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UnknownA novel method for gathering and prioritizing disease candidate genes based on construction of a set of disease-related MeSH® terms.
Not available
S-EPMC4068192 | biostudies-literature
TranscriptomicsArabidopsis Me-0 vs tetraploid Col
To investigate gene expression differences related to the regulation of stomatal aperture between two Arabidopsis accessions, Me-0 and tetraploid Col, we performed microarray analysis on guard cell protoplasts from these two accessions. We identified 1,777 probes as up-regulated and 1,706 probes as ...
ORGANISM(S): Arabidopsis thaliana 
2016-01-14 | E-GEOD-71914 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of murine embryonic head Phgdh knock outs
D-3-Phosphoglycerate dehydrogenase (Phgdh; EC 1.1.1.95) is a necessary enzyme for de novo L-serine biosynthesis via the phosphorylated pathway. We demonstrated previously that Phgdh is expressed exclusively by neuroepithelium and radial glia in developing mouse brain and later mainly by astrocytes. ...
ORGANISM(S): Mus musculus 
2008-06-17 | E-GEOD-8555 | biostudies-arrayexpress
TranscriptomicsThe effect of fenofibrate on endothelial cells
Fenofibrate is a synthetic ligand for the nuclear receptor peroxisome proliferator-activated receptor (PPAR) alpha, but there are reports that fenofibrate affects endothelial cells in PPARa-independent manner. In order to identify PPARa-dependently and PPARa-independently regulated transcripts we ge...
ORGANISM(S): Homo sapiens 
2010-05-06 | E-GEOD-15483 | biostudies-arrayexpress
TranscriptomicsThe effect of PPARa siRNA on endothelial cells treated with fenofibrate
Fenofibrate is a synthetic ligand for the nuclear receptor peroxisome proliferator-activated receptor (PPAR) alpha, but there are reports that fenofibrate affects endothelial cells in PPARa-independent manner. In order to identify PPARa-dependently and PPARa-independently regulated transcripts we ge...
ORGANISM(S): Homo sapiens 
2009-08-24 | E-GEOD-15482 | biostudies-arrayexpress
UnknownWhole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection.
Not available
S-EPMC1201578 | biostudies-literature
UnknownDiabetes Caused by Elastase-Cre-Mediated Pdx1 Inactivation in Mice.
Not available
S-EPMC4758062 | biostudies-literature
TranscriptomicsGene expression levels dependent on cultivated temperature
To evaluate the gene expression levels dependent on cultivated temperature (15-degree only or 25-degree after 15-degree grown) in wild type (N2 strain) and daf-2mutant Worms were cultivated at 15-degree from egg to adult or at 25-degree for 12 hours after 15-degree grown until young adult, then tota...
ORGANISM(S): Caenorhabditis elegans 
2016-05-31 | E-GEOD-81409 | biostudies-arrayexpress
TranscriptomicsEffect of VirR/VirS-VR-RNA regulatory cascade on the expression of chromosomal genes of Clostridium perfringens
The microarrays were subjected to two-color hybridization using Cy5 and Cy3 dyes incorporated in the cDNAs synthesized from total RNA samples of strains. We compared each gene’s transcription level between the wild-type (WT) strain 13 (labeled by Cy5) and the VirR-mutant strain (TS133) or VR-RNA-...
ORGANISM(S): Clostridium perfringens str. 13 
2010-05-05 | E-GEOD-12833 | biostudies-arrayexpress
TranscriptomicsTranscriptomic analysis for response of EHEC to short chain fatty acids
Enterohaemorrhagic Escherichia coli (EHEC) is an emerging pathogen that causes diarrhea and heamolytic uremic syndrome. Expression of genes associated to pathogenicity is strictly regulated by environmental factors. Since short chian fatty acids (SCFAs) are present in intestinal tract which is a tar...
ORGANISM(S): Escherichia coli 
2010-05-17 | E-GEOD-12903 | biostudies-arrayexpress
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