Larsen R R - OmicsDI

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Unknown (1416)
Proteomics (125)
Transcriptomics (68)
Genomics (10)
Metabolomics (10)
Other (1)
Multiomics (1)

Organisms

Homo sapiens (88)
Mus musculus (43)
Bifidobacterium breve UCC2003 (13)
Rattus norvegicus (8)
Bos taurus (4)
Saccharomyces cerevisiae (4)
Sus scrofa domesticus (4)
Lotus japonicus (3)
Acyrthosiphon pisum (2)
Bifidobacterium breve (1)
Lactobacillus helveticus (1)
Saccharomyces paradoxus (1)
Selaginella moellendorffii (1)
Zea mays (1)
Streptococcus pneumoniae (1)
Ovis aries (1)
Pseudomonas aeruginosa (1)
Agkistrodon (1)
Caenorhabditis elegans (1)
Crotalus atrox (1)
Crotalus cerberus (1)
Crotalus viridis (1)
Drosophila melanogaster (1)
Equus asinus (1)
Escherichia coli (1)
Listeria monocytogenes (1)
Mycobacterium tuberculosis (1)
Plasmodium falciparum FcB1/Columbia (1)
Plasmodium falciparum NF54 (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Organisms

Bifidobacterium breve UCC2003 (1)

Repository

pride (104)
biostudies-arrayexpress (69)
MassIVE (20)
MetaboLights (9)
EGA (6)
ENA (3)
GNPS (1)
GPMDB (1)
PanoramaPublic (1)

Tissue

Cell culture (28)
Permanent cell line cell (15)
Epithelial cell (11)
Brain (9)
Blood plasma (5)
Liver (5)
Primary cell (4)
Skeletal muscle fiber (4)
Bone cell (2)
Cerebrospinal fluid (2)
Heart (2)
Islet of Langerhans (2)
Skeletal muscle (2)
Spinal ganglion (2)
Adult endothelial progenitor cell (1)
Aortic endothelial cell (1)
Astrocyte (1)
Blood (1)
Blood cancer cell (1)
Bone cancer cell line (1)
Brain cancer cell line (1)
Breast cancer cell (1)
Breast cancer cell line (1)
Cardiac muscle cell (1)
Cecum cancer cell line (1)
Cell line cell (1)
Cervical cancer cell line (1)
Colonic cancer cell (1)
Colorectal cancer cell line (1)
HeLa cell (1)

Disease

Breast cancer (6)
Type 2 diabetes mellitus (6)
Alzheimer's disease (4)
Parkinson's disease (3)
Plasmodium falciparum malaria (3)
Colon cancer (2)
Osteosarcoma (2)
Scrapie infected (1)
Not Available (1)
B-cell adult acute lymphocytic leukemia (1)
Brain cancer (1)
Brain disease (1)
Cancer (1)
Cardiovascular system disease (1)
Cervix carcinoma (1)
Diffuse midline glioma (1)
Disease free (1)
Fatty liver disease (1)
Influenza (1)
Limb ischemia (1)
Liver inflammation (1)
Malignant neoplasm of ovary (1)
Melanoma (1)
Meningitis (1)
Non-small cell lung carcinoma (1)
Pancreatic ductal adenocarcinoma (1)
Polycystic liver disease (1)
Prostate adenocarcinoma (1)
Substance abuse (1)
Trypanosomiasis (1)

Technology Type

Mass Spectrometry (104)
Shotgun proteomics (65)
Bottom-up proteomics (23)
Affinity purification coupled with mass spectrometry proteomics (18)
Data-dependent acquisition (9)
Data-independent acquisition (6)
Mass spectrometry (5)
SWATH MS (5)
NMR spectroscopy (3)
Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
All-ion fragmentation (1)
DiaPASEF (1)
MSE (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Q Exactive (6)
Illumina NovaSeq 6000 (4)
Orbitrap Fusion Lumos (4)
TripleTOF 5600 (3)
Liquid Chromatography MS - positive - reverse phase (3)
Illumina HiSeq 4000 (2)
Bruker (2)
Chromium Controller, 10x Genomics and Chromium X, 10x Genomics (1)
Chromium Controller, 10x Genomics and Chromium X, 10x Genomics (1)
Cell culture (1)
NextSeq 550 (1)
Illumina HiSeq 2000 (1)
Orbitrap Fusion (1)
Instrument (1)
LTQ Orbitrap Elite (1)
Velos Plus (1)
ISQ LT (Thermo) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Nuclear Magnetic Resonance (NMR) (1)
TripleTOF 5600 (AB Sciex) (1)
LTQ-Orbitrap (1)

Publication Date

2026 (19)
2021 (16)
2020 (16)
2023 (15)
2013 (15)
2019 (14)
2010 (13)
2018 (13)
2015 (12)
2022 (10)
2025 (9)
2017 (9)
2016 (9)
2024 (7)
2012 (7)
2014 (6)
2011 (5)
2008 (5)
2005 (2)
2007 (1)
2009 (1)

CHEBI ID

CHEBI:16449 (4)
CHEBI:16811 (4)
CHEBI:18237 (4)
CHEBI:27266 (4)
CHEBI:15366 (3)
CHEBI:16737 (3)
CHEBI:18186 (3)
CHEBI:24898 (3)
CHEBI:26271 (3)
CHEBI:26986 (3)
CHEBI:28044 (3)
CHEBI:28300 (3)
CHEBI:30769 (3)
CHEBI:78320 (3)
CHEBI:15354 (2)
CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:15843 (2)
CHEBI:15929 (2)
CHEBI:16077 (2)
CHEBI:16411 (2)
CHEBI:16551 (2)
CHEBI:16704 (2)
CHEBI:16750 (2)
CHEBI:16919 (2)
CHEBI:16997 (2)
CHEBI:17126 (2)
CHEBI:17170 (2)
CHEBI:17306 (2)
CHEBI:17750 (2)

Metabolite Name

Valine (4)
Alanine (3)
Glutamine (3)
Isoleucine (3)
Methionine (3)
3-Hydroxybutyrate (2)
Acetate (2)
Arginine (2)
Asparagine (2)
Betaine (2)
Carnitine (2)
Choline (2)
Citrate (2)
Creatine (2)
Creatinine (2)
Dimethylamine (2)
Formate (2)
Fumarate (2)
Glutamate (2)
Glycerol (2)
Glycine (2)
Lactate (2)
Lysine (2)
Mannose (2)
Methanol (2)
Phenylalanine (2)
Proline (2)
Propylene glycol (2)
Serine (2)
Succinate (2)

First Public Date

2019 (2)
2021 (1)

Modification

0.984016 (1)
1.99407 (1)
10.008269 (1)
15.994915 (1)
2x(15)N labeled L-lysine (1)
3.98814 (1)
4x(15)N labeled L-arginine (1)
57.021464 (1)
79.966331 (1)
8.014199 (1)

Study type

Transcription profiling by array (51)
RNA-seq of coding RNA (9)
Comparative genomic hybridization by array (4)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
ChIP-seq (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (168)
2023 (149)
2021 (141)
2022 (140)
2024 (125)
2020 (112)
2017 (86)
2018 (84)
2019 (77)
2015 (66)
2016 (64)
2014 (51)
2012 (42)
2013 (34)
2010 (33)
2011 (30)
2026 (24)
2008 (15)
2009 (13)
2007 (12)
2002 (6)
2004 (4)
2005 (3)
2003 (2)
2000 (2)
2006 (1)
2001 (1)

Lab affiliation

Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (6)
Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark (4)
Department of Biochemistry and Molecular Biology, Protein Research group, University of Southern Denmark, Odense, Denmark (2)
Department of Cancer and Inflammation Research, Institute of Molecular Medicine, University of Southern Denmark (2)
Department of Parasitology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil (2)
Head of Department Department of Molecular Mechanisms of Disease University of Zurich Winterthurerstr. 190 8057 Zurich, Switzerland (2)
Martin R. Larsen's Group, PR Group, Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark (2)
Molecular Neuropharmacology and Genetics Laboratory, Department of Neuroscience, Faculty of Health and Medical Sciences, University of Copenhagen, 2200, Denmark (2)
University of Southern Denmark (2)
University of Toronto (2)
Vetsuisse Faculty (VET), Department of Molecular Mechanisms of Disease, University of Zurich (UZH) (2)
1. Cancer Signalling Research Group, School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Callaghan, NSW, AUSTRALIA 2. Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, AUSTRALIA 3. Paediatric Program, Mark Hughes Foundation Centre for Brain Cancer Research, College of Health, Medicine, and Wellbeing, Callaghan, NSW, AUSTRALIA (1)
ARUK Senior Research Fellow & Departmental Research Lecturer Department of Physiology, Anatomy and Genetics, Kavli Institute for Nanoscience Discovery, University of Oxford, UK (1)
Analytical Chemistry Lab, Istituto Italiano di Tecnologia, Via Morego 30, 16163, Genova, Italy (1)
Arkana Laboratories, Little Rock, Arkansas, USA (1)
Associate Professor Tracy Putoczki The Walter and Eliza Hall Institute of Medical Research Australia (1)
Associate Professor of Neuroscience and BIO5 Institute University of Arizona (1)
Biomedical Research in Melanoma-Animal Models and Cancer Laboratory Vall d'Hebron Research Institute (VHIR), Vall d'Hebron Hospital Barcelona-UAB Barcelona, 08035, Spain. (1)
Caprion Proteomics Inc., 201 President-Kennedy Ave., Montreal H2X 3Y7, Quebec, Canada (1)
Cell Cycle Group Cancer Epigenetics and Biology Program (PEBC) Bellvitge Isntitute of Biomedical Research (IDIBELL) Hospital Duran i Reynals Avinguda de la Gran Via de l'Hospitalet, 199-203 08908 - L'Hospitalet de Llobregat (1)
Centre for Heamato-Oncology / Barts Cancer Institute (1)
Centre for Systems Biology at the SLRI (1)
Charité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Institute of Pathology, Berlin, Germany. (1)
Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD) and Institute for Mitochondrial Diseases and Aging, Medical Faculty, University of Cologne, Cologne, Germany. (1)
Department of Biochemistry and Molecular Biochemistry, University of Southern Denmark, Odense, Denmark (1)
Department of Biochemistry and Molecular Biology University of Southern Denmark Campusvej 55 DK-5230 Odense M Denmark (1)
Department of Biochemistry and Molecular Biology University of Southern Denmark, Odense, Denmark (1)
Department of Biochemistry and Molecular Biology, University of Southern Denmark (1)
Department of Biochemistry and Molecular Biology, University of Southern Denmark, Denmark (1)
Department of Biochemistry and Molecular Biology, University of Southern Denmark, Denmark. (1)

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Molecular markers in the CSF proteome differentiate neuroinflammatory diseases

Manuscript "Molecular markers in the CSF proteome differentiate neuroinflammatory diseases" by Maria L. Elkjaer Arkadiusz Nawrocki, Tim Kacprowski, Anja Hviid Simonsen, Romain Marignier, Tobias Sejbaek, Helle H. Nielsen, Lene Wermuth, Peter Høgh, Finn Sellebjerg, Richard Reynolds, Jan Baumbach, Mart...

ORGANISM(S): Homo sapiens (Human)

2021-02-22 | PXD017643 | Pride

Enrichment of Cysteine S-palmitoylated peptides using Sodium Deoxycholate Acid Precipitation - SDC-ACE

S-palmitoylation is a poorly understood post-translational modification that is gaining more attention as an essential regulator of cellular processes. The reversible nature of S-palmitoylation allows for fine-tuned control of cellular events and adaptation to stimuli. The enrichment of S-palmitoyla...

ORGANISM(S): Mus musculus (Mouse) Acyrthosiphon pisum (Pea aphid)

2026-02-16 | PXD054682 | Pride

Cysteine palmitoylation mouse brain palmitoylome dbdb mice mouse tissue specific palmitoylation

High-resolution elevation models of Larsen B glaciers extracted from 1960s imagery.

Not available

S-EPMC11231284 | biostudies-literature

Staged Bilateral Total Hip Arthroplasty in a Patient With Larsen Syndrome.

Not available

S-EPMC10238462 | biostudies-literature

GZF1 Mutations Expand the Genetic Heterogeneity of Larsen Syndrome.

Not available

S-EPMC5420357 | biostudies-literature

Molecular markers in the CSF proteome differentiate neuroinflammatory diseases

ORGANISM(S): Homo sapiens (Human)

2022-08-08 | PXD017681 | Pride

Human csf Multiple sclerosis Proteomics

FKBP14 kyphoscoliotic Ehlers-Danlos syndrome misdiagnosed as Larsen syndrome: a case report.

Not available

S-EPMC10393184 | biostudies-literature

Pharmacological inhibition of mitochondrial soluble adenylyl cyclase in astrocytes causes activation of AMP-activated protein kinase and induces breakdown of glycogen

Astrocytes contain the majority of the brain’s supply of glycogen which has been suggested to play an important role in neuronal synaptic plasticity. This may be mediated by release of glycogen-derived lactate or glutamine supporting neuronal metabolism or via induction of neuronal signaling pathway...

ORGANISM(S): Mus musculus (Mouse) Acyrthosiphon pisum (Pea aphid)

2021-08-13 | PXD027901 | Pride

Mouse astrocytes Amp-activated protein kinase Energy metabolism Adenylyl cyclase Phosphorylation

11C-(R)-PK11195 PET imaging of microglial activation and response to minocycline in zymosan-treated rats.

Not available

S-EPMC3761794 | biostudies-literature

ROMOP: a light-weight R package for interfacing with OMOP-formatted electronic health record data.

Not available

S-EPMC6800657 | biostudies-literature

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1630 Results

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