Liang Zhou Z - OmicsDI

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Unknown (2895)
Proteomics (91)
Transcriptomics (62)
Genomics (25)
Metabolomics (21)
Multiomics (3)

Organisms

Homo sapiens (84)
Mus musculus (29)
Caenorhabditis elegans (15)
Drosophila melanogaster (5)
Arabidopsis thaliana (5)
Zea mays (4)
Oryza sativa (3)
Oryza sativa Japonica Group (2)
Gallus gallus (2)
Grapholita molesta (2)
Rattus norvegicus (2)
Anas platyrhynchos (2)
Macaca mulatta (2)
Acromyrmex echinatior (1)
Brassica oleracea (1)
Arachis hypogaea (1)
soil metagenome (1)
Clonorchis sinensis (1)
Yersinia pestis (1)
Danio rerio (1)
Bos taurus (1)
Enterococcus faecalis OG1RF (1)
Saccharomyces cerevisiae (1)
Staphylococcus aureus (1)
Bombyx mori (1)
Pseudomonas aeruginosa PAO579 (1)
Streptococcus suis SC149 (1)

Repository

biostudies-arrayexpress (85)
pride (57)
iProX (28)
MetaboLights (21)
PeptideAtlas (3)
EGA (2)
jPOST (1)
MassIVE (1)
PAXDB (1)

Tissue

Cell culture (12)
Liver (6)
Blood cell (4)
Others (3)
Embryonic stem cell (3)
Blood (2)
Brain (2)
Colon (2)
HEK-293T cell (2)
Hepatocyte (2)
Kidney (2)
Lung (2)
Skin (2)
Stem cell (2)
A549-CR cell (1)
Adipose tissue (1)
Blood plasma (1)
Bone marrow (1)
Cell suspension culture (1)
Early embryonic cell (1)
Electrically active cell (1)
Embryo (1)
Epithelial cell (1)
Epithelial cell of lung (1)
Gastric cancer cell line (1)
Gastric epithelium (1)
HCT-116 cell (1)
Heart (1)
Intestinal mucosa (1)
Keratinocyte (1)

Disease

Acute leukemia (3)
Disease free (2)
Non-small cell lung carcinoma (2)
Brain glioblastoma multiforme (1)
Colon cancer (1)
Gastric adenocarcinoma (1)
Gastric signet ring cell adenocarcinoma (1)
Hepatocellular carcinoma (1)
Severe acute respiratory syndrome (1)
Thyroid cancer (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (57)
Shotgun proteomics (26)
Mass spectrometry (17)
Affinity purification coupled with mass spectrometry proteomics (6)
Data-dependent acquisition (6)
Mass spectrometry assay (4)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
Top-down proteomics (4)
Bottom-up proteomics (3)
Data-independent acquisition (3)
Gel-based experiment (3)
SRM/MRM (2)
SWATH MS (2)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (11)
Liquid Chromatography MS - positive - reverse phase (11)
Liquid Chromatography MS - positive - hilic (4)
Liquid Chromatography MS - negative - hilic (3)
Illumina NovaSeq 6000 (2)
LTQ Orbitrap Elite (2)
Illumina HiSeq 1000 (1)
Q Exactive HF (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS – negative - reverse phase (1)
TripleTOF 5600 (AB Sciex) (1)
QExactive (1)

Publication Date

2011 (21)
2022 (19)
2025 (17)
2026 (16)
2024 (16)
2013 (15)
2023 (15)
2015 (14)
2021 (13)
2014 (13)
2010 (7)
2020 (7)
2016 (5)
2008 (5)
2012 (3)
2009 (3)
2017 (3)
2019 (3)
2018 (2)

UNIPROT ID/AC

3BHS1_MACMU (1)
9544.ENSMMUP00000000029 (1)
9544.ENSMMUP00000000072 (1)
9544.ENSMMUP00000000075 (1)
9544.ENSMMUP00000000192 (1)
9544.ENSMMUP00000000231 (1)
9544.ENSMMUP00000000270 (1)
9544.ENSMMUP00000000273 (1)
9544.ENSMMUP00000000300 (1)
9544.ENSMMUP00000000331 (1)
9544.ENSMMUP00000000335 (1)
9544.ENSMMUP00000000399 (1)
9544.ENSMMUP00000000400 (1)
9544.ENSMMUP00000000529 (1)
9544.ENSMMUP00000000584 (1)
9544.ENSMMUP00000000645 (1)
9544.ENSMMUP00000000701 (1)
9544.ENSMMUP00000000740 (1)
9544.ENSMMUP00000000788 (1)
9544.ENSMMUP00000000800 (1)
9544.ENSMMUP00000000801 (1)
9544.ENSMMUP00000000832 (1)
9544.ENSMMUP00000000870 (1)
9544.ENSMMUP00000000898 (1)
9544.ENSMMUP00000000905 (1)
9544.ENSMMUP00000000981 (1)
9544.ENSMMUP00000001028 (1)
9544.ENSMMUP00000001049 (1)
9544.ENSMMUP00000001078 (1)
9544.ENSMMUP00000001171 (1)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:17154 (8)
CHEBI:18257 (8)
CHEBI:15354 (7)
CHEBI:16196 (7)
CHEBI:16335 (7)
CHEBI:16704 (7)
CHEBI:16737 (7)
CHEBI:17368 (7)
CHEBI:17568 (7)
CHEBI:15756 (6)
CHEBI:15882 (6)
CHEBI:15891 (6)
CHEBI:15956 (6)
CHEBI:16235 (6)
CHEBI:16359 (6)
CHEBI:16450 (6)
CHEBI:16708 (6)
CHEBI:16750 (6)
CHEBI:17509 (6)
CHEBI:17596 (6)
CHEBI:17748 (6)
CHEBI:30915 (6)
CHEBI:35581 (6)
CHEBI:15367 (5)
CHEBI:16027 (5)
CHEBI:16411 (5)
CHEBI:16755 (5)
CHEBI:16828 (5)
CHEBI:16919 (5)
CHEBI:16962 (5)

Metabolite Name

Creatinine (6)
Hypoxanthine (6)
Indole (6)
Oleic acid (6)
Uracil (6)
Adenine (5)
Adenosine (5)
Guanosine (5)
Inosine (5)
Ornithine (5)
Taurine (5)
Uric acid (5)
Arachidonic acid (4)
Benzaldehyde (4)
Benzyl alcohol (4)
Biotin (4)
Butyric acid (4)
Cortisone (4)
Creatine (4)
Cytidine (4)
Deoxyuridine (4)
Dihydrothymine (4)
Guanine (4)
L-Valine (4)
Niacinamide (4)
Palmitic acid (4)
Phenol (4)
Pipecolic acid (4)
Quercetin (4)
Sinapine (4)

Study type

Transcription profiling by array (27)
ChIP-seq (22)
RNA-seq of coding RNA (15)
Unknown experiment type (5)
RNA-seq of non coding RNA (4)
Other (3)
Methylation profiling by array (3)
ChIP-chip by tiling array (1)
Spatial transcriptomics by high-throughput sequencing (1)
Comparative genomic hybridization by array (1)
Single nucleus RNA sequencing (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2025 (519)
2022 (399)
2024 (397)
2023 (353)
2021 (294)
2020 (232)
2018 (139)
2019 (123)
2016 (91)
2026 (88)
2017 (77)
2015 (74)
2014 (55)
2013 (43)
2011 (32)
2012 (21)
2010 (17)
2009 (9)
2008 (8)
2005 (4)
2004 (2)
2007 (1)
2003 (1)
2001 (1)

Lab affiliation

Department of pathophysiology, School of Basic Medical Sciences, Wuhan University, Wuhan 430071, China (3)
1Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China. (2)
Clinical Laboratory of BGI Health, BGI-Shenzhen, Shenzhen 518083, China (2)
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Institute of Animal Sciences, Chinese Academy of Agricultural Sciences (2)
Peking University (2)
The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China (2)
University of Science and Technology of China (2)
1.Department of Colorectal Surgery, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. 2.Guangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. (1)
Analytical Research Center for Organic and Biological Molecules, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zu Chong Zhi Road, Shanghai 201203, China (1)
Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China (1)
College of Animal Sciences, Zhejiang University, Hangzhou, China (1)
College of Life Science and Technology, Jinan University, Guangzhou 510632, China; (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China (1)
Department of Burns and Reconstructive Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, P.R. China. (1)
Department of Dermatology, Xinhua Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China (1)
Department of Immunobiology, College of Life Science and Technology, Jinan University, Guangzhou, China. (1)
Department of Molecular and Cellular Oncology, The University of Texas MD Anderson Cancer Center (1)
Department of Occupational Health and Occupational Medicine, Guangdong Provincial Key Laboratory of Tropical Disease Research, School of Public Health, Southern Medical University, Guangzhou, China (1)
Department of Pathology, Institute of Systems Biomedicine, School of Basic Medical Sciences, Beijing Key Laboratory of Tumor Systems Biology, Peking University Health Science Center, Beijing, China (1)
Department of Pharmacology and Moores Cancer Center, University of California, San Diego, USA (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Faculty of Life and Health Sciences, Shenzhen University of Advanced Technology (1)
Guangdong Provincial Key Laboratory of Tropical Disease Research, School of Public Health, Southern Medical University, Guangzhou, China (1)
Hunan Normal University (1)
Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical School (1)
Key Lab of Integrated Crop Pest Management of Shandong, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China (1)
Key Laboratory of Aging and Cancer Biology of Zhejiang Province, School of Basic Medical Sciences, Hangzhou Normal University, Hangzhou, 311121, China (1)
Key Laboratory of Ministry of Education for Genetic Improvement and Comprehensive Utilization of Crops, Fujian Provincial Key Laboratory of Crop Breeding by Design, College of Agriculture, Fujian Agriculture and Forestry University (1)

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Pyruvate fermentation vs Lactate-Sulfate

In order to obtain a global view of energy metabolism pathways of the sulfate-reducer Desulfovibrio vulgaris Hildenborough and the proteins involved therein whole-genome microarrays were used to compare the transcriptional response of cells grown with hydrogen/sulfate, pyruvate/sulfate, lactate/thio...

ORGANISM(S): Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

2008-05-31 | E-GEOD-8015 | biostudies-arrayexpress

Hydrogen peroxide Stress in Desulfovibrio vulgaris Hildenborough (REPLACED BY GSE21441)

Using data from microarray experiments, we investigated the effects of excess hydrogen peroxide on D. vulgaris. Keywords: stress response, time course Comparison of wild type and deletion mutant cells treated with 1 mM H2O2 to untreated cells at times of 0 and 120 min. See also Series GSE4447 (http...

ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough

2011-10-03 | E-GEOD-14345 | biostudies-arrayexpress

Hydrogen peroxide Stress in Desulfovibrio vulgaris Hildenborough (REPLACED BY GSE21438)

ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough

2011-10-03 | E-GEOD-14355 | biostudies-arrayexpress

Pyruvate vs Lactate as electron donor in Sulfate reduction

ORGANISM(S): Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

2008-05-31 | E-GEOD-8071 | biostudies-arrayexpress

Thiosulfate vs Sulfate as electron acceptor in Sulfate reduction

ORGANISM(S): Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

2008-05-31 | E-GEOD-8072 | biostudies-arrayexpress

Hydrogen vs Lactate as electron donor in Sulfate reduction

ORGANISM(S): Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

2008-05-31 | E-GEOD-8037 | biostudies-arrayexpress

Microarray skeletal muscle miR-499 overexpressing mice

This experiment was conducted to identify target genes of the microRNA-499 in skeletal muscle of transgenic mice that overexpressed miR-499. The following abstract from the submitted manuscript describes the major findings of this work. Coupling of mitochondrial function and skeletal muscle f...

ORGANISM(S): Mus musculus

2016-09-03 | E-GEOD-72581 | biostudies-arrayexpress

Energy metabolism pathways of the sulfate-reducer Desulfovibrio vulgaris Hildenborough

This SuperSeries is composed of the following subset Series: GSE8015: Pyruvate fermentation vs Lactate-Sulfate GSE8037: Hydrogen vs Lactate as electron donor in Sulfate reduction GSE8071: Pyruvate vs Lactate as electron donor in Sulfate reduction GSE8072: Thiosulfate vs Sulfate as electron acceptor ...

ORGANISM(S): Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

2008-04-05 | E-GEOD-8069 | biostudies-arrayexpress

Determination of Phenolic Acids Using Ultra-High-Performance Liquid Chromatography Coupled with Triple Quadrupole (UHPLC-QqQ) in Fruiting Bodies of Sanghuangporus baumii (Pilat) L.W. Zhou and Y.C. Dai.

Not available

S-EPMC10609702 | biostudies-literature

Liang-Ge-San: a classic traditional Chinese medicine formula, attenuates acute inflammation via targeting GSK3β.

Not available

S-EPMC10338930 | biostudies-literature