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TranscriptomicsDevelopmental gene expression of Xenopus laevis J strain [stage]
Comprehensive RNA-seq experiments to measure the expression of homoeologs across different developmental stages, as a part of the Xenopus laevis genome project. This work is funded by Agency Japanese Ministry of Education, Culture, Sports, Science and Technology (MEXT; "Genome Science" Gra...
ORGANISM(S): Xenopus laevis 
2016-10-24 | E-GEOD-73430 | biostudies-arrayexpress
TranscriptomicsTissue gene expression of Xenopus laevis J strain [tissue]
Comprehensive RNA-seq experiments to measure the expression of homoeologs across different tissues, as a part of the Xenopus laevis genome project. This work is funded by Agency Japanese Ministry of Education, Culture, Sports, Science and Technology (MEXT; "Genome Science" Grant ID 221S000...
ORGANISM(S): Xenopus laevis 
2016-10-24 | E-GEOD-73419 | biostudies-arrayexpress
TranscriptomicsExpression data from juvenile Xenopus laevis inner ear tissue
We implemented a functional genomics approach as a means to undertake a large-scale analysis of the Xenopus laevis inner ear transcriptome through microarray analysis. Microarray analysis uncovered genes within the X. laevis inner ear transcriptome associated with inner ear function and impairment i...
ORGANISM(S): Xenopus laevis 
2012-05-04 | E-GEOD-37767 | biostudies-arrayexpress
MetabolomicsMetabolic profiling of identified single cells in Xenopus laevis embryos
Not available
ORGANISM(S): Xenopus laevis 
ST001028 | MetabolomicsWorkbench
TranscriptomicsInner ear expression data from pooled inner ear tissue from stages 56,57,58 Xenopus laevis larval inner ears
The inner ear continues to grow and develop until the auditory and vestibular systems reach full maturity and all of the genes involved in this process have yet to be identified. Previous gene based analysis have primarily focused on the early developmental stages following induction and initial for...
ORGANISM(S): Xenopus laevis 
2016-02-29 | E-GEOD-73829 | biostudies-arrayexpress
MetabolomicsMass spectrometry dataset of LC-MS Lipidomics Analysis of Xenopus Laevis Optic Nerve
Not available
ORGANISM(S): Xenopus laevis 
ST002414 | MetabolomicsWorkbench
TranscriptomicsTranscription profiling of brains, hindlimbs and tails of Xenopus laevis tadpoles after treatment with thyroid hormone
Premetamorphic Xenopus laevis tadpole tail respond to thyroid hormone by resorption. The goal of this experiment is to identify the genes involved in the TH-induced resorption tadpole tail and compare it to TH-induced proliferation and differentiation program in tadpole limb and brain. Xenopus tadpo...
ORGANISM(S): Xenopus laevis 
2006-11-08 | E-MNIA-94 | biostudies-arrayexpress
TranscriptomicsComparison of animal-blastomeres' RNA content to vegetal-most half of vegetal blastomeres' RNA content at the 8-cell stage of Xenopus laevis embryos to identify animal-enriched transcripts
In Xenopus laevis, a number of studies identified vegetal factors that specify the germ line, endoderm and dorsal axis, but there are few studies demonstrating roles for animal-enriched maternal mRNAs. Therefore, we carried out a microarray analysis to identify novel maternal transcripts enriched in...
ORGANISM(S): Xenopus laevis 
2013-12-21 | E-GEOD-48659 | biostudies-arrayexpress
TranscriptomicsIdentification of genes associated with lens regeneration from the cornea in Xenopus laevis tadpoles
Surgical removal of the lens from larval Xenopus laevis results in a rapid transdifferention of central corneal cells to form a new lens. The trigger for this process is understood to be an induction event arising from the unprecedented contact between the cornea and the vitreous humour that occurs ...
ORGANISM(S): Xenopus laevis 
2011-09-13 | E-GEOD-28014 | biostudies-arrayexpress
TranscriptomicsRNA-Seq of Xenopus laevis Retina after Crispr-mediated Rhodopsin depletion
In Xenopus laevis knocking out rhodopsin genes by crispr/Cas9 is a model of Retinitis pigmentosa. In late tadpole (permissive stages), glial Muller cells proliferate to support a regeneration response in the retina. However in early tadpole (refractory stages) the proliferative response is absent an...
ORGANISM(S): Xenopus laevis 
2025-02-02 | E-MTAB-13881 | biostudies-arrayexpress
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