Krismer Bernhard B

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Transcriptomics (2)
Metabolomics (1)

Organisms

Staphylococcus aureus (2)

Repository

biostudies-arrayexpress (2)
MetaboLights (1)

Technology Type

Mass spectrometry (1)

Instrument Platform

Flow injection analysis MS - positive (1)
Liquid Chromatography MS - alternating (1)
Flow injection analysis MS - negative (1)

Publication Date

2013 (2)
2022 (1)

CHEBI ID

CHEBI:62194 (1)
CHEBI:139108 (1)
CHEBI:61425 (1)
CHEBI:48681 (1)
CHEBI:27537 (1)
CHEBI:28935 (1)
CHEBI:24549 (1)
CHEBI:28599 (1)
CHEBI:104362 (1)
CHEBI:104012 (1)
CHEBI:61958 (1)
CHEBI:42465 (1)
CHEBI:71316 (1)
CHEBI:62012 (1)
CHEBI:26900 (1)
CHEBI:63251 (1)
CHEBI:61125 (1)
CHEBI:61191 (1)
CHEBI:143010 (1)
CHEBI:50577 (1)
CHEBI:61508 (1)
CHEBI:68471 (1)
CHEBI:78948 (1)
CHEBI:15509 (1)
CHEBI:35399 (1)
CHEBI:35398 (1)
CHEBI:37318 (1)
CHEBI:77358 (1)
CHEBI:104121 (1)
CHEBI:103211 (1)

Metabolite Name

D-carnitinyl-CoA (1)
Crotonobetainyl-CoA (1)
Adenosine thiamine triphosphate (1)
6-hydroxymethyl-dihydropterin pyrophosphate (1)
Hexadecanoyl-phosphate (n-C16:0) (1)
Psicoselysine (1)
Ferric 2,3-dihydroxybenzoylserine (1)
Dihydromonapterin (1)
Tetradecenoate (n-C14:1) (1)
L-alanine-L-glutamate (1)
L-alanine-D-glutamate (1)
Cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (1)
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran (1)
5'-deoxyribose (1)
Octanoate (protein bound) (1)
3-Aminoacrylate (1)
Cyclic pyranopterin monophosphate (1)
L-ascorbate-6-phosphate (1)
Dehydroglycine (1)
Gamma-glutamyl-gamma aminobutyric acid (1)
3-keto-L-gulonate-6-phosphate (1)
2,3-dihydroxycinnamic acid (1)
Cis-3-(3-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol (1)
3-(3-hydroxy-phenyl)propionate (1)
D-Glycero-D-manno-heptose 7-phosphate (1)
Octanoate (n-C8:0) (1)
2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (1)
L-Allo-threonine (1)
Hexadecenoyl-CoA (n-C16:1CoA) (1)
Trans-Hex-2-enoyl-CoA (1)

Study type

Transcription profiling by array (2)

Release Date

2013 (2)

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Horizontal Transfer of Bacteriocin Biosynthesis Genes Requires Metabolic Adaptation To Improve Compound Production and Cellular Fitness

Biosynthetic gene clusters (BGCs) encoding the production of bacteriocins are widespread among bacterial isolates and are important genetic determinants of competitive fitness within a given habitat. Staphylococci produce a tremendous diversity of compounds, and the corresponding BGCs are frequen...

2022-11-09 | MTBLS5196 | MetaboLights

The stringent response of Staphylococcus aureus and its impact on survival after phagocytosis through the induction of intracellular PSMs expression

The stringent response is initiated by rapid (p)ppGpp synthesis, which leads to a profound reprogramming of gene expression in most bacteria. The stringent phenotype seems to be species specific and may be mediated by fundamentally different molecular mechanisms. In Staphylococcus aureus, (p)ppGpp s...

ORGANISM(S): Staphylococcus aureus

2013-04-05 | E-GEOD-45617 | biostudies-arrayexpress

Gene expression in synthetic nasal medium

Staphylococcus aureus prefers the human anterior nares as its habitat, but nothing is known about the nutritional situation in this ecological niche. Analysis of nasal secretions showed a complex mixture of nutrients at low concentration. Based on these findings a synthetic nasal medium (SNM) was co...