Li Xiao X - OmicsDI

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Unknown (8706)
Proteomics (327)
Transcriptomics (92)
Metabolomics (43)
Genomics (22)
Models (2)

Organisms

Homo sapiens (154)
Mus musculus (62)
Drosophila melanogaster (9)
Arabidopsis thaliana (8)
Oryza sativa (5)
Severe acute respiratory syndrome coronavirus 2 (5)
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synthetic construct (2)
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(Populus alba x Populus glandulosa) x Populus tomentosa (1)
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Anaplasma sp. goatC/1 (1)
Apostichopus japonicus (1)

Repository

iProX (171)
pride (127)
biostudies-arrayexpress (103)
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Tissue

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Disease

Wounds and Injuries (4)
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Disease free (2)
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Alzheimer's disease (1)
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Brain cancer (1)
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Urinary bladder cancer (1)

Technology Type

Mass Spectrometry (127)
Shotgun proteomics (55)
Mass spectrometry (33)
Bottom-up proteomics (22)
Affinity purification coupled with mass spectrometry proteomics (14)
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Proteogenomics (6)
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SWATH MS (4)
NMR spectroscopy (3)
All-ion fragmentation (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Immunopeptidomics (2)
SRM/MRM (2)
Top-down proteomics (2)
Illumina OncoArray (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (20)
Liquid Chromatography MS - positive - reverse phase (18)
Liquid Chromatography MS - positive - hilic (5)
Liquid Chromatography MS - negative - hilic (3)
Orbitrap Fusion Lumos (2)
Q Exactive HF (2)
TripleTOF 6600 (2)
Liquid Chromatography MS - - reverse phase (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - alternating - reverse phase (2)
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Illumina HiSeq 4000 (1)
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Liquid Chromatography MS - negative – rp (1)
Liquid Chromatography MS - positive – rp (1)
GC色Agilent 7890A, Agilent ,LECOChroma TOF PEGASUS HT, LECO (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
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Nuclear Magnetic Resonance (NMR) (1)
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Publication Date

2021 (60)
2024 (57)
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2022 (56)
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2020 (41)
2026 (30)
2014 (25)
2015 (19)
2012 (17)
2013 (16)
2019 (13)
2016 (12)
2010 (10)
2018 (8)
2017 (4)
2011 (3)
2008 (2)
2006 (2)
2009 (1)

UNIPROT ID/AC

1433B_HUMAN (17)
1433E_HUMAN (17)
1433F_HUMAN (17)
1433G_HUMAN (17)
1433S_HUMAN (17)
1433T_HUMAN (17)
1433Z_HUMAN (17)
2A5A_HUMAN (17)
2A5D_HUMAN (17)
2A5E_HUMAN (17)
2A5G_HUMAN (17)
2AAA_HUMAN (17)
2ABA_HUMAN (17)
2ABD_HUMAN (17)
3BHS2_HUMAN (17)
3BP1_HUMAN (17)
3BP5L_HUMAN (17)
3HAO_HUMAN (17)
Q9LIE5 (1)
O24646 (1)
Q9FFA7 (1)
Q9LTJ6 (1)
Q9FN03 (1)
Q8LGH4 (1)
Q9M086 (1)
Q9SYX2 (1)
P43254 (1)
P07659 (1)
P00573 (1)
P42212 (1)

CHEBI ID

CHEBI:30769 (15)
CHEBI:16704 (12)
CHEBI:16919 (12)
CHEBI:15756 (12)
CHEBI:17351 (11)
CHEBI:16708 (10)
CHEBI:17750 (10)
CHEBI:16196 (10)
CHEBI:17568 (10)
CHEBI:27897 (10)
CHEBI:15354 (10)
CHEBI:17368 (10)
CHEBI:55328 (9)
CHEBI:28875 (9)
CHEBI:15741 (9)
CHEBI:30915 (9)
CHEBI:17154 (9)
CHEBI:16335 (9)
CHEBI:17895 (9)
CHEBI:17596 (9)
CHEBI:28716 (9)
CHEBI:30805 (8)
CHEBI:17748 (8)
CHEBI:16610 (8)
CHEBI:28834 (8)
CHEBI:17405 (8)
CHEBI:42504 (8)
CHEBI:33697 (1)
CHEBI:17535 (1)
CHEBI:33699 (1)

Metabolite Name

Adenine (10)
Hypoxanthine (10)
Citric acid (9)
Uridine (9)
Creatine (9)
Uracil (8)
Spermidine (8)
Palmitic acid (8)
Linoleic acid (8)
Creatinine (8)
Inosine (8)
Ascorbic acid (7)
Deoxycholic acid (7)
Adenosine (7)
Riboflavin (7)
Uric acid (7)
Guanosine (7)
Spermine (6)
Kynurenic acid (6)
Piperidine (6)
Pyridoxamine (6)
Taurine (6)
Cholic acid (6)
Pantothenic acid (6)
Oleamide (6)
Guanine (6)
Cytosine (6)
Tetradecanedioic acid (6)
Oleic acid (6)
Hexadecanedioic acid (6)

IsPrivate

False (2)

Modelling Approach

Ordinary differential equation model (2)

Study type

Transcription profiling by array (47)
RNA-seq of coding RNA (29)
ChIP-seq (9)
Other (6)
ChIP-chip by array (3)
RNA-seq of non coding RNA (3)
Comparative genomic hybridization by array (2)
Methylation profiling by high throughput sequencing (2)
ChIP-chip by tiling array (1)
Methylation profiling by array (1)

Release Date

2025 (1427)
2022 (1270)
2023 (1162)
2024 (1021)
2021 (948)
2020 (647)
2019 (444)
2018 (399)
2017 (337)
2016 (273)
2026 (209)
2015 (201)
2014 (148)
2013 (89)
2012 (86)
2011 (52)
2010 (33)
2009 (24)
2008 (12)
2007 (9)
2006 (7)
2005 (4)
2004 (3)
2001 (2)
2003 (1)
2002 (1)

Lab affiliation

Biological Science Research Center, Southwest University, Chongqing, 400715, China (3)
Key Laboratory of Brain Functional Genomics of Shanghai and Ministry of Education, Institute of Brain Functional Genomics, School of Life Science and the Collaborative Innovation Center for Brain Science, East China Normal University, Shanghai, China (3)
State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan,Hubei 430062, China (3)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (3)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
Department of Fisheries, College of Animal Science and Technology, Hunan agriculture university (2)
Guangdong Pharmaceutical University (2)
Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China (2)
Institute of Dermatology, Chinese Academy of Medical Sciences and Peking Union Medical College, 210042 Nanjing, China. (2)
Institute of Genetics & Developmental Biology, Chinese Academy of Sciences (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing 211166, Jiangsu, China (2)
Wuhan University (2)
1Department of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, OH, 44106 (1)
3Centers for Proteomics & Artificial Intelligence and Clinical Mass Spectrometry, Allegheny Health Network Cancer Institute, Allegheny Health Network, Pittsburgh, PA15202, USA (1)
Academy of Orthopedics, Guangdong Province, Guangdong Provincial Key Laboratory of Bone and Joint Degeneration Diseases, The Third Affiliated Hospital of Southern Medical University, Guangzhou, Guangdong, China (1)
Acupuncture and Tuina School/Third Teaching Hospital, Chengdu University of Traditional Chinese Medicine (1)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (1)
Biological Science Research Center, Southwest University, Chongqing, 400715, China. (1)
Center for Proteomics & Artificial Intelligence Center for Clinical Mass Spectrometry Allegheny Health Network Cancer Institute 100 S Jackson Ave., Pittsburgh, PA 15202 (1)
Center for Proteomics & Artificial Intelligence, Allegheny Health Network Cancer Institute, Pittsburgh, PA 15202, USA (1)
Center for Translational Research in Hematological Malignancies, Houston Methodist Neal Cancer Center, Houston Methodist Academic Institute (1)
Center of Growth, Metabolism and Aging, Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, China (1)
Children's hospitall of Chongqing medical university China (1)
Chinese Academy of Agricultural Science (1)
City University of New York (CUNY) Hunter College, Chair of the Molecular Cellular and Developmental PhD subprogram at the CUNY Graduate Center (1)
College of Food Science & Technology, Nanjing Agricultural University, Weigang 1#, Nanjing, 210095, P.R. China (1)
College of Pharmacy, Jinan University, Guangzhou 510632, P. R. China (1)
College of Veterinary Medicine, Huazhong Agricultural University (1)
Department of Anesthesiology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, P.R. China. (1)

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Transcription profiling of mouse mammary gland of Brca and p53 mutants to identifu Brca1 regulated X-linked genes

We compared the expression levels of X-linked genes in the mammary glands of Brca1ï„11/ï„11p53+/- mutant and control (p53+/-) mice at three different stages of the mammary cycle: virgin, pregnant day 16.5, and lactation day 1, using a cDNA microarray. In about 690 X-linked genes that are expresse...

ORGANISM(S): Mus musculus

2008-06-14 | E-GEOD-5861 | biostudies-arrayexpress

Stepwise evolution of two giant composite LTR-retrotransposon-like elements DA and Xiao.

Not available

S-EPMC2700803 | biostudies-literature