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TranscriptomicsSalt/NaCl stress in Desulfovibrio vulgaris Hildenborough
This set of microarray data was used to investigate the effects of D. vulgaris adaptation to excess NaCl. Keywords: stress response, one time point (the mid-log phase for both control and treated cells) Comparison of cells treated with 250 Salt:NaCl to untreated cells at times of mid-log phase min.
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2010-04-11 | E-GEOD-14343 | biostudies-arrayexpress
TranscriptomicsCell wide response to low oxygen exposure in Desulfovibrio vulgaris Hildenborough
We investigated the effects of low level oxygen on Desulfovibrio vulgaris Hildenborough using microarrays. Keywords: time course, stress response Comparison of cells treated with 1000 ppm oxygen to untreated cells at 60,120,240 min.
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2010-06-10 | E-GEOD-7816 | biostudies-arrayexpress
TranscriptomicsCell wide response to air exposure in Desulfovibrio vulgaris Hildenborough
We investigated the effects of air exposure on Desulfovibrio vulgaris Hildenborough using microarrays. Keywords: stress response, time course Comparison of cells treated with air to untreated cells at 0,10,30,120,240 min.
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2007-08-08 | E-GEOD-8196 | biostudies-arrayexpress
TranscriptomicspH stress in Desulfovibrio vulgaris Hildenborough
Using data from microarray experiments, we investigated the effects of excess NaCl on D. vulgaris. Keywords: stress response, time course Comparison of cells treated with pH10 pH to untreated cells at times of 0,120,240,30,60 min.
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2007-08-31 | E-GEOD-8197 | biostudies-arrayexpress
TranscriptomicsEffect of carbon monoxide and the CO sensor CooA on gene expression in Desulfovibrio vulgaris Hildenborough
Investigating the role of carbon monoxide and a CO sensor protein CooA in the physiology of Desulfovibrio vulgaris Hildenborough using whole genome expression analysis Comparison of whole genome expression changes in the wild type and a strain deleted for CooA (DVU2097) in the presence and absence o...
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2012-07-30 | E-GEOD-36770 | biostudies-arrayexpress
TranscriptomicsDifferent Mutants in Desulfovibrio vulgaris Hildenborough
Using gene expression changes at mid-log phase data from microarray experiments, we investigated the roles of global transcription regulators in D. vulgaris. Comparison of cells treated with DVU2097, DVU3111, DVU0379, DVU2547 Mutant to untreated Wildtype cells at times of 0 min
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2011-11-01 | E-GEOD-29380 | biostudies-arrayexpress
TranscriptomicsCoculture of Desulfovibrio vulgaris Hildenborough and Methanococcus maripaludis
Using data from microarray experiments we investigated a coculture of D. vulgaris Hildenborough and Methanococcus maripaludis. Using data from microarray experiments we investigated a coculture of D. vulgaris Hildenborough and Methanococcus maripaludis.
ORGANISM(S): Methanococcus maripaludis S2 
2011-11-01 | E-GEOD-30831 | biostudies-arrayexpress
TranscriptomicsHydrogen peroxide Stress in Desulfovibrio vulgaris Hildenborough (REPLACED BY GSE21441)
Using data from microarray experiments, we investigated the effects of excess hydrogen peroxide on D. vulgaris. Keywords: stress response, time course Comparison of wild type and deletion mutant cells treated with 1 mM H2O2 to untreated cells at times of 0 and 120 min. See also Series GSE4447 (http...
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2011-10-03 | E-GEOD-14345 | biostudies-arrayexpress
TranscriptomicsHydrogen peroxide Stress in Desulfovibrio vulgaris Hildenborough (REPLACED BY GSE21438)
Using data from microarray experiments, we investigated the effects of excess hydrogen peroxide on D. vulgaris. Keywords: stress response, time course Comparison of wild type and deletion mutant cells treated with 1 mM H2O2 to untreated cells at times of 0 and 120 min. See also Series GSE4447 (http...
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2011-10-03 | E-GEOD-14355 | biostudies-arrayexpress
TranscriptomicsTranscriptomic analysis of mature Desulfovibrio vulgaris biofilm
Background. Desulfovibrio vulgaris Hildenborough is a sulfate-reducing bacterium (SRB) that is intensively studied in the context of metal corrosion and heavy-metal bioremediation, and SRB populations are commonly observed in pipe and subsurface environments as surface-associated populations. In o...
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2012-03-31 | E-GEOD-35883 | biostudies-arrayexpress
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