Krieger J J - OmicsDI

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Unknown (1002)
Proteomics (25)
Genomics (2)
Transcriptomics (1)
Genomic (1)
Metabolomics (1)

Organisms

Mycobacterium tuberculosis SP7 (24)
Mycobacterium tuberculosis SP10 (24)
Mycobacterium tuberculosis SP13 (24)
Mycobacterium tuberculosis SP22 (24)
Chlamydomonas reinhardtii (24)
Enterococcus mundtii CRL35 (24)
Oncorhynchus tshawytscha (24)
Pseudomonas canadensis (24)
Pseudomonas aeruginosa PAO1H2O (24)
Human alphaherpesvirus 1 strain 17 (24)
Mycobacterium tuberculosis SP1 (24)
Marchantia polymorpha subsp. ruderalis (24)
Methylocystis sp. (24)
Exiguobacterium sp. SH31 (24)
Palaemonetes sp. common grass shrimp associated circular virus (24)
Amaranthus tricolor (24)
Spirochaeta sp. ELBA (24)
Clavibacter nebraskensis NCPPB 2581 (24)
Porites pukoensis (24)
Porphyromonas gingivalis (24)
Leishmania tarentolae (24)
Porphyromonas gingivalis W83 (24)
Human betaherpesvirus 5 (24)
Bothrops insularis (24)
Bothrops jararaca (24)
Bothrops jararacussu (24)
Bothrops cotiara (24)
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (24)
Homo sapiens (2)
Mus musculus (1)

Repository

pride (24)
EGA (2)
biostudies-arrayexpress (1)
dbGaP (1)
MassIVE (1)
MetaboLights (1)

Tissue

Cell culture (6)
Lung (3)
Epithelial cell (3)
Blood serum (2)
Permanent cell line cell (2)
Epithelial cell of lung (1)
Mammary ductal carcinoma cell (1)
Nerve cord (1)
Embryonic cell (1)
Neuron (1)
Macrophage (1)
Brain (1)
Cell suspension culture (1)
Stem cell (1)
Monocyte (1)
T cell (1)

Disease

Non-small cell lung carcinoma (2)
Lung cancer (2)
Huntington Disease (1)
Dementia (1)
Parkinson's disease (1)
Colorectal cancer (1)
Amyotrophic lateral sclerosis (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (24)
Shotgun proteomics (17)
Affinity purification coupled with mass spectrometry proteomics (5)
Bottom-up proteomics (4)
Data-independent acquisition (2)
Mass spectrometry (1)
DiaPASEF (1)
Gel-based experiment (1)
Data-dependent acquisition (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

LTQ Orbitrap Elite (1)
LTQ Orbitrap (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)

Publication Date

2022 (5)
2021 (4)
2019 (3)
2025 (3)
2016 (2)
2024 (2)
2020 (2)
2017 (2)
2013 (1)
2026 (1)
2023 (1)
2015 (1)

CHEBI ID

CHEBI:144347 (1)
CHEBI:144346 (1)
CHEBI:144345 (1)
CHEBI:144344 (1)
CHEBI:144342 (1)
CHEBI:144322 (1)
CHEBI:144341 (1)
CHEBI:144340 (1)
CHEBI:144338 (1)
CHEBI:23623 (1)
CHEBI:144337 (1)
CHEBI:144336 (1)
CHEBI:144335 (1)
CHEBI:144333 (1)
CHEBI:144331 (1)
CHEBI:144329 (1)
CHEBI:144320 (1)
CHEBI:144328 (1)
CHEBI:144327 (1)
CHEBI:144326 (1)
CHEBI:144325 (1)
CHEBI:144324 (1)
CHEBI:75892 (1)
CHEBI:46995 (1)
CHEBI:144332 (1)
CHEBI:144343 (1)
CHEBI:41094 (1)
CHEBI:144334 (1)
CHEBI:67258 (1)
CHEBI:131433 (1)

Metabolite Name

Tromethamine, 3TMS derivative (1)
Trimethylsilylpropargyl alcohol, 2TMS derivative (1)
Succinic acid, 2,2,3,3,4,4,5,5-octafluoropentyl 2-methylpent-3-yl ester (1)
Serine, 3TMS derivative (1)
Pyroglutamic acid, TMS derivative (1)
Propanoic acid, 3-[(tert-butyldimethylsilyl)oxy]-2-methyl-, tert-butyldimethylsilyl ester (1)
Propanedioic acid, 2TBDMS derivative (1)
Phthalic acid, di(3-methylphenyl) ester (1)
Phosphorylethanolamine, 4TMS derivative (1)
Phosphoric acid, bis[2,3-bis[(trimethylsilyl)oxy]propyl] trimethylsilyl ester (1)
Phosphonic acid, (aminomethyl)-, bis(trimethylsilyl) ester (1)
Phenylethyl Alcohol, TMS derivative (1)
Phenylalanine, 2TMS derivative (1)
Octanoic acid, tributylsilyl ester (1)
N-Acetyl-L-glutamic acid, 2TMS derivative (1)
N-.alpha.-Acetyl-L-Lysine, 3TMS derivative (1)
Myrtenoic acid, trimethylsilyl ester (1)
Monolaurin, 2TMS derivative (1)
Methyltris(trimethylsiloxy)silane (1)
Methylsuccinic acid, 2TMS derivative (1)
Mercaptoacetic acid, 2TMS derivative (1)
Malonic acid, bis(2-trimethylsilylethyl ester (1)
Lysine, 3TMS derivative (1)
L-Valine, TMS derivative (1)
L-Threonine, 3TMS derivative (1)
L-Serine, 2TMS derivative (1)
L-Proline, TMS derivative (1)
L-Proline, n-propargyloxycarbonyl-, propargyl ester (1)
L-Proline, 2TMS derivative (1)
L-Phenylalanine, 2TMS derivative (1)

Modification

2x(15)N labeled L-lysine (1)

Study type

Transcription profiling by array (1)

Release Date

2025 (111)
2022 (106)
2021 (102)
2023 (99)
2024 (81)
2020 (75)
2019 (74)
2018 (64)
2016 (58)
2014 (42)
2017 (41)
2015 (36)
2012 (25)
2013 (18)
2011 (17)
2026 (10)
2010 (9)
2009 (7)
2006 (6)
2004 (5)
2003 (4)
2007 (3)
2005 (3)
2008 (2)
2001 (2)
2002 (1)
2000 (1)
1999 (1)

Lab affiliation

Laboratory of Vaccines for the Developing World, Institute for Glycomics, Southport, QLD, Australia (1)
Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA (1)
Carlos Chagas Institute, Fiocruz Parana, Functional Genomics Laboratory, Brazil Carlos Chagas Institute, Fiocruz Parana, Mass Spectrometry Facility RPT02H, Brazil (1)
EF-SM-LH5, Merck KGaA (1)
Professor Director, Executive Ph.D. Program Department of Biochemistry & Molecular Biology Sylvester Comprehensive Cancer Center Miller School of Medicine University of Miami R. Bunn Gauthier Building, Rm 216 Miami, FL, 33101-6129 (1)
SPARC Biocentre, The Hospital for Sick Children, Program in Cell Biology, The Hospital for Sick Children, Department of Medical Biophysics, University of Toronto. (1)
University of South Florida, USA (1)
Department of Molecular and Cellular Biology, University of Guelph (1)
The Herbert and Jackeline Krieger Klein Alzheimer's Research Center, Brain Health Institute, Rutgers University (1)
The Donnelly Centre, University of Toronto, Toronto, ON, Canada M5S 3E1 & Department of Molecular Genetics, University of Toronto, Toronto, ON, Canada M5S 1A8 (1)
Program in Cell Biology Hospital For Sick Children, Toronto, SPARC BioCentre Hospital For Sick Children, Toronto, 8Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada (1)
Department of Chemistry, Vanderbilt University, Nashville, TN, United States (1)
Institute of Biomaterials and Biomedical Engineering, Department of Chemical Engineering, Department of Chemistry, Department of Materials Science and Engineering, University of Toronto, 164 College Street, Toronto, Ontario M5S 3G9, Canada. Terrence Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College Street, Toronto, Ontario, M5S 3E1, Canada. (1)
Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada, N1G 2W1 (1)
Biomedical Neuroscience Institute, Faculty of Medicine, University of Chile, Santiago, Chile Center for Geroscience, Brain Health and Metabolism, Santiago, Chile Program of Cellular and Molecular Biology, Institute of Biomedical Sciences, University of Chile, Santiago, Chile Buck Institute for Research on Aging, Novato, CA, USA (1)
The Michael V. Johnston Center for Developmental Neuroscience Department of Neurology Department of Pediatrics Johns Hopkins University School of Medicine Kennedy Krieger Institute (1)
Functional Genomics Laboratory, Carlos Chagas Institute, Fiocruz, Curitiba, Parana, Brazil (1)
Department of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada, N1G 2W1; bSPARC BioCentre, The Hospital for Sick Children, Toronto, ON, Canada, M5G 0A4. (1)
Molecular Genetics, University of Toronto Hospital for Sick Children, Toronto, Canada (1)
NCT Dresden (1)
The Hospital for Sick Children (1)
Hospital for Sick Children, Toronto, Ontario, Canada (1)
Program in Cell Biology, SPARC BioCentre, Hospital For Sick Children, Toronto; Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada. (1)
1.Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Quebec, Canada 2.Gerald Bronfman Department of Oncology, Jewish General Hospital, McGill University, Montreal, Quebec (1)