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TranscriptomicsTranscription profiling of Arabidopsis or Thlaspi caerulescens roots exposed to deficient, sufficient or excess zinc
A common reference model was used to design the microarray experiment, in which cDNA from T. caerulescens roots exposed to 100 uM (sufficient) zinc was used as the common reference. Every slide was always hybridized with the common reference sample and with a sample from one of the treatments (Arabi...
ORGANISM(S): Thlaspi caerulescens 
2006-10-10 | E-MEXP-877 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis Ler/Cvi recombinant inbred line popultion to assess natural variation in gene expression
To assess natural variation in gene expression in Arabidopsis thaliana, genome wide gene expression variation was analyzed in a Ler/Cvi recombinant inbred line (RIL) population.The variation in expression could be explained for many genes by expression quantitative trait loci (eQTLs). These eQTLs ar...
ORGANISM(S): Arabidopsis thaliana 
2008-01-24 | E-TABM-214 | biostudies-arrayexpress
TranscriptomicsThe footprint of polygenic adaptation on stress-responsive cis-regulatory divergence in the Arabidopsis genus
We generated F1 hybrids of each of the sister species A. halleri and A. lyrata with their outgroup relative of A. thaliana and monitored allele-specific levels of expression in standard growth conditions, in response to dehydration or cold exposure. This data allowed us to map the genome-wide distri...
ORGANISM(S): Arabidopsis thaliana x Arabidopsis halleri 
2016-06-01 | E-GEOD-80462 | biostudies-arrayexpress
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