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TranscriptomicsTranscription profiling of Arabidopsis roots from wild type and stop1 mutant plants treated with Al or low pH
Comparison of stop1 mutant vs. wild type treated with Al or low pH, and gene expression responses to rhizotoxic ions (Al, low pH) in Arabidopsis roots.
ORGANISM(S): Arabidopsis thaliana 
2009-05-04 | E-MEXP-1908 | biostudies-arrayexpress
TranscriptomicsParalogous MarR/DUF24-family repressors YodB and CatR control expression of the catechol dioxygenase CatE in Bacillus subtilis
The redox-sensing MarR/DUF24-type repressor YodB controls expression of the azoreductase AzoR1 and the nitroreductase YodC that are involved in detoxification of quinones and diamide in Bacillus subtilis. In the present paper, we identified YodB and its paralog YvaP (CatR) as repressors of the yfiDE...
ORGANISM(S): Bacillus subtilis 
2010-06-29 | E-GEOD-22603 | biostudies-arrayexpress
TranscriptomicsExpression data for drought-, cold, high-salinity and ABA treatment in Arabidopsis plants
We applied the tiling arrays to study the Arabidopsis whole-genome transcriptome under drought, cold, high-salinity and ABA treatment conditions and idenfied many stress- or ABA- responsive putative functional RNAs and fully-overlapping sense-antisense transcripts in Arabidopsis genome. Keywords: st...
ORGANISM(S): Arabidopsis thaliana 
2008-11-19 | E-GEOD-9646 | biostudies-arrayexpress
TranscriptomicsExpression data for the mom1-2 mutant of Arabidopsis
Heterochromatin is an inert region in the genome and composed of mainly remnants of transposons and repetitive elements. In Arabidopsis, the major heterchromatin regions are present at around centromeres (pericentromeric regions) and at a region on the short arm of chromosome 4 (heterochromatin knob...
ORGANISM(S): Arabidopsis thaliana 
2010-09-26 | E-GEOD-13092 | biostudies-arrayexpress
ProteomicsTMT-based quantitative proteomics in Rab35 cKO P0 hippocampus
The hippocampi from the control (Rab35flox/+; Nestin-Cre) and Rab35 cKO mice groups at P0 (n = 5 biological replicates per genotype) were lysed in a buffer containing 6 M guanidine hydrochloride, 100 mM HEPES-NaOH (pH 8.0), 10 mM TCEP, and 40 mM chloroacetamide. The lysates were dissolved through he...
ORGANISM(S): Mus Musculus (mouse) 
2023-04-07 | PXD041290 | JPOST Repository
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