Lee Chan C - OmicsDI

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Unknown (2096)
Transcriptomics (64)
Genomics (61)
Proteomics (57)
Metabolomics (8)
Multiomics (1)

Organisms

Homo sapiens (124)
Alphavirus (32)
Archaea (32)
Bacteria (32)
Betaherpesvirinae (32)
Borrelia (32)
Botrytis cinerea (32)
Candida albicans (32)
Clostridium perfringens (32)
Eukaryota (32)
Fungi (32)
Hepatitis B virus (32)
Human betaherpesvirus 5 (32)
Influenza A virus (32)
Influenza C virus (32)
Japanese encephalitis virus group (32)
Mammarenavirus (32)
Miscanthus x giganteus (32)
Mycobacterium tuberculosis (32)
Orthoflavivirus (32)
Panicum virgatum (32)
Pseudomonas aeruginosa (32)
Rattus (32)
Mus musculus (12)
Arabidopsis thaliana (5)
Brassica rapa subsp. pekinensis (1)
Taeniopygia guttata (1)
Pseudomonas aeruginosa (1)
Saccharomyces cerevisiae (1)
gut metagenome (1)

Repository

biostudies-arrayexpress (71)
EGA (57)
pride (32)
jPOST (17)
MetaboLights (7)
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iProX (1)

Tissue

Cell culture (11)
Epithelial cell (5)
B cell (1)
Blood cell (1)
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Blood serum (1)
Cell line cell (1)
Fibroblast (1)
Haploid (1)
HeLa cell (1)
Hepatocyte (1)
Liver (1)
Mammary epithelial cell (1)
Mammary gland (1)
Natural killer cell (1)
Pluripotent stem cell (1)
Primary cell (1)
Stomach (1)
Venom (1)

Disease

Breast cancer (4)
Acute leukemia (1)
COVID-19 (1)
Colorectal cancer (1)
Disease free (1)
Liver cancer (1)
Lymphoma (1)
Postural orthostatic tachycardia syndrome (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (32)
Shotgun proteomics (15)
Bottom-up proteomics (11)
Mass spectrometry (7)
Data-dependent acquisition (7)
Gel-based experiment (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Liquid Chromatography MS - negative - reverse phase (4)
Illumina NovaSeq 6000 (3)
Q Exactive (2)
Q Exactive HF-X (2)
Illumina NovaSeq X (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
Q Exactive HF (1)
LTQ Orbitrap Elite (1)
Orbitrap Astral (1)
Q Exactive Plus (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
5975C Series GC/MSD (Agilent) (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2025 (26)
2014 (11)
2012 (10)
2023 (10)
2010 (9)
2026 (8)
2015 (8)
2013 (8)
2022 (8)
2011 (6)
2020 (5)
2019 (5)
2016 (5)
2009 (5)
2021 (3)
2017 (2)
2006 (2)
2018 (2)
2024 (1)

CHEBI ID

CHEBI:16113 (3)
CHEBI:28866 (2)
CHEBI:28941 (2)
CHEBI:31009 (2)
CHEBI:17992 (2)
CHEBI:30805 (2)
CHEBI:17822 (2)
CHEBI:28757 (2)
CHEBI:25017 (2)
CHEBI:15963 (2)
CHEBI:27266 (2)
CHEBI:16995 (2)
CHEBI:28822 (2)
CHEBI:28875 (2)
CHEBI:25094 (2)
CHEBI:18237 (2)
CHEBI:16196 (2)
CHEBI:17148 (2)
CHEBI:15741 (2)
CHEBI:17268 (2)
CHEBI:15428 (2)
CHEBI:18127 (2)
CHEBI:44247 (2)
CHEBI:18089 (2)
CHEBI:30769 (2)
CHEBI:88901 (1)
CHEBI:86427 (1)
CHEBI:190675 (1)
CHEBI:190674 (1)
CHEBI:190202 (1)

Metabolite Name

SM d38:1; (1)
SM d36:2; (1)
SM d36:1; (1)
SM d34:1; (1)
SM d34:0; (1)
SM d32:1; (1)
SM d30:1; (1)
PE p-38:6; or PE o-38:7; (1)
PE p-38:4; or PE o-38:5; (1)
PE 38:4; B (1)
PE 38:2; (1)
PE 36:2; (1)
PE 34:2; (1)
PE 34:1; (1)
PC p-36:4; or PC o-36:5; (1)
PC p-34:2; or PC o-34:3; (1)
PC o-32:0; (1)
PC 40:6; B (1)
PC 40:6; A (1)
PC 38:4; A (1)
PC 38:2; (1)
PC 36:4; B (1)
PC 36:4; A (1)
PC 36:2; (1)
PC 36:1; (1)
PC 34:3; (1)
PC 34:2; (1)
PC 34:1; (1)
PC 33:1; (1)
PC 32:2; (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (39)
Comparative genomic hybridization by array (6)
RNA-seq of coding RNA (5)
Unknown experiment type (4)
Methylation profiling by array (4)
ChIP-seq (2)
DNA-seq (2)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
Transcription profiling by RT-PCR (1)
Spatial transcriptomics by high-throughput sequencing (1)
Single nucleus RNA sequencing (1)
Proteomic profiling by array (1)
Genotyping by high throughput sequencing (1)

Release Date

2022 (260)
2021 (260)
2023 (243)
2025 (233)
2024 (230)
2020 (177)
2018 (125)
2019 (123)
2016 (93)
2017 (85)
2015 (69)
2014 (51)
2013 (43)
2026 (42)
2011 (31)
2010 (29)
2012 (25)
2009 (17)
2008 (10)
2007 (9)
2005 (5)
2006 (4)
2004 (2)
2003 (1)

Lab affiliation

Department of Cell Biology, Harvard Medical School, Boston MA (3)
1VIB Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium 2Department of Biomolecular Medicine, Ghent University, Ghent, 9052, Belgium (2)
AmsterdamUMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, The Netherlands (2)
1 VIB Center for Medical Biotechnology, VIB, Ghent, East Flanders, 9052, Belgium 2 Department of Biomolecular Medicine, Ghent University, Ghent, East Flanders, 9052, Belgium (1)
ABCT, The Hong Kong Polytechnic University (1)
Associate Professor (1)
Associate Professor of Neurology Institute for Cell Engineering Johns Hopkins University School of Medicine (1)
Baylor College of Medicine (1)
Biochemistry and Molecular Biology, Michael Smith Laboratories, University of British Columbia (1)
Cancer Science Institute of Singapore, National University of Singapore (1)
Cancer Science Institute of Singapore, National University of Singapore, Singapore (1)
Department of Applied Biology and Chemical Technology, Hong Kong Polytechnic University, Hung Hom, Hong Kong S.A.R., China (1)
Department of Cell Biology, Harvard Medical School, Boston, MA (1)
Department of Chemistry, Donnelly Centre for Cellular and Biomolecular Research,Institute of Biomaterials and Biomedical Engineering, University of Toronto (1)
Department of Health Technology & Informatics (HTI), The Hong Kong Polytechnic University (PolyU) (1)
Department of Systems Biology, City of Hope Comprehensive Cancer Center, Monrovia, CA, USA (1)
Early Detection and Prevention, Translational Genomics Research Institute, Phoenix, AZ  Integrated Mass Spectrometry Shared Resource, City of Hope Comprehensive Cancer Center, Duarte, CA  (lab head) (1)
Harvard T. H. Chan School of Public Health (1)
Harvard T.H. Chan School of Public Health (1)
Head, Department of Biochemistry and Molecular Biology Head, Signalling Network Laboratory Head, Biomedicine Discovery Institute Cancer Program Department of Biochemistry and Molecular Biology Monash University Level 1, Building 77, Clayton Campus 23 Innovation Walk Clayton VIC 3800 Australia (1)
Institute of Biological Chemistry (1)
MIT (1)
Monash University (1)
Proteome Exploration Laboratory, Beckman Institute, California Institute of Technology, Pasadena, CA 91125 (1)
Singapore Immunology Network (SIgN), Agency for Science, Technology and Research, Singapore 138648, Singapore (1)
St. Giles Laboratory of Human Genetics of Infectious Diseases, The Rockefeller University, New York, New York, USA. (1)
UTHealth Houston, Texas, USA (1)
Young Investigator Group: Mass Spectrometry in Systems Neurosciences, School of Life Sciences, Technical University of Munich, Freising, Germany (1)

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Assessment of antimalarial activity of crude extract of Chan-Ta-Lee-La and Pra-Sa-Chan-Dang formulations and their plant ingredients for new drug candidates of malaria treatment: In vitro and in vivo experiments.

Not available

S-EPMC10783769 | biostudies-literature

Neural Pattern of Chanting-Driven Intuitive Inquiry Meditation in Expert Chan Practitioners.

Not available

S-EPMC12466501 | biostudies-literature

Differential role of sphingomyelin in influenza virus, rhinovirus and SARS-CoV-2 infection of Calu-3 cells

Host cell lipids play a pivotal role in the pathogenesis of respiratory virus infection. However, a direct comparison of the lipidomic profile of influenza virus and rhinovirus infections is lacking. In this study, we first compared the lipid profile of influenza virus and rhinovirus infection in a ...

2022-11-15 | MTBLS2352 | MetaboLights

Are there sociodemographic-specific associations of coping with heart disease and diabetes incidence?

Not available

S-EPMC11899792 | biostudies-literature

Gene expression profiling of oral squamous cell carcinoma (OSCC)

According to epidemiological studies, a vast majority, approximately 80%~90% of male OSCC patients in Taiwan habitually drink alcohol (A), and chew betel quid (B), and use cigarette (C). To assess the impact of these dietary factors on the transcriptom, we conduct a high-throughput screen survey in ...

ORGANISM(S): Homo sapiens

2013-05-02 | E-GEOD-37991 | biostudies-arrayexpress

Whole transcription data for mouse spermatogonial cells

Spermatogenesis is a multi-step yet tightly regulated developmental process to produce male gemetes for reproduction. In mouse spermatogenesis, a sub-group of type A spermatogonia (Spga) known as spermatogonial stem cells (SSCs) maintain their population by self-renewal, and differentiate through mi...

ORGANISM(S): Mus musculus

2014-02-27 | E-GEOD-55381 | biostudies-arrayexpress

Causal influences of salience/cerebellar networks on dorsal attention network subserved age-related cognitive slowing.

Not available

S-EPMC9886783 | biostudies-literature

Inflammatory risk contributes to post-COVID endothelial dysfunction through anti-ACKR1 autoantibody.

Not available

S-EPMC11091471 | biostudies-literature

Myeloperoxidase inhibition may protect against endothelial glycocalyx shedding induced by COVID-19 plasma.

Not available

S-EPMC10160718 | biostudies-literature

The transcriptomic effect of induced LRIG1 expression in NPC cells

As LRIG1 known to be a negative regulator of EGFR, we postulate that restored LRIG1 expression will change the transcription profile through the regulation of EGFR as well as its downstream signal cascades. Thus, we conducted a time-course microarray study to examine the effect of restored LRIG1 exp...

ORGANISM(S): Homo sapiens

2013-05-02 | E-GEOD-37349 | biostudies-arrayexpress

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