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TranscriptomicsControl HepG2 vs miR-24 HepG2 cells
miR-24 targets were identified in this study using mRNA microarrays. Combined with Bioinformatics, our results show that miR-24 regulates cell cycle and DNA repair. Total RNA was isolated from C or miR-24 over-expressing HepG2 cells after 48 hr of transfection and microarray analysis was performed
ORGANISM(S): Homo sapiens 
2009-08-27 | E-GEOD-17828 | biostudies-arrayexpress
GenomicsIdentification of a novel intracellular function of the secreted ribonuclease RNASE1 in inhibiting gene expression
Identification of a novel intracellular function of the secreted ribonuclease RNASE1 in inhibiting gene expression
PRJNA1218632 | ENA
TranscriptomicsConcurrent Versus Individual Binding of HuR and AUF1 to Common Labile Target mRNAs
RNA was isolated from material that had been immunoprecipitated (IP) from Hela cells using antibodies recognizing RNA-binding proteins HuR or AUF1, as well as using a control IgG1 antibody. RNA was reverse-transcribed in the presence of [alpha-33P]dCTP and the radiolabeled product used to hybridize ...
ORGANISM(S): Homo sapiens 
2010-06-09 | E-GEOD-1361 | biostudies-arrayexpress
TranscriptomicsTIAR represses c-Myc biosynthesis following ultraviolet light irradiation
RNA was isolated from material that had been subjected to immunoprecipitation (IP) from RKO cells that were either left untreated or irradiated with 20 J/m2 UVC and collected 1h later; IP assays were carried out using either an antibody recognizing RNA-binding protein TIAR, or using a control IgG1 a...
ORGANISM(S): Homo sapiens 
2010-06-09 | E-GEOD-1433 | biostudies-arrayexpress
TranscriptomicsWhole genome expression profiling of rice leaves treated with Xanthomonas oryzae pv. oryzae secreted cell wall degrading lipase/esteraseA (LipA) at early time points, 30 min. and 120 min.
Treatment of rice tissues with purified preparations of a Xanthomonas oryzae pv. oryzae (Xoo) secreted plant cell wall degrading enzyme, Lipase/Esterase (LipA), elicits cell wall damage induced innate immune responses. LipA activity is required for induction of defense responses. In order to charact...
ORGANISM(S): Oryza sativa 
2015-06-30 | E-GEOD-53940 | biostudies-arrayexpress
GenomicsMatrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B [Iso-Seq]
Matrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B [Iso-Seq]
PRJNA846341 | ENA
GenomicsMatrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B [PAR-CLIP]
Matrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B [PAR-CLIP]
PRJNA841187 | ENA
GenomicsMatrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B [polyA capture]
Matrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B [polyA capture]
PRJNA841188 | ENA
GenomicsMatrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B [Ribo-deplete]
Matrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B [Ribo-deplete]
PRJNA841185 | ENA
GenomicsStaufen1 Represses the FOXA1-Regulated Transcriptome by Destabilizing FOXA1 mRNA in Colorectal Cancer Cells
Staufen1 Represses the FOXA1-Regulated Transcriptome by Destabilizing FOXA1 mRNA in Colorectal Cancer Cells
PRJNA983405 | ENA
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