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ProteomicsMudPIT analyses of the proteins co-purified with the Interactor of Little Elongation Complex ELL subunit 1 (FLAG-ICE1), WT MED26, and D2G8 NTD-mutant MED26, affinity-purified from HEK293T cell lines
Protein Complexes Purification: We generated 293FRT cell lines that stably express FLAG-tagged ICE1 (Interactor of Little Elongation Complex ELL subunit 1; KIAA0947). We extracted nuclear proteins in the presence of Benzonase to digest nucleic acids, including both DNA and RNA, and purified the lit...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-02-20 | MSV000083465 | MassIVE
ProteomicsFecal butyrate and deoxycholic acid quantitation for rapid assessment of the gut microbiome
Datasets to accompany the manuscript "Fecal butyrate and deoxycholic acid quantitation for rapid assessment of the gut microbiome" Michael W. Mullowney, Angelica Moran, Antonio Hernandez, Mary McMillin, Amber R. Rose, David Moran, Jessica Little, Ann B. Nguyen, Bhakti K. Patel, Christopher J. Lehman...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2025-06-17 | MSV000098238 | MassIVE
MetabolomicsGNPS - Fecal butyrate and deoxycholic acid quantitation for rapid assessment of the gut microbiome
Datasets to accompany the manuscript "Fecal butyrate and deoxycholic acid quantitation for rapid assessment of the gut microbiome" Michael W. Mullowney, Angelica Moran, Antonio Hernandez, Mary McMillin, Amber R. Rose, David Moran, Jessica Little, Ann B. Nguyen, Bhakti K. Patel, Christopher J. Lehman...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2025-06-17 | MSV000098238 | GNPS
ProteomicsLarge-Scale Analysis of Breast Cancer-Related Conformational Changes in Proteins using Limited Proteolysis
Conformational changes in proteins can lead to disease. Thus, methods for identifying conformational changes in proteins can further improve our understanding and facilitate detection of disease states. Here we combine limited proteolysis (LiP) with Stable Isotope Labeling with Amino Acids in Cell ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-29 | MSV000080770 | MassIVE
GenomicsCpG islands recruit a histone H3 lysine 36 demethylase [Illumina sequencing data]
Eukaryotic gene expression profiles are largely defined by transcription factors that recognize specific DNA sequences in gene regulatory regions and impact RNA polymerase recruitment and transcription. In addition to specific core promoter regulatory elements, up to 70% of genes in higher eukaryote...
ORGANISM(S): Mus musculus 
2010-04-27 | E-GEOD-18588 | biostudies-arrayexpress
UnknownOccurrence of Chlamydia spp. in Conjunctival Samples of Stray Cats in Timisoara Municipality, Western Romania.
Not available
S-EPMC9693150 | biostudies-literature
TranscriptomicsEarly response of bovine alveolar macrophages to infection with live and heat-killed Mycobacterium bovis
Bovine tuberculosis, caused by Mycobacterium bovis, is a disease of considerable economic importance yet comparatively little is known about the bovine immune response to the disease. Alveolar macrophages are one of the first cells to encounter mycobacteria following infection. In this experiment we...
ORGANISM(S): Bos taurus 
2010-01-30 | E-GEOD-19237 | biostudies-arrayexpress
TranscriptomicsThe Pitx2:miR-200c/141:noggin pathway regulates BMP signaling and ameloblast differentiation
The mouse incisor is a remarkable tooth that grows throughout the animalM-bM-^@M-^Ys lifetime. This continuous renewal is fueled by epithelial stem cells that give rise to ameloblasts, which generate enamel, and little is known about the function of specific miRNAs in this process. Here we describe ...
ORGANISM(S): Mus musculus 
2013-07-09 | E-GEOD-48583 | biostudies-arrayexpress
UnknownDevelopment of calibrated viral load standards for group M subtypes of human immunodeficiency virus type 1 and performance of an improved AMPLICOR HIV-1 MONITOR test with isolates of diverse subtypes.
Not available
S-EPMC85282 | biostudies-literature
TranscriptomicsPlant root transcriptome profiling of Azospirillum-rice cooperation
Cooperation involving Plant Growth-Promoting Rhizobacteria results in improvements of plant growth and health. While pathogenic and symbiotic interactions are known to induce transcriptional changes for genes related to plant defense and development, little is known about the impact of phytostimulat...
ORGANISM(S): Oryza sativa Japonica Group 
2014-12-22 | E-GEOD-59137 | biostudies-arrayexpress
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