Lan X X - OmicsDI

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Unknown (4363)
Transcriptomics (205)
Proteomics (93)
Genomics (37)
Metabolomics (17)

Organisms

Homo sapiens (144)
Mus musculus (53)
Saccharomyces cerevisiae (16)
Arabidopsis thaliana (12)
Rattus norvegicus (8)
Caldicellulosiruptor saccharolyticus (3)
Thermus thermophilus HB8 (3)
Leishmania donovani (2)
Pseudomonas syringae pv. tomato str. DC3000 (2)
Streptococcus suis (2)
Streptomyces coelicolor (2)
Staphylococcus aureus (2)
Pseudomonas putida (2)
Heterocephalus glaber (2)
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Drosophila melanogaster (2)
Danio rerio (2)
Ocimum americanum (1)
Staphylococcus aureus subsp. aureus MRSA252 (1)
Caldicellulosiruptor kronotskyensis (1)
Agrobacterium tumefaciens (1)
human oral metagenome (1)
Olea europaea (1)
Roseburia inulinivorans DSM 16841 (1)
Dictyostelium purpureum (1)
Leishmania infantum (1)
Vibrio parahaemolyticus (1)
Caulobacter vibrioides (1)
Mytilus galloprovincialis (1)
Streptococcus gordonii (1)

Organisms

Homo sapiens (1)

Repository

biostudies-arrayexpress (236)
pride (57)
iProX (26)
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Disease

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Technology Type

Mass Spectrometry (57)
Shotgun proteomics (33)
Mass spectrometry (14)
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Chemical cross-linking coupled with mass spectrometry proteomics (8)
Affinity purification coupled with mass spectrometry proteomics (7)
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Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (5)
Illumina NovaSeq 6000 (4)
Orbitrap Fusion Lumos (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Illumina HiSeq 2000 (2)
LTQ Orbitrap Velos (2)
Q Exactive (2)
Liquid Chromatography MS - (2)
Liquid Chromatography MS - alternating - hilic (2)
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Computer (1)
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Liquid Chromatography MS - alternating - reverse phase (1)
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Publication Date

2013 (31)
2012 (31)
2010 (29)
2015 (27)
2014 (27)
2022 (22)
2011 (22)
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2008 (18)
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2009 (13)
2020 (11)
2026 (9)
2018 (6)
2019 (5)
2007 (5)
2017 (3)
2006 (3)
2005 (3)

CHEBI ID

CHEBI:16704 (7)
CHEBI:17203 (7)
CHEBI:17533 (7)
CHEBI:16027 (6)
CHEBI:16196 (6)
CHEBI:17053 (6)
CHEBI:17154 (6)
CHEBI:18132 (6)
CHEBI:30769 (6)
CHEBI:41865 (6)
CHEBI:15603 (5)
CHEBI:15891 (5)
CHEBI:16015 (5)
CHEBI:16020 (5)
CHEBI:16040 (5)
CHEBI:16259 (5)
CHEBI:16335 (5)
CHEBI:16450 (5)
CHEBI:16467 (5)
CHEBI:17191 (5)
CHEBI:17295 (5)
CHEBI:17361 (5)
CHEBI:17509 (5)
CHEBI:17748 (5)
CHEBI:17895 (5)
CHEBI:18019 (5)
CHEBI:18050 (5)
CHEBI:22652 (5)
CHEBI:27823 (5)
CHEBI:48131 (5)

Metabolite Name

L-Phenylalanine (6)
Adenosine (4)
Glycerophosphocholine (4)
Oleic acid (4)
Thymine (4)
Azelaic acid (3)
Betaine (3)
Biliverdin (3)
Citrate (3)
Cytosine (3)
Glycerol 3-phosphate (3)
Indole (3)
Inosine (3)
Isoxanthopterin (3)
L-Glutamate (3)
L-Lysine (3)
Leucine (3)
N-Acetyl-L-phenylalanine (3)
Niacinamide (3)
Phloretin (3)
Pyridoxal (3)
Thymidine (3)
Uracil (3)
Uric acid (3)
Valine (3)
()12,13-DiHOME (2)
(Z)-3-Oxo-2-(2-pentenyl)-1-cyclopenteneacetic acid (2)
1,2,10-Trihydroxydihydro-trans-linalyl oxide 7-O-beta-D-glucopyranoside (2)
1,3-Dicyclohexylurea (2)
1-Methyladenosine (2)

First Public Date

2013 (1)

Study type

Transcription profiling by array (139)
RNA-seq of coding RNA (32)
ChIP-seq (25)
Comparative genomic hybridization by array (9)
RNA-seq of non coding RNA (7)
Unknown experiment type (6)
Methylation profiling by high throughput sequencing (5)
Other (2)
Transcription profiling by SAGE (1)
Human - High-throughput sequencing (1)
ChIP-chip by array (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)
ATAC-seq (1)
DNA-seq (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)

Release Date

2025 (736)
2022 (630)
2023 (580)
2024 (529)
2021 (435)
2020 (322)
2019 (215)
2018 (185)
2017 (165)
2026 (133)
2016 (132)
2015 (125)
2014 (110)
2013 (73)
2012 (57)
2010 (52)
2011 (50)
2008 (25)
2009 (23)
2007 (10)
2005 (6)
2006 (3)
2004 (1)
2003 (1)
1999 (1)

Lab affiliation

China Agricultural University (2)
Department of Physiology & Biophysics, University of California, Irvine, Irvine, CA 92697, USA (2)
Department of Physiology & Biophysics, University of California, Irvine, Irvine, California, USA (2)
Guangdong Pharmaceutical University (2)
State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province 730046, PR China (2)
The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China (2)
1.Department of Colorectal Surgery, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. 2.Guangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. (1)
2011 Collaborative Innovation Center of Tianjin for Medical Epigenetics, Tianjin Key Laboratory of Medical Epigenetics, Key Laboratory of Immune Microenvironment and Disease (Ministry of Education), Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Tianjin Medical University, Tianjin 300070, China. (1)
Army Military Medical University (1)
Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， Beijing 102206 P.R. China. (1)
Beijing proteome research center, Beijing, China (1)
Biochemistry and Structural Biology Greehey Children's Cancer Research Institute University of Texas Health at San Antonio United States (1)
Cambridge Institute for Medical Research, Hills Road, Cambridge, CB2 0XY (1)
College of Life Sciences, Northwest University, Xi’an 710069, China (1)
College of Life and Health Sciences, Northeastern University, Shenyang, China. (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China, 201203 (1)
Department of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, AR 72205 Arkansas Children's Research Institute, Little Rock, AR (1)
Department of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA (1)
Department of Rehabilitation Medicine, The Second Affiliated Hospital, School of Medicine, South China University of Technology, Guangzhou 510180, China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Fujian Provincial Key Laboratory of Plant Functional Biology, Fujian Agriculture and Forestry University, Fuzhou 350002, China (1)
Guangdong Provincial Key Laboratory of Digestive Cancer Research, The Seventh Affiliated Hospital of Sun Yat-sen University, No. 628 Zhenyuan Road, Shenzhen, 518107, Guangdong, People’s Republic of China. (1)
IRIC-Université de Montréal (1)
Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences (1)
Institute of Life and Health Engineering Assistant Director, Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes Jinan University (1)
Institute of Molecular Systems Biology, ETH Zurich (1)
Lan head / Functional Proteomics Laboratory / Federal University of Sao Paulo / Sao Jose dos Campos, Sao Paulo, Brazil (1)
Max Planck Institute of Biochemistry, Dept. of Proteomics and Signal Transduction (1)
Nanjing University, Nanjing 210023, China (1)
Nestlé Research – Nestlé Institute of Food Safety & Analytical Sciences (1)

Tags

xref:PubMed:23034519 (1)

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Transcription profiling of brains, hindlimbs and tails of Xenopus laevis tadpoles after treatment with thyroid hormone

Premetamorphic Xenopus laevis tadpole tail respond to thyroid hormone by resorption. The goal of this experiment is to identify the genes involved in the TH-induced resorption tadpole tail and compare it to TH-induced proliferation and differentiation program in tadpole limb and brain. Xenopus tadpo...

ORGANISM(S): Xenopus laevis

2006-11-08 | E-MNIA-94 | biostudies-arrayexpress

Sperm but not oocyte DNA methylome is inherited by zebrafish early embyros

5-methylcytosine is a major epigenetic modification sometimes called "the fifth nucleotide". However, our knowledge of how offspring inherit the DNA methylome from parents is limited. We generated nine single-base resolution DNA methylomes including zebrafish gametes and early embryos. The...

ORGANISM(S): Danio rerio

2013-05-20 | E-GEOD-44075 | biostudies-arrayexpress

Structure of the Lassa virus nucleoprotein revealed by X-ray crystallography, small-angle X-ray scattering, and electron microscopy.

Not available

S-EPMC3207459 | biostudies-literature

Pure Organic AIE Nanoscintillator for X-ray Mediated Type I and Type II Photodynamic Therapy.

Not available

S-EPMC10502865 | biostudies-literature

Female chromosome X mosaicism is age-related and preferentially affects the inactivated X chromosome.

Not available

S-EPMC4909985 | biostudies-literature

Nanoscale Metal-Organic Layers for Deeply Penetrating X-ray-Induced Photodynamic Therapy.