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TranscriptomicsThe role of Ldb1 in hemangioblast development: genome-wide analysis shows that Ldb1 controls essential hematopoietic genes/pathways in mouse early development and reveals novel players in hematopoiesis (sequencing)
The first site exhibiting hematopoietic activity in mammalian development is the yolk sac blood island, which originates from the hemangioblast. Here we performed differentiation assays, as well as genome-wide molecular and functional studies in BL-CFCs to gain insight into the function of the essen...
ORGANISM(S): Mus musculus 
2013-02-09 | E-GEOD-43041 | biostudies-arrayexpress
TranscriptomicsThe role of Ldb1 in hemangioblast development: genome-wide analysis shows that Ldb1 controls essential hematopoietic genes/pathways in mouse early development and reveals novel players in hematopoiesis (Affymetrix)
The first site exhibiting hematopoietic activity in mammalian development is the yolk sac blood island, which originates from the hemangioblast. Here we performed differentiation assays, as well as genome-wide molecular and functional studies in BL-CFCs to gain insight into the function of the essen...
ORGANISM(S): Mus musculus 
2013-02-09 | E-GEOD-43042 | biostudies-arrayexpress
GenomicsGenome-wide DNA methylation profiles of non-small cell lung carcinomas and control lung tissues
Purpose: Generate genome-wide methylation profiles of non-small cell lung carcinomas (NSCLC) and their matching lung tissues for detection of hypermethylated and hypomethylated regions present in the tumors. Methods: MethylCapture followed by next-generation sequencing (Illumina GAIIx) of 7 nsclc tu...
ORGANISM(S): Homo sapiens 
2012-10-05 | E-GEOD-41343 | biostudies-arrayexpress
GenomicsChIP-Seq of Pax7 and Pax3 in myoblasts
Examination of binding locations of Pax3 and Pax7 in primary myoblasts UCSC track hub available at: http://www.ogic.ca/projects/Soleimani_2012_Pax7_hub/hub.txt For details on viewing the track hub in the UCSC Genome Browser: http://altair.dartmouth.edu/ucsc/goldenPath/help/hgTrackHubHelp.html#View...
ORGANISM(S): Mus musculus 
2012-05-22 | E-GEOD-25064 | biostudies-arrayexpress
TranscriptomicsMouse Myoblast Pax3, Pax7 overexpression and control
This data set contains 3 replicates each for a Pax7 overexpression, Pax3 overexpression and an empty vector Control Measurement of expression levels in Pax3, Pax3 overepxression and empty vector control
ORGANISM(S): Mus musculus 
2012-05-22 | E-GEOD-32266 | biostudies-arrayexpress
TranscriptomicsDeciphering the RNA landscape by RNAome sequencing [Affymetrix]
Current RNA expression profiling methods rely on enrichment steps for specific RNA classes, thereby not detecting all RNA species in an unperturbed manner. We report strand-specific RNAome sequencing that determines expression of small and large RNAs from ribosomal RNA-depleted total RNA in a single...
ORGANISM(S): Mus musculus 
2015-04-01 | E-GEOD-47888 | biostudies-arrayexpress
TranscriptomicsDeciphering the RNA landscape by RNAome sequencing [Seq]
Current RNA expression profiling methods rely on enrichment steps for specific RNA classes, thereby not detecting all RNA species in an unperturbed manner. We report strand-specific RNAome sequencing that determines expression of small and large RNAs from ribosomal RNA-depleted total RNA in a single...
ORGANISM(S): Mus musculus 
2015-04-01 | E-GEOD-48083 | biostudies-arrayexpress
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