Lai K K - OmicsDI

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Unknown (3515)
Transcriptomics (128)
Genomics (55)
Proteomics (52)
Metabolomics (16)
Models (5)
Other (1)

Organisms

Homo sapiens (103)
Drosophila melanogaster (51)
Mus musculus (34)
Caenorhabditis elegans (22)
Rattus norvegicus (3)
Helicobacter pylori 26695 (2)
Saccharomyces cerevisiae (2)
Zea mays (2)
Arabidopsis thaliana (2)
Agrobacterium fabrum str. C58 (2)
Arachis hypogaea (1)
Oryzias latipes (1)
Cirsium arvense (1)
Staphylococcus epidermidis (1)
Klebsiella pneumoniae (1)
Gallus gallus (1)
Lacticaseibacillus paracasei (1)
Mus (1)
Aedes aegypti (1)
Escherichia coli (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Human papillomavirus 16 (1)
Streptococcus pneumoniae D39 (1)

Organisms

Agrobacterium fabrum str. C58 (2)

Repository

biostudies-arrayexpress (153)
pride (38)
EGA (26)
MetaboLights (16)
iProX (8)
BioModels (5)
jPOST (3)
MassIVE (3)
geo (2)
ENA (2)
GPMDB (1)

Tissue

Cell culture (7)
Epithelial cell (5)
Heart (4)
Liver (3)
Permanent cell line cell (3)
Colon (2)
Hepatocyte (2)
Aag-2 cell (1)
Anal canal (1)
Aorta thoracica (1)
Blood cell (1)
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Brain (1)
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Cell suspension culture (1)
Early embryonic cell (1)
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Hippocampus (1)
Lung (1)
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Neuron (1)
Neutrophil (1)
Skeletal muscle cell (1)
Subcutaneous adipose tissue (1)
Synovial cell (1)

Disease

Colon cancer (3)
Acute myeloid leukemia (2)
Not Available (1)
Anal canal cancer (1)
Breast cancer (1)
Cardiovascular system disease (1)
Dengue disease (1)
Hepatocellular carcinoma (1)
Neuroblastoma (1)
Obesity (1)
Synovial sarcoma (1)

Technology Type

Mass Spectrometry (38)
Shotgun proteomics (23)
Mass spectrometry (13)
Bottom-up proteomics (8)
Data-dependent acquisition (4)
Illumina HiSeq 2000 (3)
NMR spectroscopy (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Gel-based experiment (2)
Proteogenomics (2)
ABI_SOLID, Illumina Genome Analyzer IIx, Affymetrix_GenomeWide_SNP6.34 (1)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Mass spectrometry assay (1)
All-ion fragmentation (1)
Immunopeptidomics (1)
Mass spectrometry imaging (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (7)
Liquid Chromatography MS - positive - reverse phase (7)
Gas Chromatography MS - (2)
Zymo Research (1)
PAXgene tubes (1)
Qiagen (1)
Illumina HiScanSQ (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
Instrument (1)
LTQ Orbitrap Elite (1)
Q Exactive (1)
Q Exactive Plus (1)
Bruker (1)
Flame ionisation detector MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid chromatography MS/MS - Negative (1)
Liquid chromatography MS/MS -Positive (1)
Liquid chromatography MS/MS positive (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2010 (40)
2011 (35)
2012 (22)
2015 (18)
2013 (14)
2023 (11)
2014 (10)
2026 (9)
2022 (9)
2021 (8)
2024 (7)
2025 (7)
2018 (7)
2008 (6)
2020 (6)
2016 (5)
2009 (5)
2005 (3)
2019 (3)
2017 (2)

ENSEMBL ID

ENSG00000151468 (1)

CHEBI ID

CHEBI:16919 (5)
CHEBI:18237 (4)
CHEBI:25094 (4)
CHEBI:27897 (4)
CHEBI:15354 (3)
CHEBI:15428 (3)
CHEBI:15741 (3)
CHEBI:15891 (3)
CHEBI:16704 (3)
CHEBI:16737 (3)
CHEBI:16865 (3)
CHEBI:17154 (3)
CHEBI:17268 (3)
CHEBI:17562 (3)
CHEBI:17568 (3)
CHEBI:17596 (3)
CHEBI:17750 (3)
CHEBI:18012 (3)
CHEBI:18132 (3)
CHEBI:22660 (3)
CHEBI:27389 (3)
CHEBI:30769 (3)
CHEBI:15379 (1)
CHEBI:15422 (1)
CHEBI:16761 (1)
CHEBI:17287 (1)
CHEBI:18367 (1)
CHEBI:33699 (1)
CHEBI:7044 (1)
CHEBI:7861 (1)

Metabolite Name

Creatine (2)
Cytidine (2)
Glutathione (2)
Guanine (2)
Inosine (2)
Lysine (2)
Myo-Inositol (2)
Pentadecanoic acid (2)
Robinin (2)
Sn-Glycero-3-phosphocholine (2)
Threonine (2)
Tryptophan (2)
Uridine (2)
(+ (1)
(+)-Catechin (1)
(+)-Gallocatechin (1)
(+)-Pinoresinol (1)
(+)-Prosopinine (1)
(-)-Acanthocarpan (1)
(-)-Epicatechin (1)
(-)-Glyceollin I (1)
(-)-Menthyl O-beta-D-glucoside (1)
(1-Ribosylimidazole)-4-acetate (1)
(10S)-Juvenile hormone III acid diol (1)
(10S)-Juvenile hormone III diol (1)
(15S)-15-Hydroxy-5,8,11-cis-13-trans-eicosatetraenoate (1)
(2'S)-Deoxymyxol 2'-(2,4-di-O-methyl-alpha-L-fucoside) (1)
(2'S)-Deoxymyxol 2'-alpha-L-fucoside (1)
(2S,3S)-2-Hydroxytridecane-1,2,3-tricarboxylate (1)
(3R,2'S)-Myxol 2'-(2,4-di-O-methyl-alpha-L-fucoside) (1)

First Public Date

2020 (2)

Modelling Approach

Ordinary differential equation model (5)

Lab affiliation

1. Nephrology Department of Guilin No. 924 Hospital, Guangxi Key laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research, 541002, Guilin, Guangxi, People’s Republic of China. 2. Clinical Medical Research Center, the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital), 518020, Shenzhen, Guangdong, People’s Republic of China. (1)
1Academy of Orthopedics, Guangdong Province, Guangdong Provincial Key Laboratory of Bone and Joint Degeneration Diseases, The Third Affiliated Hospital of Southern Medical University, Guangzhou, China 2The Third School of Clinical Medicine, Southern Medical University, Guangzhou, China (1)
Air Force Medical University (1)
Analytical Biochemistry and Proteomics Unit (1)
Artificial Intelligence, Innovation Frontier Institute of Research for Science and Technology, and the Department of Electrical Engineering, College of Electrical Engineering and Computer Science, National Taiwan University of Technology, Taiwan (1)
Biochemistry (1)
Chang Gung Memorial Hospital (1)
Children's Hospital of Philadelphia (1)
College of Agronomy, Gansu AgriculturalUniversity, Lanzhou 730070, China (1)
Department of Laboratory Medicine and Pathology Mayo Clinic, Rochester, Minnesota 55905 United States (1)
Department of Molecular Biosciences, University of South Florida, Tampa, FL, USA Center for Antimicrobial Resistance, University of South Florida, Tampa, FL, USA (1)
Director, Duke Molecular Physiology Institute and Sarah W. Stedman Nutrition and Metabolism Center Professor Departments of Medicine (Division of Endocrinology, Metabolism, and Nutrition) and Pharmacology & Cancer Biology Duke University Medical Center (1)
Division of Neurobiology The Roslin Institute Royal (Dick) School of Veterinary Studies College of Medicine and Veterinary Medicine University of Edinburgh Easter Bush Midlothian EH25 9RG SCOTLAND, UK (1)
Fudan University (1)
Harvard T. H. Chan School of Public Health (1)
Hayley Sharpe, Signalling, Babraham Institute, Cambridge, UK (1)
Head of Department (Pathology), University of Liege, Liege, Belgium (1)
Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei, Taiwan Chemical Biology and Molecular Biophysics Program, Taiwan International Graduate Program, Academia Sinica, Taipei, Taiwan Genome and Systems Biology Degree Program, National Taiwan University and Academia Sinica, Taipei, Taiwan. (1)
Institute of Biomedical Science, Academia Sinica, Taiwan (1)
Institute of Molecular Medicine and Cell Research, University of Freiburg, Germany (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou 510632, China (1)
MIVEGEC, Univ. Montpellier, IRD, CNRS, Montpellier, France (1)
MOE Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, Jinan University, Guangzhou, China (1)
Master program for clinical pharmacogehomics and pharmacoprotemics Chia-Li Han LAB.Taipei (1)
Max Planck Institute for Moleclar Biomedicine Bioanalyticyl Mass Spectrometry Unit Röntgenstr. 20 48149 Münster Germany (1)
Nanyang Technological University, Singapore (1)
Oxford Glycobiology Institute, Department of Biochemistry, University of Oxford, UK (1)
Professor of Medicine, Division of Endocrinology, and Director of Basic Research at the Duke Molecular Physiology Institute (1)
Proteomics Core Facility, University of Gothenburg, Sweden (1)
Proteomics Program Blegdamsvej 3 2200 København N Bygning 6 Building: 06-2-36 (1)

IsPrivate

False (5)

Modification

-17.026549 (1)
10.008269 (1)
15.994915 (1)
42.010565 (1)
45.029395 (1)
57.021464 (1)
6.020129 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (53)
RNA-seq of non coding RNA (38)
ChIP-seq (25)
RNA-seq of coding RNA (19)
Methylation profiling by array (6)
Comparative genomic hybridization by array (3)
Unknown experiment type (2)
ChIP-chip by tiling array (2)
Methylation profiling by high throughput sequencing (2)
RNAi profiling by array (1)
MicroRNA profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (471)
2022 (436)
2024 (408)
2023 (386)
2021 (375)
2020 (248)
2018 (192)
2019 (173)
2017 (141)
2015 (132)
2016 (127)
2014 (101)
2013 (82)
2011 (76)
2012 (72)
2026 (71)
2010 (67)
2009 (36)
2008 (32)
2007 (13)
2006 (5)
2004 (5)
2003 (5)
2005 (4)
2001 (4)
2000 (4)
2002 (2)

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Lai - CMEL1/BS28

modENCODE_submission_2820 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...

ORGANISM(S): Drosophila melanogaster

2010-10-18 | E-GEOD-24315 | biostudies-arrayexpress

Lai - MLDmD20c5/BS16

modENCODE_submission_2002 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...

ORGANISM(S): Drosophila melanogaster

2010-10-18 | E-GEOD-24298 | biostudies-arrayexpress

Klebsiella pneumoniae: WT vs. Hfq mutant

Transcriptional profiling of K. pneumoniae comparing the wild type strain (S5) with a hfq deletion mutant (H0201). Goal was to determine the effects of Hfq absence on global K. pneumoniae gene expression. WT vs. Hfq mutant. Eight replicates for each ORF presented in the 44K array.

ORGANISM(S): Klebsiella pneumoniae

2013-01-11 | E-GEOD-29448 | biostudies-arrayexpress

Heterogeneous nuclear ribonucleoprotein K (hnRNP K) is a tissue biomarker for detection of early hepatocellular carcinoma in patients with cirrhosis.

Not available

S-EPMC3425156 | biostudies-literature

Lai-mbn2

modENCODE_submission_3741 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...

ORGANISM(S): Drosophila melanogaster

2012-04-18 | E-GEOD-37439 | biostudies-arrayexpress

Lai-CMEW2

modENCODE_submission_3743 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...

ORGANISM(S): Drosophila melanogaster

2012-04-18 | E-GEOD-37440 | biostudies-arrayexpress

Lai-S1/BS79

modENCODE_submission_3311 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...

ORGANISM(S): Drosophila melanogaster

2012-04-18 | E-GEOD-37436 | biostudies-arrayexpress

Zinc K-edge XANES spectroscopy of mineral and organic standards.

Not available

S-EPMC6613124 | biostudies-literature

Lai–MLDmD8/BS37/BS38

modENCODE_submission_3513 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...

ORGANISM(S): Drosophila melanogaster

2012-04-18 | E-GEOD-37438 | biostudies-arrayexpress

Lai-MLDmD32/BS25/BS26

modENCODE_submission_3514 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...

ORGANISM(S): Drosophila melanogaster

2010-10-18 | E-GEOD-24607 | biostudies-arrayexpress

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3772 Results

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