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Proteomics (194)
Transcriptomics (185)
Genomics (27)
Metabolomics (26)
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Other (1)

Organisms

Homo sapiens (161)
Mus musculus (84)
Arabidopsis thaliana (15)
Oryza sativa (4)
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Sinorhizobium fredii NGR234 (1)
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Streptomyces avermitilis (1)
Streptococcus sanguinis (1)
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uncultured bacterium (1)
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Bacillus subtilis subsp. subtilis (1)
Macaca mulatta (1)
Pan troglodytes (1)
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Escherichia coli BW25113 (1)
synthetic construct (1)
Oryza sativa Indica Group (1)
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Nicotiana tabacum (1)
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Oncorhynchus mykiss (1)

Organisms

gut metagenome (1)

Repository

biostudies-arrayexpress (205)
iProX (111)
pride (74)
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Tissue

Cell culture (23)
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Disease

Disease free (5)
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Not Available (1)
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Pain (1)
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Prostate cancer (1)
Rheumatoid arthritis (1)
Syndrome (1)
Wounds and Injuries (1)
Zika fever (1)

Technology Type

Mass Spectrometry (74)
Shotgun proteomics (39)
Mass spectrometry (23)
Bottom-up proteomics (10)
Gel-based experiment (7)
Affinity purification coupled with mass spectrometry proteomics (4)
Top-down proteomics (4)
Mass spectrometry assay (3)
Data-independent acquisition (3)
Proteogenomics (3)
Data-dependent acquisition (2)
SWATH MS (2)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M (1)
Affinity proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Immunopeptidomics (1)
Mass spectrometry imaging (1)
RNA mass spectrometry (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
Liquid Chromatography MS - negative - reverse phase (7)
Illumina HiSeq 2500 (4)
Illumina NovaSeq 6000 (2)
NextSeq 500 (2)
LTQ Orbitrap Elite (2)
TOF Pegasus HT (LECO) (2)
6540 Q-TOF LC/MS (Agilent) (2)
TripleTOF 5600 (AB Sciex) (2)
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Illumina HiSeq 2000 (1)
Instrument (1)
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Velos Plus (1)
GC色Agilent 7890A, Agilent ,LECOChroma TOF PEGASUS HT, LECO (1)
Xevo G2-XS QTOF (Waters) (1)
Xevo TQ MS (Waters) (1)
Liquid Chromatography MS - alternating – hilic (1)
Gas Chromatography MS - positive - medium polarity - Flame ionisation detector MS - positive (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Gas Chromatography MS - positive (1)
Agilent 6890 GC/5973N MSD (1)
Xevo G2 QTOF (Waters) (1)
Liquid Chromatography MS - (1)

Publication Date

2015 (41)
2013 (36)
2014 (32)
2022 (30)
2016 (30)
2021 (29)
2025 (27)
2023 (21)
2012 (17)
2011 (16)
2020 (15)
2010 (15)
2024 (13)
2008 (11)
2019 (10)
2026 (10)
2017 (10)
2018 (9)
2007 (4)
2009 (3)
2005 (2)
2006 (1)

CHEBI ID

CHEBI:30769 (8)
CHEBI:16811 (7)
CHEBI:28044 (7)
CHEBI:7916 (7)
CHEBI:28865 (7)
CHEBI:26271 (6)
CHEBI:17126 (6)
CHEBI:28300 (6)
CHEBI:15741 (6)
CHEBI:17154 (6)
CHEBI:16196 (6)
CHEBI:73024 (6)
CHEBI:28834 (6)
CHEBI:16737 (6)
CHEBI:27897 (6)
CHEBI:17596 (6)
CHEBI:15756 (6)
CHEBI:17351 (6)
CHEBI:17992 (5)
CHEBI:36090 (5)
CHEBI:16450 (5)
CHEBI:17822 (5)
CHEBI:16856 (5)
CHEBI:18237 (5)
CHEBI:18186 (5)
CHEBI:18257 (5)
CHEBI:16525 (5)
CHEBI:64489 (5)
CHEBI:16750 (5)
CHEBI:28842 (5)

Metabolite Name

Creatinine (5)
Inosine (5)
Betaine (4)
Glutathione (4)
Pantothenic acid (4)
Nicotinamide (4)
Taurine (4)
Adenosine (4)
Spermidine (4)
Guanine (4)
Cytosine (4)
Glutamine (4)
Guanosine (4)
Hypoxanthine (4)
Ethanolamine (3)
Ribitol (3)
4-Hydroxycinnamic acid (3)
Threonic acid (3)
Glycine (3)
Uracil (3)
Valine (3)
Deoxyuridine (3)
Butyric acid (3)
Benzyl alcohol (3)
Ornithine (3)
2-Methylbutyroylcarnitine (3)
Succinic acid (3)
Acetylcarnitine (3)
Decanoylcarnitine (3)
Indole (3)

IsPrivate

False (1)

First Public Date

2019 (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (126)
RNA-seq of coding RNA (26)
Methylation profiling by high throughput sequencing (10)
RNA-seq of non coding RNA (9)
ChIP-seq (8)
Comparative genomic hybridization by array (6)
Methylation profiling by array (5)
Other (4)
Transcription profiling by tiling array (2)
DNA-seq (2)
Transcription profiling by SAGE (1)
ChIP-chip by tiling array (1)
High-throughput sequencing (1)
Human - One-color microarray (1)
ChIP-chip by array (1)
Genotyping by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (707)
2022 (584)
2024 (564)
2023 (521)
2021 (410)
2020 (284)
2019 (215)
2018 (172)
2017 (162)
2016 (156)
2015 (130)
2014 (96)
2026 (93)
2013 (69)
2012 (47)
2010 (28)
2011 (27)
2008 (14)
2009 (10)
2007 (10)
2005 (5)
2001 (1)

Lab affiliation

Yazhouwan National Laboratory, Sanya 572024, China (3)
Center for Functional Protein Assemblies (CPA), Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich (TUM), Ernst-Otto-Fischer-Stra?e 8, 85748 Garching, Germany (2)
Fudan University (2)
westlake.edu.cn (2)
1,College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi 712100, China 2,Key Laboratory of Animal Biotechnology, Ministry of Agriculture, Northwest A&F University, Yangling, Shaanxi 712100, China (1)
1Department of Chemistry, Georgia State University, Atlanta, GA (1)
1Department of Physiology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA (1)
Beijing Chaoyang Hospital, Capital Medical University (1)
Bio-X Institutes, Key Laboratory for the Genetics of Development and Neuropsychiatric Disorders (Ministry of Education), Shanghai Key Laboratory of Psychotic Disorders, and Brain Science and Technology Research Center, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China. (1)
Boston University (1)
Center for Kidney Disease, 2nd Affiliated Hospital, Nanjing Medical University, Nanjing, Jiangsu 210003, China (1)
Center for Single-Cell Omics, School of Public Health, Shanghai Jiao Tong University School of Medicine (1)
Clinical Reaseach center for Reproduction and Genetics in Hunan Province, Reproductive and Genetic Hospital of CITIC-XIANGYA, Changsha, Hunan, China (1)
College of Life Sciences, Wuhan University (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China, 201203 (1)
Department of Biotherapy, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, and West China School of Basic Medical Sciences & Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu 610041, P.R. China (1)
Department of Comparative Medicine, Laboratory Animal Center, Dalian Medical University, Dalian, Liaoning 116000, P.R. China (1)
Department of Ecogenomics and Systems Biology; University of Vienna, Vienna, Austria. (1)
Department of General Surgery & Guangdong Provincial Key Laboratory of Precision Medicine for Gastrointestinal Tumor, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong, China; Cancer Center of Beijing Tsinghua Changgung Hospital, School of Clinical Medicine, Tsinghua Medicine, Tsinghua University, Beijing, China (1)
Department of Immunology and Microbiology, Shanghai Jiao Tong University School of Medicine (1)
Department of Microbiology & Immunology School of Medicine University of Louisville CTRB, Room 309 Louisville, KY, USA 40202 (1)
Department of Neurosurgery, Nanfang hospital, Southern Medical University, Guangzhou 510515,China (1)
Department of Obstetrics and Gynecology, University of Wisconsin-Madison, WI,USA. (1)
Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China (1)
Department of Pathophysiology, School of Basic Medicine, Key Laboratory of Ministry of Education of China for Neurological Disorders, Tongji Medical College, Huazhong University of Science and Technology (1)
Department of Pharmacology & Toxicology 1 King’s College Circle Toronto, ON, Canada, M5S 1A8 (1)
Dezhou Vegetable Engineering Research Center,Shandong,China (1)
Faculty of Health Sciences, University of Macau, Taipa, Macau, China (1)
Frontiers Science Center for Cell Responses, Department of Plant Biology and Ecology, College of Life Sciences, Nankai University, 300071 Tianjin, China (1)
Guangxi Academy of Fishery Sciences (1)

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Inhibition of neurotensin receptor 1 induces intrinsic apoptosis via let-7a-3p/Bcl-w axis in glioblastoma.

Not available

S-EPMC5518855 | biostudies-literature

Environmental drivers and transcriptomic variations shaping Lei bamboo shoots across cultivation regions.

Not available

S-EPMC11997477 | biostudies-literature

The ratio of dihomo-γ-linolenic acid to deoxycholic acid species is a potential biomarker for the metabolic abnormalities in obesity.

Not available

S-EPMC6191069 | biostudies-literature

Expression analysis of Streptomyces avermitilis NRRL8165 delta-aveI mutant

Investigation of whole genome gene expression level changes in Streptomyces avermitilis delta-aveI mutant, compared to the wild-type strain. The mutants analyzed in this study are further described in Chen L, Lu Y., Chen J, Zhang W, Shu D, Qin Z, Yang S, Jiang W. (2008) Characterization of a negativ...

ORGANISM(S): Streptomyces avermitilis

2010-05-16 | E-GEOD-16892 | biostudies-arrayexpress

Conformational stability and dynamics of the cancer-associated isoform Δ133p53β are modulated by p53 peptides and p53-specific DNA.

Not available

S-EPMC6404584 | biostudies-literature

Fault reactivation and earthquakes with magnitudes of up to Mw4.7 induced by shale-gas hydraulic fracturing in Sichuan Basin, China.

Not available

S-EPMC5554178 | biostudies-literature

Human lung cancer cells-MS for SNHG3 c.1746A>I editing

Adenosine-to-inosine (A-to-I) RNA editing is a critical post-transcriptional modification that enhances tumor genome diversity and contributes to cancer progression. In non-small cell lung cancer (NSCLC), while specific A-to-I editing events have been identified, their functional mechanisms and clin...

ORGANISM(S): Homo sapiens (Human)

2025-09-15 | PXD067139 | Pride

Evaluation of the quality of care of a multi-disciplinary risk factor assessment and management programme (RAMP) for diabetic patients.

Not available

S-EPMC3573901 | biostudies-literature

The research of RBM39 in multiple myeloma

RBM39 is a RNA binding protein, we aim to investigate its role in multiple myeloma. We performed mass spectrometry of RBM39 interacted protein obtained by IP.

ORGANISM(S): Homo Sapiens

2025-02-09 | PXD060610 |

Two-Dimensional Membranes with Highly Charged Nanochannels for Osmotic Energy Conversion.

Not available

S-EPMC9804272 | biostudies-literature

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4535 Results

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