Li Mi M - OmicsDI

Show results for

Unknown (3216)
Models (607)
Transcriptomics (107)
Proteomics (76)
Metabolomics (43)
Genomics (26)
Genomic (15)

Organisms

Homo sapiens (308)
Mammalia (53)
Saccharomyces cerevisiae (49)
Mus musculus (49)
cellular organisms (30)
Rattus (26)
Escherichia coli (21)
Oryctolagus cuniculus (17)
Eukaryota (15)
Arabidopsis thaliana (13)
Rattus norvegicus (12)
Cavia porcellus (11)
Drosophila melanogaster (11)
Canis lupus familiaris (9)
Arabidopsis (6)
Chordata (5)
Xenopus laevis (5)
Halobacterium salinarum (5)
Methanosarcina barkeri (4)
Mycobacterium tuberculosis (4)
Mus (3)
Murinae (3)
Embryophyta (3)
Trypanosoma brucei (3)
Lactococcus lactis (3)
Chlamydomonas reinhardtii (3)
Ostreococcus tauri (2)
Blattabacterium sp. (2)
Viridiplantae (2)
Felis catus (2)

Repository

BioModels (607)
biostudies-arrayexpress (117)
pride (49)
MetaboLights (43)
iProX (22)
EGA (16)
dbGaP (15)
MassIVE (5)

Tissue

Cell culture (18)
Fungal asexual spore (4)
Heart (4)
Brain (4)
Primary cell (3)
Epithelial cell (3)
Blastopore (2)
Conidium (2)
Keratinocyte (2)
Skin (2)
Kidney (2)
Monocyte (2)
Prostate epithelium (1)
Vermiform appendix (1)
Brown adipocyte (1)
Frond (1)
Ileum (1)
Prefrontal cortex (1)
Mammary gland (1)
Pluripotent stem cell (1)
Skin epidermis (1)
Prostate gland (1)
HEK-293T cell (1)
Seed (1)
Oocyte (1)
Spinal cord (1)
Cell suspension culture (1)
Leaf (1)
Fibroblast (1)
B cell (1)

Disease

Diabetes mellitus (15)
Parkinson's disease (3)
Glioblastoma (3)
Bacterial infectious disease (2)
Calcium metabolism disease (2)
Glucocorticoid-remediable aldosteronism (2)
Polycythemia due to hypoxia (2)
Neurodegenerative disease (2)
Heart disease (2)
Human immunodeficiency virus infectious disease (2)
Type 2 diabetes mellitus (2)
Prostate adenocarcinoma (2)
Cardiovascular system disease (2)
Disease free (2)
Andersen-Tawil syndrome (1)
Brugada syndrome (1)
Type 1 diabetes mellitus (1)
Fatty liver disease (1)
Coronary artery disease (1)
Liver disease (1)
Mature T-cell and NK-cell lymphoma (1)
Down syndrome (1)
Alzheimer's disease (1)
Neonatal abstinence syndrome (1)
Amyloidosis (1)
Benign nevi (1)
Lung squamous cell carcinoma (1)
Adenocarcinoma (1)
Acute myocardial infarction (1)
Mastitis (1)

Technology Type

Mass Spectrometry (49)
Mass spectrometry (37)
Shotgun proteomics (28)
Affinity purification coupled with mass spectrometry proteomics (7)
Bottom-up proteomics (6)
Gel-based experiment (5)
Mass spectrometry assay (4)
Data-dependent acquisition (4)
NMR spectroscopy (3)
SWATH MS (2)
Data-independent acquisition (2)
Illumina HumanExome-12v1_A-GenCall, zCall, GenoSNP, - Illuminus (1)
MSE (1)
Top-down proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (12)
Liquid Chromatography MS - negative - reverse phase (12)
Gas Chromatography MS - Positive (GC-MS (Positive)) (4)
Tandem Gas Chromatography MS - positive (3)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (3)
Gas Chromatography MS - positive (3)
Liquid Chromatography MS - positive - hilic (3)
Illumina HiSeq 2000 (2)
TimsTOF Pro (2)
Q Exactive Plus (2)
Tandem Gas Chromatography MS - (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Bruker (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Liquid Chromatography MS - positive - reverse-phase (2)
Liquid Chromatography MS - negative - reverse-phase (2)
Liquid Chromatography MS - negative - hilic (2)
GeneChip Scanner 2500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 3000 (1)
NextSeq 500 (1)
Leco Pegasus III (1)
Agilent5975C (1)
Agilent 7890 (1)
Gas Chromatography MS - positive - medium polarity - Agilent 6890 GC - LECO Pegasus III TOF MS (LECO) (1)
Liquid Chromatography MS - alternating – hilic (1)
PEGASUS HT GC-MS (LECO) (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Exactive (Thermo Scientific) (1)

Publication Date

2005 (372)
2024 (250)
2013 (21)
2023 (18)
2012 (18)
2022 (18)
2025 (16)
2018 (14)
2021 (13)
2010 (13)
2014 (12)
2011 (11)
2015 (10)
2009 (9)
2016 (8)
2008 (7)
2020 (7)
2007 (6)
2026 (5)
2017 (4)
2019 (3)

UNIPROT ID/AC

P04637 (9)
Q00987 (9)
P24864 (8)
P01308 (7)
P07663 (7)
P06400 (6)
P53197 (6)
P26309 (6)
P24869 (6)
P24941 (5)
P00549 (5)
P04806 (5)
P00560 (5)
P16862 (5)
P16861 (5)
P00924 (5)
P00950 (5)
P00360 (5)
P06169 (5)
P12709 (5)
P14540 (5)
P20438 (5)
P30283 (5)
P38634 (5)
Q01094 (4)
P22434 (4)
P06776 (4)
Q06147 (4)
Q12246 (4)
P50107 (4)

ENSEMBL ID

ENSG00000139318 (1)
ENSG00000168646 (1)
ENSBTAG00000027439.2 (1)
ENSBTAG00000019002.3 (1)
ENSBTAG00000039197.1 (1)
ENSBTAG00000016592.4 (1)
ENSBTAG00000038586.1 (1)
ENSBTAG00000035544.2 (1)
ENSBTAG00000016679.4 (1)
ENSBTAG00000011545.3 (1)
ENSBTAG00000001124.4 (1)
ENSBTAG00000011197.4 (1)
ENSBTAG00000016432.4 (1)
ENSBTAG00000014841.4 (1)
ENSBTAG00000015596.4 (1)
ENSBTAG00000014775.4 (1)
ENSBTAG00000020902.4 (1)
ENSBTAG00000030358.2 (1)
ENSBTAG00000006463.4 (1)
ENSBTAG00000006029.3 (1)
ENSBTAG00000014179.4 (1)
ENSBTAG00000021417.4 (1)
ENSBTAG00000001299.4 (1)
ENSBTAG00000004059.3 (1)
ENSBTAG00000015188.3 (1)
ENSBTAG00000008567.4 (1)
ENSBTAG00000015164.4 (1)
ENSBTAG00000012858.3 (1)
ENSBTAG00000007228.4 (1)
ENSBTAG00000006066.4 (1)

CHEBI ID

CHEBI:15422 (39)
CHEBI:16761 (33)
CHEBI:29108 (32)
CHEBI:16027 (27)
CHEBI:17754 (27)
CHEBI:33699 (25)
CHEBI:17234 (23)
CHEBI:16908 (21)
CHEBI:15361 (19)
CHEBI:15846 (19)
CHEBI:16108 (19)
CHEBI:15996 (18)
CHEBI:17552 (18)
CHEBI:17794 (17)
CHEBI:18367 (16)
CHEBI:16001 (15)
CHEBI:29052 (14)
CHEBI:17835 (14)
CHEBI:17665 (14)
CHEBI:16526 (14)
CHEBI:18021 (14)
CHEBI:16236 (13)
CHEBI:15343 (13)
CHEBI:16905 (13)
CHEBI:36080 (12)
CHEBI:15351 (12)
CHEBI:16084 (12)
CHEBI:28013 (11)
CHEBI:16595 (10)
CHEBI:15346 (10)

Metabolite Name

Hypoxanthine (10)
Asparagine (8)
Creatinine (8)
L-Phenylalanine (8)
Uracil (7)
L-Malic acid (7)
Ornithine (7)
Stearic acid (7)
Oleamide (7)
Guanine (7)
Proline (7)
Phenylalanine (7)
Isoleucine (7)
Xanthine (7)
Inosine (7)
Ethanolamine (6)
Pyruvic acid (6)
D-Glucose (6)
Leucine (6)
Threonic acid (6)
Uracil (6)
Valine (6)
Thymine (6)
Pyroglutamic acid (6)
Pantothenic acid (6)
L-Histidine (6)
Tyrosine (6)
Cytosine (6)
Palmitic acid (6)
Glutamine (6)

IsPrivate

False (607)

Model Flag

Non Kinetic (72)
Non Miriam (14)
Sbml Extended (3)

Submitter Keywords

FROG (2)
TransQST (1)
Immuno-oncology (1)

Modelling Approach

Ordinary differential equation model (546)
Delayed differential equation model (2)
Constraint-based model (2)

Study type

Transcription profiling by array (76)
RNA-seq of coding RNA (12)
ChIP-seq (6)
RNA-seq of non coding RNA (5)
Methylation profiling by array (4)
Methylation profiling by high throughput sequencing (4)
Comparative genomic hybridization by array (3)
ChIP-chip by tiling array (2)
Transcription profiling by SAGE (1)
Animal - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2023 (376)
2025 (373)
2021 (356)
2024 (329)
2022 (302)
2020 (293)
2019 (208)
2018 (179)
2017 (159)
2016 (125)
2015 (120)
2014 (104)
2013 (89)
2012 (67)
2010 (54)
2026 (54)
2011 (51)
2009 (34)
2008 (21)
2007 (15)
2006 (9)
2005 (6)
2003 (5)
2004 (2)
1999 (2)

Lab affiliation

Biotechnology Research Center, No.2 Tiansheng Road, BeiBei District, Chongqing, 400715,P.R.China (4)
Head of System Biology Lab. at Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Russia (3)
Human Phenome Institute,Zhangjiang FudanInternational Innovation Center, Fudan UniversityShanghai, 201203, China. (2)
Department of Molecular & Integrative Physiology,University of Michigan Medical School, 5325 Brehm Tower, 1000 Wall St., Ann Arbor, MI, 48105 (2)
Medicine and Pharmacy Research Center, Binzhou Medical University (1)
State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100037, China (1)
Department for Neurodegenerative Science Van Andel Institute Grand Rapids, MI (1)
Center for Neurodegenerative Science, Van Andel Institute, Grand Rapids, MI, 49503 USA (1)
University of Michigan Medical School, Department of Biological Chemistry, Ann Arbor, MI (1)
Assistant Professor of Neurology and Angela Dobson and Lyndon Welch Professor of Neurology Department of Neurology | University of Michigan Health System 109 Zina Pitcher Place, 5015 BSRB | Ann Arbor, MI | 48109 (1)
Molecular Pharmacology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, NY, USA. (1)
Center for Neurodegenerative Science Van Andel Research Institute 333 Bostwick Ave N.E., Rm 5051 Grand Rapids, MI 49503 Tel: 616-234-5262 ext. 5262 | Email: viviane.labrie@vai.org Lab website: http://labrielab.vai.org/ (1)
Children's Hospital of Nanjing Medical University (1)
Department of Rheumatology and Inflammation research, Sahlgrenska academy, Gothenburg University, Gothenburg, Sweden (1)
Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen (1)
Associate Professor of Chemistry Dow Early Career Professor of Chemistry Associate Director of the Program in Chemical Biology Co-Director the Chemical Biology Interface Training Program University of Michigan 930 N University Ann Arbor, MI 48109 (1)
Jiangnan University (1)
Shandong Provincial Hospital for Skin Diseases & Shandong Provincial Institute of Dermatology and Venereology, Shandong First Medical University & Shandong Academy of Medical Sciences (1)
Department of Physiology and Biophysics University of Mississippi Medical Center (1)
Department of Hepatology, Tianjin Second People’s Hospital, Tianjin, China. Tianjin Research Institute of Liver Diseases, Tianjin, China. (1)
Department of Pharmacology, University of Michigan Medical School, Ann Arbor, MI (1)
Division of Metabolism, Endocriology & Diabetes and Department of Internal Medicine, University of Michigan, Ann Arbor, MI, 48105, USA (1)
MSD Singapore (1)
Department of Medicine, Section of Dermatology, University of Chicago, Chicago, IL, USA (1)
Binzhou Medical University (1)
State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China (1)
School of Pharmacy and Department of Chemistry, University of Wisconsin-Madison (1)
Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai, China. (1)
State Key Laboratory of Frigid Zone Cardiovascular Diseases (SKLFZCD), Department of Pharmacology (State Key Labratoray -Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), College of Pharmacy, Harbin Medical University, Harbin 150081, China. (1)
Zhejiang University School of Medicine (1)

Previous page
1 / 409
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 409
Next page

Sort by:

Relevance

Page size

Thrombopoietin (TPO) protects against heart damage induced infarction in rat model

In order to examine the mechanism of TPO on cardiac protection against myocardial infarction damage (MI), we have employed whole genome microarray expression profiling as a discovery platform to identify genes with the potential to delineate the TPO cardioprotective mechanism against infarction. MI ...

ORGANISM(S): Rattus norvegicus

2012-12-01 | E-GEOD-22489 | biostudies-arrayexpress

Mi-2β promotes immune evasion in melanoma by activating EZH2 methylation

For identification of Mi-2β-interacting proteins, B16F10 cells (1 × 108) were collected and washed three times with PBS and lysed in lysis buffer on ice for 30 min. Cell lysates were collected and then isolated over night by anti-Mi-2β magnetic agarose beads. The anti-Mi-2β magnetic agarose beads we...

ORGANISM(S): Mus Musculus

2024-02-18 | PXD049467 |

Genome-wide profiling of gene expression under electro-acupuncture treatment on MI heart in rats

Purpose: Acupuncture exerts cardioprotective effects on several types of cardiac injuries, especially myocardial ischemia (MI). In order to elucidate the potential mechanisms, RNA-seq by next generation sequencing was used to identify the rat genome-wide alterations after MI and EA treatment in t...

ORGANISM(S): Rattus norvegicus

2016-03-21 | E-GEOD-54132 | biostudies-arrayexpress

Bone Morphogenetic Protein 9 Protects against Myocardial Infarction by Improving Lymphatic Drainage Function and Triggering DECR1-Mediated Mitochondrial Bioenergetics

We investigated the impact of both BMP9 deficiency and replenishment on the pathogenesis of MI in mice. Our results showed an aggravated pathological phenotype of MI in BMP9 knockout (KO) mice, which can be alleviated by replenishment of BMP9. Therefore, we further investigated the mechanism whereby...

ORGANISM(S): Mus Musculus

PXD051517 |

Gene expression following myocardial infarction with and without stem cell transplantation

Background: Bone marrow-derived multipotent progenitor cell (MPC) transplantation leads to short term functional and bioenergetic improvement in a porcine model of postinfarction Left Ventricular (LV) remodeling despite a low engraftment rate. However, the long term outcome after MPC transplantation...

ORGANISM(S): Sus scrofa

2010-04-12 | E-GEOD-14643 | biostudies-arrayexpress

Targeted Metabolomics Provide Chemotaxonomic Insights of Medicago ruthenica, with Coupled Transcriptomics Elucidating the Mechanism Underlying Floral Coloration.

Not available

S-EPMC9505912 | biostudies-literature

Small RNAs in Chlamydomonas reinhardtii

RNA populations in Chlamydomonas reinhardtii Keywords: Highly parallel pyrosequencing Small RNAs were prepared from Chlamydomonas reinhardtii total extracts,ligated to a 3' adaptor and a 5' acceptor sequentially, and then RT-PCR amplified. PCR products were reamplified using a pair of 454 cloning pr...

ORGANISM(S): Chlamydomonas reinhardtii

2007-05-15 | E-GEOD-7308 | biostudies-arrayexpress

Expression data from C57BL/6J and MRL/MpJ hearts following acute myocardial infarction

The Murphy Roth Large (MRL) mouse, a strain capable of regenerating right ventricular myocardium, has a high post-myocardial infarction (MI) survival rate compared with C57BL6/J (C57) mice. The biological processes responsible for this survival advantage are unknown. We compared acute post-MI gene e...

ORGANISM(S): Mus musculus

2010-05-27 | E-GEOD-19322 | biostudies-arrayexpress

Fast Li-Ion Conduction in Spinel-Structured Solids.

Not available

S-EPMC8124195 | biostudies-literature

Mi-2β promotes immune evasion in melanoma by activating EZH2 methylation.

Not available

S-EPMC10924921 | biostudies-literature

Previous page
1 / 409
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 409
Next page

Sort by:

Relevance

Page size

4090 Results

Show results for

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

IsPrivate

Model Flag

Submitter Keywords

Modelling Approach

Study type

Release Date

Lab affiliation

OmicsDI is part of the ELIXIR infrastructure

Tweets