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TranscriptomicsThe photoreceptor chaperone FHY1 has an independent role in gene modulation and plant development under far-red light
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ORGANISM(S): Arabidopsis thaliana 
2014-08-04 | E-GEOD-58084 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis dark-grown phyAphyB seedlings expressing the Y276H mutant of phyB (YHB) reveals a light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
Dominant gain-of-function alleles of Arabidopsis phytochrome B were recently shown to confer light-independent, constitutive photomorphogenic (cop) phenotypes to transgenic plants (Su & Lagarias 2007 Plant Cell 19, 2124-2139). In the present study, comparative transcript profiling experiments were p...
ORGANISM(S): Arabidopsis thaliana 
2008-11-15 | E-GEOD-8951 | biostudies-arrayexpress
TranscriptomicsThe photoreceptor chaperone FHY1 has an independent role in gene modulation and plant development under far-red light [RNA-Seq]
To incorporate the far-red light (FR) signal into a strategy for optimizing plant growth, FAR-RED ELONGATED HYPOCOTYL1 (FHY1) mediates the nuclear translocation of the FR photoreceptor phytochrome A (phyA) and facilitates the association of phyA with the promoters of numerous associated genes crucia...
ORGANISM(S): Arabidopsis thaliana 
2014-08-04 | E-GEOD-58082 | biostudies-arrayexpress
GenomicsThe photoreceptor chaperone FHY1 has an independent role in gene modulation and plant development under far-red light [ChIP-seq]
To incorporate the far-red light (FR) signal into a strategy for optimizing plant growth, FAR-RED ELONGATED HYPOCOTYL1 (FHY1) mediates the nuclear translocation of the FR photoreceptor phytochrome A (phyA) and facilitates the association of phyA with the promoters of numerous associated genes crucia...
ORGANISM(S): Arabidopsis thaliana 
2014-08-04 | E-GEOD-58083 | biostudies-arrayexpress
GenomicsEthylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway.
Ethylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway.
PRJNA429126 | ENA
TranscriptomicsA light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
Dominant gain-of-function alleles of Arabidopsis phytochrome B were recently shown to confer light-independent, constitutive photomorphogenic (cop) phenotypes to transgenic plants (Su & Lagarias 2007 Plant Cell 19, 2124-2139). In the present study, comparative transcript profiling experiments were p...
ORGANISM(S): Arabidopsis thaliana 
2008-11-10 | GSE8951 | GEO
GenomicsPACAP Induces Light Aversion in Mice by an Inheritable Mechanism Independent of CGRP
PACAP Induces Light Aversion in Mice by an Inheritable Mechanism Independent of CGRP
PRJNA730526 | ENA
TranscriptomicsEthylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway.
The transition of skotomorphogenesis to photomorphogenesis is induced by the perception of light and is characterized by the inhibition of hypocotyl elongation and opening of cotyledons. Although it is known that the plant hormone cytokinin, when applied in high concentrations, inhibits hypocotyl el...
ORGANISM(S): Arabidopsis thaliana 
2018-10-01 | GSE108912 | GEO
TranscriptomicsDiverse pathways generate microRNA-like RNAs and Dicer-independent small interfering RNAs in fungi
A variety of small RNAs, including the Dicer-dependent miRNAs and the Dicer-independent Piwi-interacting RNAs, associate with Argonaute family proteins to regulate gene expression in diverse cellular processes. These two species of small RNA have not been found in fungi. Here, by analyzing small RN...
ORGANISM(S): Neurospora crassa 
2010-07-01 | E-GEOD-21175 | biostudies-arrayexpress
GenomicsArabidopsis thaliana
A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
PRJNA102383 | ENA
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