Li Si S - OmicsDI

Show results for

Unknown (2103)
Transcriptomics (75)
Proteomics (47)
Metabolomics (19)
Genomics (3)
Genomic (2)
Models (1)

Organisms

Homo sapiens (42)
Andropogon gerardi (23)
Mus musculus (20)
Dictyostelium discoideum (4)
cellular organisms (3)
Arabidopsis thaliana (3)
Apis mellifera (2)
Zea mays (2)
Rattus norvegicus (2)
Pseudoalteromonas sp. SM9913 (1)
Amycolatopsis mediterranei S699 (1)
Oryza longistaminata (1)
Populus x canadensis (1)
Salmonella enterica (1)
Chlamydomonas reinhardtii (1)
Streptococcus suis (1)
Schizosaccharomyces pombe (1)
Oryza sativa (1)
Saccharomyces cerevisiae S288C (1)
Pseudomonas aeruginosa PAO1 (1)
Saccharomyces cerevisiae (1)
Sus scrofa (1)
Danio rerio (1)
Bos taurus (1)
Neurospora crassa OR74A (1)
Phaeodactylum tricornutum (1)
Spirometra erinaceieuropaei (1)
Streptomyces (1)
Sus scrofa domesticus (1)
Sus scrofa scrofa (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (77)
pride (23)
MetaboLights (18)
iProX (17)
MassIVE (3)
dbGaP (2)
jPOST (2)
PeptideAtlas (2)
BioModels (1)
GNPS (1)
ENA (1)

Tissue

Cell culture (5)
Blood serum (3)
Others (2)
Blood plasma (2)
Root (2)
Blood cancer cell (1)
Blood cell (1)
Bone cancer cell line (1)
Brain cancer cell line (1)
Breast cancer cell (1)
Breast cancer cell line (1)
Cecum cancer cell line (1)
Cell suspension culture (1)
Cervical cancer cell line (1)
Colonic cancer cell (1)
Colorectal cancer cell line (1)
Endothelial cell of umbilical vein (1)
Enterocyte (1)
Fibroblast (1)
Heart (1)
Hepatocyte (1)
Kidney (1)
Kidney cancer cell (1)
Liver (1)
Liver cancer cell (1)
Lymph node (1)
Midgut (1)
Ovary cancer cell (1)
Ovary cancer cell line (1)
Permanent cell line cell (1)

Disease

Disease free (3)
Breast cancer (2)
Colon cancer (2)
Inoculated with P. syringae pv. tomato strain DC3000 + avrRps4 (1)
Benign nevi (1)
Malignant neoplasm of ovary (1)
Mixed disorder as reaction to stress (1)
Oropharynx cancer (1)
Paranoid schizophrenia (1)
Prostate adenocarcinoma (1)
Squamous cell carcinoma (1)

Technology Type

Mass Spectrometry (23)
Mass spectrometry (15)
HDMSE (7)
Shotgun proteomics (7)
MSE (6)
Bottom-up proteomics (3)
Mass spectrometry assay (2)
All-ion fragmentation (2)
Data-dependent acquisition (2)
NMR spectroscopy (1)
Affinity purification coupled with mass spectrometry proteomics (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (7)
Liquid Chromatography MS - positive - reverse phase (5)
Illumina HiSeq 2500 (3)
LTQ Orbitrap Velos (3)
Illumina NovaSeq 6000 (2)
NextSeq 500 (2)
Q Exactive (2)
SYNAPT G2-Si (2)
TSQ Altis (2)
Xevo G2 XS Tof (2)
Xevo G2-XS QTof (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Liquid Chromatography MS - positive - hilic (2)
KAPA RNA HyperPrep Kit (1)
GenePix Professional 4200A [Axon Instruments] (1)
RNeasy Mini Kit (1)
N/a (1)
NextSeq 2000 (1)
Illumina HiSeq 1500 (1)
NextSeq 550 (1)
Q Exactive Plus (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
MS Imaging - (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2014 (16)
2024 (13)
2022 (12)
2015 (9)
2010 (9)
2023 (9)
2011 (8)
2026 (6)
2021 (6)
2019 (6)
2012 (6)
2025 (6)
2009 (5)
2020 (5)
2017 (4)
2013 (4)
2008 (3)
2016 (2)
2007 (2)
2006 (2)
2004 (2)
2018 (2)

UNIPROT ID/AC

A0A024R563 (2)
A0A024R8H9 (2)
A0A024RAN2 (2)
A0A024RC46 (2)
A0A075B6P5 (2)
A0A087WTX5 (2)
A0A087WUD1 (2)
A0A087WVW2 (2)
A0A087WVZ5 (2)
A0A087WWK8 (2)
A0A087WXI0 (2)
A0A087WYL9 (2)
A0A087WZE9 (2)
A0A087X130 (2)
A0A087X1S3 (2)
A0A087X1V9 (2)
A0A0A0MR66 (2)
A0A0A0MS07 (2)
A0A0A0MS51 (2)
A0A0A0MSA7 (2)
A0A0B4J1V0 (2)
A0A0B4J220 (2)
A0A0C4DG89 (2)
A0A0C4DGT3 (2)
A0AVT1 (2)
A0FGR8 (2)
A0FGR8-2 (2)
A0FGR8-6 (2)
A0JNW5 (2)
A0M8Q6 (2)

ENSEMBL ID

ENSG00000147251 (2)
ENSG00000170477 (2)
ENSG00000247315 (2)

CHEBI ID

CHEBI:15428 (7)
CHEBI:17126 (5)
CHEBI:15741 (5)
CHEBI:16335 (5)
CHEBI:15971 (5)
CHEBI:16015 (5)
CHEBI:30769 (5)
CHEBI:15611 (4)
CHEBI:17724 (4)
CHEBI:17562 (4)
CHEBI:16977 (4)
CHEBI:6650 (4)
CHEBI:16865 (4)
CHEBI:18347 (4)
CHEBI:17750 (4)
CHEBI:18019 (4)
CHEBI:17203 (4)
CHEBI:16704 (4)
CHEBI:17053 (4)
CHEBI:18012 (4)
CHEBI:16027 (4)
CHEBI:16414 (4)
CHEBI:15603 (4)
CHEBI:14575 (1)
CHEBI:23008 (1)
CHEBI:17158 (1)
CHEBI:15366 (1)
CHEBI:30751 (1)
CHEBI:28757 (1)
CHEBI:17234 (1)

Metabolite Name

Glycine (5)
Adenosine (5)
Lysine (4)
Malic acid (4)
Tyrosine (4)
Linoleic acid (4)
Glutamine (4)
Cytidine (4)
Guanosine (4)
Uridine (4)
Anserine (3)
Leucine (3)
Valine (3)
Betaine (3)
Carnitine (3)
Benzoic acid (3)
Methionine (3)
Citric acid (3)
Serine (3)
Alanine (3)
Sarcosine (3)
Proline (3)
Palmitic acid (3)
Adenine (3)
Aspartic acid (3)
Tryptophan (3)
Lauric acid (2)
Caffeine (2)
Cystathionine (2)
Lactic acid (2)

First Public Date

2023 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

1 Department of Otorhinolaryngology - Head and Neck Surgery, University of Helsinki and HUS Helsinki University Hospital, P.O.Box 263, FI-00029 HUS, Helsinki, Finland 2 Department of Biosciences and Nutrition, Karolinska Institutet, SE-171 76, Stockholm, Sweden. 3 Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki, Finland. (1)
1 Max-Planck Institute for Terrestrial Microbiology, Karl-von-Frisch Strasse 14, 35043 Marburg, Germany 2 University of Marburg, Center for Synthetic Microbiology (SYNMIKRO) & Departments of Chemistry and Biology, Karl-von-Frisch Strasse 14, 35043 Marburg, Germany (1)
1. Department of Pharmacology (National Key Laboratory of Frigid Zone Cardiovascular Disease, Key Laboratory of Cardiovascular Research, Ministry of Education), College of Pharmacy, Harbin Medical University (1)
Biotechnology Center, National Chung-Hsing University, Taichung 402, Taiwan (1)
Center for Synthetic Microbiology (SYNMIKRO) & Department of Chemistry, Philipps-University Marburg, Marburg, Germany (1)
College of Agronomy, Gansu AgriculturalUniversity, Lanzhou 730070, China (1)
College of Environment and Ecology, Xiamen University, China (1)
Department of Biomedical Engineering, College of Life Science and Technology, Huazhong University of Science and Technology, N0. 1037 Luoyudong Road, Hongshan District, Wuhan 430074 (1)
Department of Chemistry and Bioscience Aalborg University Denmark (1)
Department of Chemistry, University of Marburg, 35043 Marburg, Germany Center for Synthetic Microbiology (SYNMIKRO), 35043 Marburg, Germany Max Planck Fellow Group Molecular Physiology of Microbes, Max Planck Institute for Terrestrial Microbiology, 35043 Marburg, Germany (1)
Department of Obstetrics and Gynecology, University of Wisconsin-Madison, WI,USA. (1)
Dept. Cell Biology and Molecular Medicince, Rutgers-New Jersey Mediccal School, Newark NJ (1)
Dept. of Biochemistry, Laboratory of Neuroproteomic, Biology Institute, Brazil (1)
European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI) (1)
Henan Institute of Medical and Pharmaceutical Sciences, Zhengzhou University (1)
Institute of Biothermal Science and Technology, School of Medical Instruments and Food Engineering, University of Shanghai for Science and Technology (1)
Lab head (1)
Laboratory of Neuroproteomics, Institute of Biology, Department of Biochemistry and Tissue Biology, University of Campinas (UNICAMP), Campinas, SP, Brazil. UNICAMP’s Neurobiology Center, Campinas, SP, Brazil Instituto Nacional de Biomarcadores em Neuropsiquiatria (INBION) Conselho Nacional de Desenvolvimento Científico e Tecnológico, São Paulo, Brazil (1)
Max Planck Institute for Heart and Lung Research, Laboratory for Cell Polarity and Organogenesis, Germany (1)
Michael Popp Institute, University of Innsbruck, Austria (1)
Sydney Pharmacy School, The University of Sydney, NSW 2006, Australia (1)
University Marburg, Center for Synthetic Microbiology (SYNMIKRO) & Department of Chemistry, Karl-von-Frisch Strasse 14, 35043 Marburg, Germany (1)
the First Affiliated Hospital of Shenzhen University (1)