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TranscriptomicsIdentification of isobutanol response network of E. coli
Isobutanol has emerged as a potential biofuel due to recent metabolic engineering efforts. Here we used gene expression and transcription factor(TF)-gene interaction data, genetic knockouts, and Network Component Analysis (NCA) to map the isobutanol response network of Escherichia coli under aerobic...
ORGANISM(S): Escherichia coli 
2009-10-31 | E-GEOD-13444 | biostudies-arrayexpress
UnknownQuantifying the Impact of Hydrological Connectivity on Salt Marsh Vegetation in the Liao River Delta Wetland.
Not available
S-EPMC10154185 | biostudies-literature
UnknownIsolation, characterization, and biomedical potential of phycoerythrin phycobiliprotein from Kappaphycus alvarezii (Doty) L. M. Liao: antimicrobial, antioxidant, and anticancer activities.
Not available
S-EPMC12314021 | biostudies-literature
TranscriptomicsCyanide response in Escherichia coli
The goal was to ascertain the impact of cyanide treatment on E. coli's transcriptome. There were 4 biological samples. For each sample there were two replicate DNA microarray performed. Data was analyzed with Imagene and lcDNA Hyduke DR, Rohlin L, Kao KC, Liao JC. 2003 A software package for cDNA ...
ORGANISM(S): Escherichia coli 
2014-07-31 | E-GEOD-23578 | biostudies-arrayexpress
GenomicsPriming for Th2 differentiation requires IL-2-mediated induction of IL-4 receptor alpha chain expression
Th2 cells enable humoral immunity and host-defense to parasites. Whereas IL-4 drives Th2 differentiation and IL-2 is important later in this process by augmenting IL4 chromatin accessibility, we demonstrate that IL-2 serves an essential early role in regulating IL-4R? expression by inducing binding ...
ORGANISM(S): Mus musculus 
2008-12-11 | E-GEOD-12346 | biostudies-arrayexpress
UnknownFuture climate change impacts on carbon dynamics and ecohydrological risks in the West Liao river Basin, China: implications for carbon management.
Not available
S-EPMC12781923 | biostudies-literature
TranscriptomicsGenome-wide binding and mechanistic analyses of Smchd1 mediated epigenetic regulation [RNA-Seq]
Purpose: The aim of this study is to identify genes that are under the transcriptional control of the epigenetic regulator Smchd1 in neural stem cells (NSCs) derived from E14.5 mouse brain Methods: Total RNA was extracted using an AllPrep DNA/RNA Mini Kit (Qiagen) from cultured neural stem cells der...
ORGANISM(S): Mus musculus 
2015-06-11 | E-GEOD-65747 | biostudies-arrayexpress
UnknownA new species and a replacement name in Cynanchum (Apocynaceae, Asclepiadeae) from China.
Not available
S-EPMC11019257 | biostudies-literature
TranscriptomicsXanthomonas campestris pv. Campestris 8004 far-red light irradiation and XccBphP overexpression transcriptional analysis
RNA isolation and RNA-Seq: Wild-type Xcc or pXccBphP strains were cultured in far-red light or dark conditions up to logarithmic phase (0.7 to 0.8 OD600) at 28C in PYM broth. Total bacterial RNA was isolated using the MasterPureTM RNA Purification Kit (Epicentre, Illumina). Samples corresponding to ...
ORGANISM(S): Xanthomonas campestris pv. campestris 
2016-12-03 | E-MTAB-4958 | biostudies-arrayexpress
UnknownGenetic Evidence of SpGH9A3 in Leaf Morphology Variation of Spathiphyllum 'Mojo'.
Not available
S-EPMC11431335 | biostudies-literature
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