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TranscriptomicsRNA-seq for Thermotoga maritima MSB8 glucose evolved cultures
RNA-seq was performed on T. maritima wild type, three glucose evolved cultures, and three glycerol adapted cultures. Wild type and glucose evolved strains were grown on glucose minimal media and glycerol evolved cultures were grown on glycerol minimal media. All samples were harvested in exponential...
ORGANISM(S): Thermotoga maritima MSB8 
2015-06-09 | E-GEOD-63141 | biostudies-arrayexpress
TranscriptomicsThermotoga maritima wild type minimal media expression analysis
An eight chip study using total RNA recovered from separate wild-type cultures of Thermotoga maritima at mid-log with 3 different minimal sugar media. A eight-chip study using total RNA recovered from separate wild-type cultures of Thermotoga maritima at mid-log with 3 different minimal sugar media....
ORGANISM(S): Thermotoga maritima MSB8 
2012-07-02 | E-GEOD-28822 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of Thermotoga maritima under multiple growth conditions [tiling array]
Investigation of transcripts (boundary, level, etc.) across the entire T. maritima genome in mulitple growth conditions, including logphase, late exponential, heat shock and hydrogen inhibited conditions. The new genome annotation has been approved by Genbank [CP004077, pending release of the manus...
ORGANISM(S): Thermotoga maritima MSB8 
2013-08-02 | E-GEOD-37391 | biostudies-arrayexpress
TranscriptomicsRibosome profiling of E. coli K-12 MG1655 MOPS rich media with 0.2% glucose
Ribosome profiling was performed on E. coli wild type cells. All replicates were grown to an OD of ~0.4 in MOPS rich Media with 0.2% glucose supplemented, aerobically in shake flasks. Cultures were treated with chloramphenicol 2 min prior to harvest. Two biological replicates
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2015-06-09 | E-GEOD-63858 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of Thermotoga maritima
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Thermotoga maritima MSB8 
2013-08-02 | E-GEOD-37483 | biostudies-arrayexpress
TranscriptomicsTranscription start site analysis for Thermotoga maritima [RNA-seq]
Investigation of 5' transcripts using strand specific sequencing for T. maritima under logphase, maltose minimal media growth conditions Two replicate samples were sequenced after isolating total RNA of cultures grown in maltose minimal media. Cells were harvested in logphase growth.
ORGANISM(S): Thermotoga maritima MSB8 
2013-08-02 | E-GEOD-37461 | biostudies-arrayexpress
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