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TranscriptomicsMechanism for Fe(III) Reduction in Pelobacter carbinolicus
Pelobacter carbinolicus is phylogenetically intertwined with the Geobacteraceae, a family of deltaproteobacteria which couple oxidation of organic compounds to Fe(III) reduction. Whereas Geobacter species completely oxidize organic compounds to CO2, Pelobacter species either ferment or oxidize shor...
ORGANISM(S): Pelobacter carbinolicus 
2008-05-21 | E-GEOD-8338 | biostudies-arrayexpress
TranscriptomicsEpigenetic regulation of reactivation of the silenced X-chromosome during mouse germline development
X chromosome reactivation (XCR) occurs over a prolonged period during genome-wide reprogramming in female germ cells, initiating soon after primordial germ cell specification. The kinetics of XCRs remain poorly understood, as previous studies of XCR were based on a few genes. For a global appraisal ...
ORGANISM(S): Mus musculus 
2024-12-11 | E-MTAB-13576 | biostudies-arrayexpress
TranscriptomicsEither Kras activation or Pten loss similarly enhance the dominant-stable CTNNB1-induced genetic program to promote granulosa cell tumor development in ovary and testis
Stable activation of the WNT signaling effector beta-catenin (CTNNB1(ex3) in ovarian granulosa cells results in the formation of premalignant lesions that develop into granulosa cell tumors (GCTs) spontaneously later in life. Loss of the tumor suppressor gene Pten accelerates GCT formation in the CT...
ORGANISM(S): Mus musculus 
2011-09-19 | E-GEOD-27656 | biostudies-arrayexpress
TranscriptomicsSpalax galili and Spalax carmeli Placenta Transcriptomes
Placenta transcriptome from two species of Spalax. Associated with the article "Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax." Transcriptome or Gene expression
ORGANISM(S): Spalax carmeli 
2015-05-12 | E-GEOD-68763 | biostudies-arrayexpress
TranscriptomicsAdaptation of Geobacter sulfurreducens to Overcome the Loss of a Key Periplasmic c-Type Cytochrome
ppcA is a member of a family of small, periplamic c-type cytochromes in Geobact sulfurreducens. The ppcA mutant displays displays a growth defect on ferric citrate medium, but the mutant has been adapted to grow to near wild-type levels on ferric citrate. The aim of this study was to elucidate gen...
ORGANISM(S): Geobacter sulfurreducens 
2010-07-21 | E-GEOD-7356 | biostudies-arrayexpress
Transcriptomics2009 pandemic H1N1 virus causes disease and upregulation of genes related to inflammatory and immune response, cell death, and lipid metabolism in pigs
This study used virological, histological, and global gene expression data to compare the virulence of two 2009 pH1N1 isolates from human (A/California/04/2009) and swine (A/swine/Alberta/25/2009) to that of a 1918-like classical swine influenza virus (A/swine/Iowa/1930) in a pig model of infection....
ORGANISM(S): Sus scrofa 
2012-02-13 | E-GEOD-35738 | biostudies-arrayexpress
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