Li Xu X - OmicsDI

Show results for

Unknown (31242)
Proteomics (635)
Transcriptomics (166)
Metabolomics (99)
Genomics (60)
Multiomics (3)
Models (1)
Other (1)

Organisms

Homo sapiens (273)
Mus musculus (122)
Rattus norvegicus (13)
Arabidopsis thaliana (10)
Gallus gallus (7)
Oryza sativa (6)
Zea mays (5)
Citrus sinensis (3)
Ovis aries (3)
Caenorhabditis elegans (3)
Bombyx mori (3)
Actinobacillus pleuropneumoniae serovar 1 str. 4074 (2)
Actinobacillus pleuropneumoniae (2)
Schizosaccharomyces pombe (2)
Drosophila melanogaster (2)
Actinobacillus pleuropneumoniae serovar 3 str. JL03 (1)
Penicillium oxalicum (1)
Agrobacterium tumefaciens (1)
Oreochromis niloticus (1)
Nannochloropsis oceanica (1)
Rhodococcus opacus (1)
Hevea brasiliensis (1)
Brassica oleracea (1)
Mustela putorius furo (1)
Capra hircus (1)
Bemisia tabaci (1)
Siniperca chuatsi (1)
Macaca mulatta (1)
Clonorchis sinensis (1)
Drosophila simulans (1)

Organisms

Sus scrofa (1)
Mus musculus (1)

Repository

iProX (301)
pride (301)
biostudies-arrayexpress (204)
MetaboLights (95)
MassIVE (25)
EGA (20)
PeptideAtlas (5)
GNPS (4)
PAXDB (2)
ENA (2)
BioModels (1)
GPMDB (1)
jPOST (1)

Tissue

Cell culture (70)
Liver (22)
Epithelial cell (20)
Brain (17)
Testis (11)
Permanent cell line cell (10)
Whole body (10)
Hepatocyte (9)
Leaf (9)
Lung (7)
Blood cell (6)
Blood plasma (6)
Colon (6)
Heart (6)
Sperm (6)
B cell (5)
Bone marrow (5)
Kidney (5)
Stem cell (5)
Blood (4)
Blood serum (4)
Embryo (4)
HeLa cell (4)
Plant cell (4)
Retina (4)
T cell (4)
Others (3)
HEK-293T cell (3)
Pancreas (3)
Male Reproductive System (2)

Disease

Disease free (11)
Breast cancer (7)
Acute leukemia (3)
Cervix carcinoma (3)
Colon cancer (3)
Hepatocellular carcinoma (3)
Non-alcoholic steatohepatitis (3)
Autism spectrum disorder (2)
Cardiovascular system disease (2)
Liver cancer (2)
Lung adenocarcinoma (2)
Stomach cancer (2)
Stomach carcinoma (2)
Not Available (1)
Alzheimer's disease (1)
Bacterial infectious disease (1)
Bladder transitional cell carcinoma (1)
Brain glioblastoma multiforme (1)
Cholangiocarcinoma (1)
Diarrhea (1)
Endocervical adenocarcinoma (1)
Endometrial Endometrioid Adenocarcinoma (1)
Gastric adenocarcinoma (1)
Herpes zoster (1)
Liver cirrhosis (1)
Lung cancer (1)
Lymphoma (1)
Malignant neoplasm of ovary (1)
Myopia (1)
Parkinson's disease (1)

Technology Type

Mass Spectrometry (301)
Shotgun proteomics (165)
Mass spectrometry (82)
Affinity purification coupled with mass spectrometry proteomics (38)
Bottom-up proteomics (27)
Gel-based experiment (26)
Data-dependent acquisition (21)
SWATH MS (12)
Mass spectrometry assay (11)
Data-independent acquisition (11)
Top-down proteomics (9)
SRM/MRM (5)
Mass spectrometry imaging (4)
All-ion fragmentation (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
NMR spectroscopy (2)
Affinity proteomics (2)
Proteogenomics (2)
Affymetrix/Illumina (1)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
DiaPASEF (1)
RNA mass spectrometry (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (47)
Liquid Chromatography MS - negative - reverse phase (44)
Liquid Chromatography MS - negative - hilic (10)
Liquid Chromatography MS - positive - hilic (10)
Q Exactive HF (9)
Q Exactive HF-X (5)
Liquid Chromatography MS - alternating - reverse phase (5)
Orbitrap Fusion Lumos (4)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (4)
Gas Chromatography MS - positive (4)
LTQ Orbitrap Velos (3)
Liquid Chromatography MS - positive (3)
Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
TripleTOF 6600 (2)
Q Exactive Plus (2)
Direct infusion MS - negative (2)
Illumina iScan system (1)
QIAsymphony SP (1)
Illumina HiSeq 1000 (1)
BGISEQ-500 (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
Orbitrap Exploris 480 (1)
Instrument (1)
Exactive Plus (1)
LTQ Orbitrap (1)
Orbitrap Eclipse (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Q Exactive (1)

Publication Date

2022 (121)
2023 (87)
2025 (85)
2021 (80)
2024 (61)
2020 (45)
2019 (44)
2014 (42)
2013 (39)
2026 (37)
2015 (37)
2016 (33)
2012 (26)
2018 (22)
2010 (18)
2017 (17)
2011 (13)
2009 (5)
2008 (4)
2007 (3)
2005 (2)
2006 (1)

UNIPROT ID/AC

128UP_DROME (1)
140U_DROME (1)
14331_SOLTU (1)
14332_SOLTU (1)
14335_SOLTU (1)
1433E_DROME (1)
1433Z_DROME (1)
18C_DROME (1)
2AAA_DROME (1)
2ABA_DROME (1)
3HIDH_DROME (1)
4113.PGSC0003DMT400001418 (1)
4113.PGSC0003DMT400002078 (1)
4113.PGSC0003DMT400003947 (1)
4113.PGSC0003DMT400005135 (1)
4113.PGSC0003DMT400005136 (1)
4113.PGSC0003DMT400005427 (1)
4113.PGSC0003DMT400009647 (1)
4113.PGSC0003DMT400009751 (1)
4113.PGSC0003DMT400013958 (1)
4113.PGSC0003DMT400015957 (1)
4113.PGSC0003DMT400016201 (1)
4113.PGSC0003DMT400022438 (1)
4113.PGSC0003DMT400027147 (1)
4113.PGSC0003DMT400027379 (1)
4113.PGSC0003DMT400029003 (1)
4113.PGSC0003DMT400031900 (1)
4113.PGSC0003DMT400034164 (1)
4113.PGSC0003DMT400034190 (1)
4113.PGSC0003DMT400035006 (1)

ENSEMBL ID

ENSG00000170477 (5)
ENSG00000247315 (5)
ENSG00000147251 (4)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16704 (31)
CHEBI:17368 (31)
CHEBI:17568 (28)
CHEBI:17596 (28)
CHEBI:16708 (27)
CHEBI:16919 (27)
CHEBI:30769 (27)
CHEBI:16750 (26)
CHEBI:15891 (26)
CHEBI:17154 (25)
CHEBI:7916 (25)
CHEBI:16027 (25)
CHEBI:15354 (24)
CHEBI:17895 (24)
CHEBI:17295 (23)
CHEBI:17351 (23)
CHEBI:6650 (22)
CHEBI:16335 (22)
CHEBI:17509 (22)
CHEBI:55328 (22)
CHEBI:28716 (22)
CHEBI:15756 (22)
CHEBI:16235 (21)
CHEBI:16015 (21)
CHEBI:30915 (21)
CHEBI:27897 (21)
CHEBI:28865 (21)
CHEBI:16040 (20)
CHEBI:16811 (20)
CHEBI:16865 (20)

Metabolite Name

Uracil (21)
Uridine (21)
Creatine (21)
Hypoxanthine (21)
Taurine (20)
Inosine (19)
Adenosine (18)
L-Histidine (16)
Guanine (16)
Adenine (16)
Xanthine (15)
Guanosine (15)
Creatinine (15)
L-Tyrosine (15)
Choline (14)
Taurocholic acid (14)
Cytosine (14)
L-Phenylalanine (14)
L-Arginine (13)
Indole (13)
Arachidonic acid (13)
L-Tryptophan (13)
Azelaic acid (13)
L-Valine (13)
Betaine (12)
4-Pyridoxic acid (12)
Kynurenic acid (12)
Pantothenic acid (12)
Riboflavin (12)
Thymidine (12)

First Public Date

2022 (1)
2018 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Affiliated Eye Hospital of Shandong University of Traditional Chinese Medicine (5)
BMI, Faculty of Medicine, University of Ottawa, Canada (4)
Northwest University (4)
University of Ottawa (4)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (3)
Experimental Radiation Oncology, MD Anderson Cancer Center, Houston, TX, USA (3)
Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, Collaborative Innovation Center of Hematology, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200000, China (3)
Soochow University (3)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (3)
Beijing proteome research center (2)
Central South University (2)
College of Horticulture, Northwest A&F University (2)
Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China. (2)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (2)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (2)
Department of Chemistry, The University of Hong Kong (2)
Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China (2)
Institute of Genetics & Developmental Biology, Chinese Academy of Sciences (2)
Regulatory research division, Health Canada (2)
SJTU (2)
School of Life Sciences, Westlake University, Hangzhou, Zhejiang, China (2)
Shanghai Center for Systems Biomedicine Shanghai Jiao Tong University (2)
State Key Lab of Reproductive Medicine, Nanjing Medical University (2)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University (2)
State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, China (2)
Xiamen University (2)
Zhejiang University (2)
westlake.edu.cn (2)
1 Department of Emergency, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine (1)
1)Chongqing Medical University;2) Chongqing Key Laboratory of Translational Research for Cancer Metastasis and Individualized Treatment, Chongqing University Cancer Hospital (1)

IsPrivate

False (1)

Modification

57.021464 (5)
15.994915 (4)
71.037114 (3)

Study type

Transcription profiling by array (65)
RNA-seq of coding RNA (60)
ChIP-seq (24)
Methylation profiling by high throughput sequencing (14)
ChIP-chip by tiling array (13)
Comparative genomic hybridization by array (7)
RNA-seq of non coding RNA (6)
Unknown experiment type (3)
Other (3)
Transcription profiling by RT-PCR (2)
RNA-seq of total RNA (2)
Transcription profiling by tiling array (1)
Genotyping by array (1)
Methylation profiling by array (1)
Genotyping by high throughput sequencing (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (5217)
2022 (4475)
2024 (4094)
2023 (4013)
2021 (3320)
2020 (2380)
2019 (1598)
2018 (1351)
2017 (1140)
2016 (891)
2026 (772)
2015 (710)
2014 (528)
2013 (310)
2012 (241)
2011 (139)
2010 (102)
2009 (61)
2008 (41)
2007 (17)
2006 (15)
2005 (14)
2004 (8)
2002 (4)
2003 (2)
2001 (2)
1999 (1)

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Recent insights into farnesoid X receptor in non-alcoholic fatty liver disease.

Not available

S-EPMC4188900 | biostudies-literature

Expression data from testes and abdomen in fertile and sterile introgression males

Postmating reproductive isolation is often manifested as hybrid male sterility, for which X-linked genes are over-represented. In contrast, X-linked gene are significantly under-represented among testis-expressing gene.This seeming contradiction may be germane to the X:autosome imbalance hypothesis ...

ORGANISM(S): Drosophila simulans

2010-05-19 | E-GEOD-21734 | biostudies-arrayexpress

Four new species of the trapdoor spider genus Conothele Thorell, 1878 from Mainland China and Laos (Araneae, Ctenizidae).

Not available

S-EPMC5242267 | biostudies-literature

Xiao-Xu-Ming decoction extract regulates differentially expressed proteins in the hippocampus after chronic cerebral hypoperfusion.

Not available

S-EPMC6334616 | biostudies-literature

Rhombohedral Li1+xYxZr2-x(PO4)3 Solid Electrolyte Prepared by Hot-Pressing for All-Solid-State Li-Metal Batteries.

Not available

S-EPMC7178664 | biostudies-literature

Transcriptomics and metabolomics of engineered Synechococcus elongatus during photomixotrophic growth

BACKGROUND: Converting carbon dioxide (CO2) into value-added chemicals using engineered cyanobacteria is a promising strategy to tackle the global warming and energy shortage issues. However, most cyanobacteria are autotrophic and use CO2 as a sole carbon source, which makes it h...

2022-03-21 | MTBLS2825 | MetaboLights

The subfamily Xerocomoideae (Boletaceae, Boletales) in China.

Not available

S-EPMC10825750 | biostudies-literature

Stabilizing the oxygen anionic redox chemistry using a Li-deficient and Li-rich biphasic structure for high-energy Li-ion batteries.

Not available

S-EPMC12512871 | biostudies-literature

Notes on two species of Massuria Thorell, 1887 (Arachnida, Araneae, Thomisidae) from China with description of a new species.

Not available

S-EPMC10457674 | biostudies-literature

Trapdoor spiders of the genus Cyclocosmia Ausserer, 1871 from China and Vietnam (Araneae, Ctenizidae).

Not available