1)
Kluyveromyces lactis x Kluyveromyces wickerhamii (1)
Penicillium chrysogenum (1)
Saccharomyces kudriavzevii (1)
Schizosaccharomyces octosporus (1)

Organisms

Kluyveromyces marxianus (65)
Kluyveromyces lactis (23)
Kluyveromyces marxianus DMKU3-1042 (6)
Lachancea waltii (3)
Vanderwaltozyma polyspora (3)
Saccharomyces cerevisiae (3)
Dickeya solani (2)
Kluyveromyces dobzhanskii (2)
Kluyveromyces lactis NRRL Y-1140 (1)
Debaryomyces hansenii CBS767 (1)
Kazachstania africana (1)
Kluyveromyces wickerhamii UCD 54-210 (1)
Kluyveromyces aestuarii ATCC 18862 (1)
Kluyveromyces marxianus var. marxianus (1)
Yarrowia lipolytica CLIB122 (1)
Kluyveromyces starmeri (1)
Kluyveromyces marxianus CBS 712 (1)
Kluyveromyces (1)
Kluyveromyces nonfermentans (1)
Kluyveromyces wickerhamii (1)
Kluyveromyces aestuarii (1)
Nakaseomyces glabratus CBS 138 (1)
Kluyveromyces sp. NI_18 (1)
Ogataea parapolymorpha (1)
Lachancea thermotolerans (1)
Naumovozyma castellii (1)
Kluyveromyces sp. (1)
Penicillium chrysogenum (1)
Lachancea fermentati (1)
Bacillus subtilis (1)

Repository

ENA (186)
geo (48)
biostudies-arrayexpress (25)
pride (10)
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iProX (1)

Tissue

Cell culture (3)
Diploid cell (1)

Technology Type

Mass Spectrometry (10)
Shotgun proteomics (7)
Mass spectrometry (2)
Gel-based experiment (2)
Mass spectrometry assay (1)
Bottom-up proteomics (1)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 2500 (2)
Intel Xeon E5-2660) HP ProLiant SL230s Gen8 (1)
Orbitrap Astral (1)
Orbitrap Eclipse (1)
Orbitrap Fusion ETD (1)
LECO Pegasus 4D GCxGC-TOF-MS (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2010 (13)
2012 (11)
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2016 (7)
2020 (7)
2017 (6)
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2014 (4)
2011 (4)
2019 (3)
2022 (2)
2009 (2)
2025 (2)
2023 (1)

UNIPROT ID/AC

2A5D_YEAST (2)
2AAA_YEAST (2)
2ABA_YEAST (2)
3HAO_YEAST (2)
6P21_YEAST (2)
6PGD1_YEAST (2)
AAKG_YEAST (2)
AAP1_YEAST (2)
AATC_YEAST (2)
AATM_YEAST (2)
AB140_YEAST (2)
ABF1_KLULA (2)
ABF1_YEAST (2)
ABF2_YEAST (2)
ABP1_YEAST (2)
ACA2_YEAST (2)
ACAC_YEAST (2)
ACBP_YEAST (2)
ACE2_YEAST (2)
ACEA_KLULA (2)
ACF4_YEAST (2)
ACH1_YEAST (2)
ACL4_YEAST (2)
ACM1_YEAST (2)
ACO1_YEAST (2)
ACON2_YEAST (2)
ACON_YEAST (2)
ACS1_KLULA (2)
ACS1_YEAST (2)
ACS2_KLULA (2)

CHEBI ID

CHEBI:37671 (2)
CHEBI:61930 (1)
CHEBI:16698 (1)
CHEBI:57251 (1)
CHEBI:72001 (1)
CHEBI:139121 (1)
CHEBI:18323 (1)
CHEBI:28479 (1)
CHEBI:15642 (1)
CHEBI:16268 (1)
CHEBI:53027 (1)
CHEBI:53026 (1)
CHEBI:134399 (1)
CHEBI:84755 (1)
CHEBI:84760 (1)
CHEBI:28179 (1)
CHEBI:28619 (1)
CHEBI:57388 (1)
CHEBI:11812 (1)
CHEBI:11596 (1)
CHEBI:77740 (1)
CHEBI:17164 (1)
CHEBI:74393 (1)
CHEBI:77802 (1)
CHEBI:35621 (1)
CHEBI:58680 (1)
CHEBI:74631 (1)
CHEBI:15593 (1)
CHEBI:132957 (1)
CHEBI:74604 (1)

Metabolite Name

Propyl acetate (2)
Phenylacetaldehyde (2)
Isobutyl acetate (2)
Isoamyl acetate (2)
Ethyl isobutyrate (2)
Ethyl acetate (2)
Acetoin (2)
Octanal (2)
2-octanone (2)
2-methylbutyl acetate (2)
Nonanal (2)
Ethyl propionate (2)
5-chlorooctylacetate (1)
(2E)-1,4-dimethoxybut-2-en-1-yl acetate (1)
2-(3-pyridyl)-3-(4-toluenesulfonamido)propylazetidine (1)
1-(2-phenethyl)imidazolidine-2,4,5-trione (1)
(trans)-3,4-oxa-2,5-dimethylhexane (1)
(RS)-3-methyl-4-{[(Z)-prop-1-enyl]oxy}butanal (1)
Ethyl 3-methylbutyl butanedioate (1)
Ethyl 2-phenylethyl dimethylmalonate (1)
Isobutyl 2-phenylethyl 2,6-pyridinedicarboxylate (1)
2-methylbutyl acetoxyacetate (1)
3-(methylthio)propyl acetate (1)
Ethyl 4-oxobutanoate (1)
1-methoxy-2-ethoxyethyl-1-furan (1)
3-ethyl-1,5-octadiene (1)
(1-methylbutyl)cyclopentane (1)
Butyl 9-decenoate (1)
3,3-dimethoxy-1-phenyl-1,2-propanedione (1)
3-ethoxypropyl acetate (1)

First Public Date

2021 (31)
2013 (27)
2026 (21)
2023 (17)
2025 (16)
2014 (15)
2024 (14)
2019 (10)
2017 (8)
2020 (7)
2018 (6)
2016 (6)
2022 (5)
2015 (3)

Modelling Approach

Constraint-based model (2)

Lab affiliation

Micalis Institute, INRA, PAPPSO, Université Paris-Saclay, Jouy-en-Josas, France. (2)
Charité Universitätsmedizin – Chariteplatz 1, 10117 Berlin (1)
Departament de Bioquímica i Biologia Molecular, Facultat de Ciències Biològiques, Universitat de València, Burjassot (València), Spain (1)
Drummond Lab, Genetics, Genomics, and Systems Biology, University of Chicago (1)
Genetics, Genomics, and Systems Biology, The University of Chicago (1)
Laboratorio di Proteomica, Metabolomica e Spettrometria di Massa - ISPAAM - Consiglio Nazionale delle Ricerche (CNR) (1)
Professor. Department of Biology and Biological Engineering, Chalmers University of Technology, SE-41296 Gothenburg, Sweden; Wallenberg Center for Protein Research, Chalmers University of Technology, SE-41296 Gothenburg, Sweden; Novo Nordisk Foundation Center for Biosustainability, Chalmers University of Technology, SE-41296 Gothenburg, Sweden; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, DK-2800 Lyngby, Denmark (1)
School of Agriculture, Meiji University (1)
VIB/KU LEUVEN Center for Microbiology (1)

IsPrivate

False (3)

Model Flag

Non Kinetic (1)

Submitter Keywords

FROG (1)

Classification

bacteria (2)
fungi (1)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (6)
RNA-seq of non coding RNA (3)
ChIP-chip by tiling array (2)
Other (2)
ChIP-seq (2)
Comparative genomic hybridization by array (1)

Release Date

2021 (45)
2022 (44)
2018 (42)
2024 (40)
2025 (39)
2023 (33)
2012 (29)
2019 (28)
2020 (25)
2017 (23)
2011 (22)
2015 (19)
2014 (18)
2013 (14)
2016 (13)
2010 (13)
2009 (9)
2007 (9)
2006 (8)
2026 (6)
2005 (6)
2004 (6)
2008 (5)
2002 (5)
2001 (5)
1999 (5)
2000 (3)
1998 (3)
2003 (2)

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An alternative, arginase-independent pathway for arginine metabolism in Kluyveromyces lactis involves guanidinobutyrase as a key enzyme

Most available knowledge on fungal arginine metabolism is derived from studies on Saccharomyces cerevisiae, in which arginine catabolism is initiated by releasing urea via the arginase reaction. Orthologs of the S. cerevisiae genes encoding the first three enzymes in the arginase pathway were cloned...

ORGANISM(S): Kluyveromyces lactis

2014-07-16 | E-GEOD-56060 | biostudies-arrayexpress

Absolute expression level of Kluyveromyces lactis genes

Total RNA versus genomic DNA hybridization on custom arrays designed for all Kluyveromyces lactis genes Total RNA was collected in mid-log phase from Kluyveromyces lactis cells grown in rich medium (abbreviated CM, in house recipe). RNA was then converted to cDNA, Cy3-labeled and hybridized compet...

ORGANISM(S): Kluyveromyces lactis

2010-07-06 | E-GEOD-22198 | biostudies-arrayexpress

Kluyveromyces

Kluyveromyces sp. overview

PRJNA172467 | ENA

Selenite treatment of a Kluyveromyces lactis wild type strain

In the frame of a multispecies project, Kluyveromyces lactis cells were treated with 0.5 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replic...

ORGANISM(S): Kluyveromyces lactis

2018-11-12 | E-MTAB-7047 | biostudies-arrayexpress

Kluyveromyces marxianus

Kluyveromyces marxianus anaerobic characterisation

PRJNA679431 | ENA

Kluyveromyces marxianus

Kluyveromyces marxianus Genome sequencing

PRJNA553996 | ENA

Kluyveromyces lactis

Absolute expression level of Kluyveromyces lactis genes

PRJNA128801 | ENA

Kluyveromyces marxianus