Kondo K K - OmicsDI

OmicsDI

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Unknown (2574)
Transcriptomics (93)
Proteomics (43)
Genomics (4)
Metabolomics (2)
Multiomics (1)

Organisms

Homo sapiens (49)
Mus musculus (44)
Andropogon gerardi (19)
Bacteria (19)
Canis lupus familiaris (19)
Cnidaria (19)
Ensifer adhaerens (19)
Fasciola (19)
Human alphaherpesvirus 1 strain 17 (19)
Human alphaherpesvirus 1 strain KOS (19)
Human betaherpesvirus 5 (19)
Human herpesvirus 2 strain 186 (19)
Madurella mycetomatis (19)
Mesocricetus auratus (19)
Gluconobacter oxydans 621H (4)
cellular organisms (4)
Xenopus laevis (3)
Rattus norvegicus (3)
Escherichia coli (2)
Hymenochirus boettgeri (1)
Paralichthys olivaceus (1)
Nicotiana benthamiana (1)
Schizosaccharomyces pombe (1)
Oncorhynchus mykiss (1)
Drosophila melanogaster (1)
Komagataella phaffii (1)
Mycobacterium tuberculosis (1)
Mycolicibacterium smegmatis MC2 155 (1)
Rattus rattus (1)
Synechocystis (1)

Repository

biostudies-arrayexpress (97)
jPOST (22)
pride (19)
MassIVE (2)
MetaboLights (2)

Tissue

Cell culture (4)
Blood serum (2)
Brain (2)
Plant cell (2)
Blood (1)
Blood plasma (1)
Bone marrow (1)
Brown preadipocyte (1)
Cerebrospinal fluid (1)
Common myeloid progenitor (1)
Epithelial cell (1)
Kidney (1)
Preadipocyte (1)
Rosette (1)
Whole body (1)

Disease

Cancer (1)
Prostate cancer (1)
Alzheimer's disease (1)
Amyotrophic lateral sclerosis (1)
Leukemia (1)
Severe acute respiratory syndrome (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (19)
Shotgun proteomics (7)
Top-down proteomics (4)
Bottom-up proteomics (3)
Gel-based experiment (3)
Mass spectrometry (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
SWATH MS (1)

Instrument Platform

Agilent High resolution C scanner (4)
LTQ Orbitrap XL (1)
Q Exactive HF (1)
NEG_UPLC-QTOF-MS (1)
POS_UPLC-QTOF-MS (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2016 (23)
2014 (22)
2012 (13)
2025 (10)
2013 (8)
2026 (8)
2010 (7)
2015 (6)
2024 (6)
2009 (5)
2008 (5)
2022 (5)
2021 (4)
2017 (4)
2011 (4)
2020 (4)
2023 (3)
2019 (2)
2018 (2)
2007 (1)

CHEBI ID

CHEBI:24835 (1)
CHEBI:48591 (1)
CHEBI:39270 (1)
CHEBI:24059 (1)
CHEBI:50917 (1)
CHEBI:24402 (1)
CHEBI:32955 (1)
CHEBI:36735 (1)
CHEBI:38776 (1)
CHEBI:59659 (1)
CHEBI:38193 (1)
CHEBI:25340 (1)
CHEBI:33833 (1)
CHEBI:48835 (1)
CHEBI:77383 (1)
CHEBI:38670 (1)
CHEBI:37739 (1)
CHEBI:38314 (1)
CHEBI:38093 (1)
CHEBI:24955; CHEBI:52898 (1)
CHEBI:38976; CHEBI:36820 (1)
CHEBI:38669 (1)
CHEBI:48588 (1)
CHEBI:47985 (1)
CHEBI:23245 (1)
CHEBI:39307 (1)
CHEBI:26767 (1)
CHEBI:24436 (1)
CHEBI:22715; CHEBI:35813 (1)
CHEBI:48436 (1)

Metabolite Name

Cycloartanols and derivatives (1)
Miscellaneous mixed metal/non-metals (1)
N-acylpiperidines (1)
Naphthofurans (1)
Fluorenes (1)
Oxasteroids and derivatives (1)
Galanthamine-type amaryllidaceae alkaloids (1)
Glycosphingolipids (1)
Aristolactams (1)
Oxirane carboxylic acids and derivatives (1)
Bilirubins (1)
Imidazoquinolines (1)
Pyrenes (1)
Phenylpyridines (1)
Organic nitro compounds (1)
Methylpyridines (1)
Heteroaromatic compounds (1)
Phenanthrolines (1)
Bisphosphonates (1)
Phosphonic acid esters (1)
Pyrrolo[2,3-d]pyrimidines (1)
Glycerophospholipids (1)
Pyrazines (1)
Phenylacetylindoles (1)
Phenothiazines (1)
Macrolactams (1)
Cyclohexylphenols (1)
Pyrazolo[1,5-a]pyrimidines (1)
Peptoid-peptide hybrids (1)
Aminopiperidines (1)

Study type

Transcription profiling by array (70)
RNA-seq of coding RNA (8)
Methylation profiling by array (5)
ChIP-seq (4)
Animal - One-color microarray (3)
Other (2)
One-color microarray (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
Comparative genomic hybridization by array (1)
MicroRNA profiling by array (1)

Release Date

2025 (327)
2022 (317)
2021 (282)
2023 (281)
2024 (221)
2020 (196)
2019 (177)
2018 (137)
2017 (123)
2016 (119)
2015 (96)
2014 (82)
2013 (54)
2012 (48)
2026 (42)
2011 (33)
2010 (28)
2008 (26)
2009 (23)
2006 (15)
2007 (9)
2002 (8)
2001 (6)
2005 (4)
2004 (4)
1998 (4)
2000 (3)
1999 (3)
2003 (1)
1997 (1)

Lab affiliation

Biomolecular characterization unit, Center for Sustainable Resource Science, RIKEN (2)
1Department of Neuropathology, Medical Research Institute, Tokyo Medical and Dental University (1)
California State University Long Beach (1)
Cincinnati Children’s Hospital Medical Center (1)
Department of Life Science and Technology, Graduate School of Life Science and Technology Institute of Science Tokyo (1)
Department of Metabolic Medicine, Faculty of Life Sciences, Kumamoto University, 1-1-1 Honjo, Chuoku, Kumamoto 860-8556, Japan (1)
Department of Metabolic Medicine, Faculuty of Life Sciences, Kumamoto University, 1-1-1 Honjo, Chuoku, Kumamoto 860-8556, Japan (1)
Department of Neurology, Tokushima University Graduate School of Biomedical Sciences, Tokushima, Japan (1)
Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, United States. Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, United States. (1)
Division of Plant Environmental Responses, National Institute for Basic Biology, Japan (1)
Laboratory for Developmental Genetics, RIKEN Center for Integrative Medical Sciences (1)
Laboratory of Quantitative Biology, Department of Gene Mechanisms, Division of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Japan (1)
Plant Molecular Biology Lab, Malopolska Centre of Biotechnology, Jagiellonian University (1)
Proteomic Mass Spectrometry Wellcome Trust Sanger Institute United Kingdom (1)
Proteomics Service, CIC bioGUNE, Build. 800 Bizkaia Tech. Park, Zamudio, Spain (1)
Proteomics Unit Proteored-ISCIII Navarrabiomed, Pamplona, Spain (1)
School of Life Science and Technology, Institute of Science Tokyo (1)
School of Life Science and Technology, Tokyo Institute of Technology, Ookayama campus, Midorigaoka Building 6, Meguro, Tokyo, Japan. (1)