Lewis Z Z - OmicsDI

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Unknown (2368)
Proteomics (124)
Metabolomics (66)
Genomics (43)
Transcriptomics (33)
Other (1)

Organisms

Homo sapiens (73)
Mus musculus (35)
Caenorhabditis elegans (23)
Burkholderia cenocepacia (12)
Burkholderia cenocepacia K56-2Valvano (10)
Rattus norvegicus (9)
Saccharomyces cerevisiae (6)
Bos taurus (5)
Drosophila melanogaster (5)
Escherichia coli (3)
Gallus gallus (3)
prokaryotic environmental samples (3)
Lathyrus oleraceus (2)
Rattus rattus (2)
Solanum tuberosum (2)
Xenopus laevis (2)
Macaca mulatta (1)
Pan troglodytes (1)
Neurospora crassa (1)
Daphnia magna (1)
31646 (1)
Acinetobacter baumannii AB5075 (1)
Arabidopsis thaliana (1)
Bacillus subtilis subsp. subtilis str. 168 (1)
Burkholderia ubonensis MSMB22 (1)
Chlamydomonas reinhardtii (1)
Cytomegalovirus (1)
Enterococcus faecalis (1)
Halobacterium salinarum (1)
Heterocephalus glaber (1)

Organisms

Apis mellifera (1)
Mus musculus (1)

Repository

pride (117)
MetaboLights (64)
biostudies-arrayexpress (54)
EGA (19)
MassIVE (5)
MetabolomicsWorkbench (2)
ENA (2)
geo (1)
GPMDB (1)
iProX (1)
PAXDB (1)

Tissue

Cell culture (23)
Epithelial cell (12)
Brain (11)
Early embryonic cell (4)
Embryo (4)
Lung (4)
Blood (3)
Blood plasma (3)
Cell suspension culture (3)
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Egg (3)
Muscle (3)
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Blood cell (2)
Cell line cell (2)
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Heart (2)
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Feces (1)
Urine (1)
Alveolar bone (1)
Blood serum (1)
Breast (1)
Burkitt lymphoma cell line (1)
Cardiac muscle (1)
Cecum (1)
Cecum mucosa (1)
Dendritic cell (1)
HEK-293 cell (1)

Disease

Breast cancer (5)
Disease free (4)
Colon cancer (3)
Influenza (3)
Not Available (1)
Interstitial cystitis (1)
Irritable bowel syndrome (1)
Adult respiratory distress syndrome (1)
Amyotrophic lateral sclerosis type 1 (1)
Bacterial sepsis (1)
Brain cancer (1)
Burkitt lymphoma (1)
COVID-19 (1)
Cardiovascular system disease (1)
Glaucoma (1)
Head and neck squamous cell carcinoma (1)
Kidney cancer (1)
Lung cancer (1)
Mitochondrial metabolism disease (1)
Nemaline myopathy (1)
Obesity (1)
Oculocutaneous albinism type VII (1)
Periodontitis (1)
Rheumatoid arthritis (1)
Septic shock (1)
Stomach cancer (1)
Synovial sarcoma (1)
Type 2 diabetes mellitus (1)
Viral infectious disease (1)

Technology Type

Mass Spectrometry (119)
Shotgun proteomics (65)
Mass spectrometry (46)
Bottom-up proteomics (29)
Data-dependent acquisition (15)
NMR spectroscopy (14)
Affinity purification coupled with mass spectrometry proteomics (12)
SWATH MS (10)
Illumina 15K (8)
Mass spectrometry assay (8)
Gel-based experiment (4)
Data-independent acquisition (3)
ESI (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
HDMSE (2)
SRM/MRM (2)
Top-down proteomics (2)
Affymetrix 6.0 (1)
NMR spectroscopy assay (1)
All-ion fragmentation (1)
Glycoproteomics (1)
Sodium dodecyl sulfate polyacrylamide gel electrophoresis (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (17)
Liquid Chromatography MS - positive - reverse phase (13)
Liquid Chromatography MS - positive - hilic (9)
Nuclear Magnetic Resonance (NMR) - (8)
Bruker (6)
Gas Chromatography MS - positive (6)
Liquid Chromatography MS - negative - hilic (6)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (5)
Direct infusion MS - negative (3)
Liquid Chromatography MS - positive (3)
Orbitrap Eclipse (2)
Direct infusion MS - positive (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - alternating - hilic (2)
Liquid Chromatography MS - negative (2)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
Instrument (1)
LTQ Orbitrap (1)
LTQ Orbitrap Velos (1)
Orbitrap Fusion Lumos (1)
API 5000 (AB Sciex) (1)
Agilent 6890 GC/5973N MSD (1)
Capillary electrophoresis MS - negative (1)
Capillary electrophoresis MS - positive (1)
Direct infusion MS - (1)
Exactive (Thermo Scientific) (1)
Exactive Plus (Thermo Scientific) (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)

Publication Date

2025 (31)
2024 (29)
2022 (28)
2011 (25)
2021 (22)
2023 (20)
2026 (13)
2020 (13)
2018 (11)
2014 (7)
2019 (7)
2016 (6)
2015 (6)
2010 (6)
2008 (6)
2013 (4)
2017 (4)
2012 (3)
2009 (1)

UNIPROT ID/AC

6PGD_ECOLI (1)
6PGL_ECOLI (1)
A2MG_ECOLI (1)
AAEB_ECOLI (1)
AAT_ECOLI (1)
ACCA_ECOLI (1)
ACCC_ECOLI (1)
ACCD_ECOLI (1)
ACEA_ECOLI (1)
ACKA_ECOLI (1)
ACNA_ECOLI (1)
ACNB_ECOLI (1)
ACP_ECOLI (1)
ACRA_ECOLI (1)
ACRE_ECOLI (1)
ACSA_ECOLI (1)
ACUI_ECOLI (1)
ADHE_ECOLI (1)
AEGA_ECOLI (1)
AGP_ECOLI (1)
AHPC_ECOLI (1)
AHPF_ECOLI (1)
AHR_ECOLI (1)
AK1H_ECOLI (1)
AK2H_ECOLI (1)
AK3_ECOLI (1)
ALDA_ECOLI (1)
ALF1_ECOLI (1)
ALF_ECOLI (1)
ALKH_ECOLI (1)

CHEBI ID

CHEBI:25017 (23)
CHEBI:16449 (20)
CHEBI:28044 (20)
CHEBI:25094 (18)
CHEBI:27266 (18)
CHEBI:18186 (17)
CHEBI:17368 (16)
CHEBI:27897 (16)
CHEBI:30769 (16)
CHEBI:15428 (15)
CHEBI:16704 (15)
CHEBI:24898 (15)
CHEBI:28300 (15)
CHEBI:18237 (14)
CHEBI:16737 (13)
CHEBI:26271 (13)
CHEBI:7916 (13)
CHEBI:15741 (12)
CHEBI:16919 (12)
CHEBI:17568 (12)
CHEBI:32816 (12)
CHEBI:78320 (12)
CHEBI:15354 (11)
CHEBI:16708 (11)
CHEBI:17154 (11)
CHEBI:17234 (11)
CHEBI:17351 (11)
CHEBI:17750 (11)
CHEBI:17822 (11)
CHEBI:18257 (11)

Metabolite Name

Hypoxanthine (10)
Leucine (10)
Creatine (9)
Creatinine (9)
Phenylalanine (9)
Alanine (8)
Glutamine (8)
Glycine (8)
Leucine (8)
Linoleic acid (8)
Valine (8)
Alanine (7)
Glucose (7)
Isoleucine (7)
Tyrosine (7)
Uracil (7)
Uric acid (7)
Uridine (7)
Valine (7)
Adenine (6)
Arachidonic acid (6)
Choline (6)
Citric acid (6)
Glutamate (6)
Isoleucine (6)
Lysine (6)
Lysine (6)
Pantothenic acid (6)
Proline (6)
Taurine (6)

First Public Date

2023 (1)
2014 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

ChIP-seq (22)
Transcription profiling by array (21)
Unknown experiment type (4)
Methylation profiling by array (2)
RNA-seq of coding RNA from single cells (2)
Other (1)
RNA-seq of coding RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2023 (274)
2022 (271)
2021 (264)
2025 (257)
2024 (247)
2020 (179)
2018 (158)
2019 (153)
2017 (94)
2015 (86)
2016 (85)
2014 (71)
2011 (65)
2013 (43)
2012 (42)
2026 (37)
2010 (28)
2009 (26)
2008 (16)
2007 (10)
2006 (7)
2003 (3)
2005 (2)
2000 (2)
2004 (1)
2002 (1)

Lab affiliation

Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne 3000, Australia (13)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for infection and immunity, Melbourne, 3000, Australia (10)
Cornell University Department of Microbiology (3)
Department of Molecular Biology & the Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA (2)
Molecular Biology and the Lewis-Sigler Institute for Integrative Genomics, Princeton University, USA (2)
School of Biochemistry, Biomedical Sciences Building, University Walk, University of Bristol, BS8 1TD, U.K. (2)
University of Bristol (2)
Wuhr Lab, Molecular Biology and the Lewis-Sigler Institute for Integrative Genomics, Princeton University, USA (2)
1Department of Microbiology, University of Washington, Seattle, Washington, USA (1)
Aging and Cardiovascular Discovery Center, Lewis Katz School of Medicine, Temple University, Philadelphia, PA 19140, USA (1)
Analytical Biochemistry and Proteomics Unit (1)
Associate Professor, Department of Biochemistry & Biophysics, University of North Carolina at Chapel Hill, USA (1)
BU Bioscience, Wageningen Plant Research, Wageningen UR. the Netherlands (1)
Baylor College of Medicine, Houston, Texas, 77030 (1)
Biological Mass Spectrometry Lab Department of Translational Medicine (DiMeT) Center for Translational Research on Autoimmune & Allergic Diseases - CAAD University of Piemonte Orientale Corso Trieste 15/A, 28100, Novara, Italy (1)
CIR, Queen’s Medical Research Institute, University of Edinburgh (1)
Calico Labs, United States (1)
Central European Institute of Technology, Masaryk University, Brno, Czech Republic National Centre for Biomolecular research, Masaryk University, Brno, Czech Republic (1)
Centre for Cancer Biology, SA Pathology and the University of South Australia, Adelaide SA 5000, Australia (1)
Charles E. Foulds, Ph.D. Assistant Professor Lester and Sue Smith Breast Center Baylor College of Medicine (1)
Chemical & Biomolecular Engineering, Johns Hopkins University (1)
Clinical Research Division, Fred Hutchinson Cancer Reseaarch Center (1)
College of Life Sciences, Northwest University, Xi’an 710069, China (1)
Cullen Laboratory School of Biochemistry University of Bristol, UK (1)
Department Functional Proteomics Medizinisches Proteom-Center Ruhr-University Bochum Building ProDi Gesundheitscampus 4 44780 Bochum Germany (1)
Department of Anatomy and Cell Biology, Université de Sherbrooke, Canada (1)
Department of Anatomy and Neurobiology Virginia Commonwealth University Richmond, VA 23298-0709 USA (1)
Department of Anatomy and Neurobiology, School of Medicine, Virginia Commonwealth University, Richmond, VA USA (1)
Department of Anthropology, University of Oklahoma, USA (1)
Department of Biological Sciences, University of Arkansas, USA (1)

Tags

xref:PubMed:37264201 (1)
xref:PubMed:23289386 (1)

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Untargeted gas chromatography–mass spectrometry-based metabolomics analysis of kidney and liver tissue from the Lewis Polycystic Kidney rat

Polycystic kidney disease (PKD) encompasses a spectrum of inherited disorders that lead to end-stage renal disease (ESRD). There is no cure for PKD and current treatment options are limited to renal replacement therapy and transplantation. A better understanding of the pathobiology of PKD is needed ...

2023-01-26 | MTBLS748 | MetaboLights

Photocatalytic E→Z Contra-Thermodynamic Isomerization of Vinyl Silanes with Lewis Base.

Not available

S-EPMC9541780 | biostudies-literature

Dichotomy of Dosage Compensation along the Neo Z Chromosome of the Monarch Butterfly.

Not available

S-EPMC6901105 | biostudies-literature

Catalytic asymmetric generation of (Z)-disubstituted allylic alcohols.

Not available

S-EPMC2532596 | biostudies-literature

Lewis acid catalyzed spiro annulation of (Z)-3-amino-acrylates with 2-amino arylbenzamides: one-pot synthesis of pyrrole-quinazoline hybrids.

Not available

S-EPMC10187044 | biostudies-literature

Enantioselective Inter- and Intramolecular Sulfenofunctionalization of Unactivated Cyclic and (Z)-Alkenes.

Not available

S-EPMC9851372 | biostudies-literature

Using iPALM to determine protein organisation in cardiac muscle Z-discs.

Not available

S-EPMC13638043 | biostudies-literature

One-pot multicomponent coupling methods for the synthesis of diastereo- and enantioenriched (Z)-trisubstituted allylic alcohols.

Not available

S-EPMC2749706 | biostudies-literature

Enantioselective Nickel-Catalyzed Intramolecular Allylic Alkenylations Enabled by Reversible Alkenylnickel E/Z Isomerization.

Not available

S-EPMC5499723 | biostudies-literature

Pyruvate vs Lactate as electron donor in Sulfate reduction

In order to obtain a global view of energy metabolism pathways of the sulfate-reducer Desulfovibrio vulgaris Hildenborough and the proteins involved therein whole-genome microarrays were used to compare the transcriptional response of cells grown with hydrogen/sulfate, pyruvate/sulfate, lactate/thio...

ORGANISM(S): Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

2008-05-31 | E-GEOD-8071 | biostudies-arrayexpress

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2635 Results

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