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Proteomics
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Homo sapiens
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Rattus norvegicus
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pride
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Mass Spectrometry
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Shotgun proteomics
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2022
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2023
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Telethon Institute of Genetics and Medicine (TIGEM), Pozzuoli, Italy Department of Clinical Medicine and Surgery, Federico II University, Naples, Italy
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Improving Small-Molecule Force Field Parameters in Ligand Binding Studies.
Not available
S-EPMC8711133
|
biostudies-literature
Cite
Perspectives on Ligand/Protein Binding Kinetics Simulations: Force Fields, Machine Learning, Sampling, and User-Friendliness.
Not available
S-EPMC10536999
|
biostudies-literature
Cite
Energetics and structural characterization of the large-scale functional motion of adenylate kinase.
Not available
S-EPMC4325324
|
biostudies-literature
Cite
Conformational Changes in the Epidermal Growth Factor Receptor: Role of the Transmembrane Domain Investigated by Coarse-Grained MetaDynamics Free Energy Calculations.
Not available
S-EPMC5010359
|
biostudies-literature
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Drug Repurposing on G Protein-Coupled Receptors Using a Computational Profiling Approach.
Not available
S-EPMC8138314
|
biostudies-literature
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Transferring chemical and energetic knowledge between molecular systems with machine learning.
Not available
S-EPMC9839695
|
biostudies-literature
Cite
Kinetics of protein-ligand unbinding: Predicting pathways, rates, and rate-limiting steps.
Not available
S-EPMC4321287
|
biostudies-literature
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Minute-timescale free-energy calculations reveal a pseudo-active state in the adenosine A<sub>2A</sub> receptor activation mechanism.
Not available
S-EPMC11965979
|
biostudies-literature
Cite
Conformational plasticity and allosteric communication networks explain Shelterin protein TPP1 binding to human telomerase.
Not available
S-EPMC10630336
|
biostudies-literature
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DDT - Drug Discovery Tool: a fast and intuitive graphics user interface for docking and molecular dynamics analysis.
Not available
S-EPMC9887484
|
biostudies-literature
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