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TranscriptomicsIdentification of FUS RNA targets in HeLa cells
We identified a landscape of FUS-binding RNA targets in HeLa cells. The majority of the FUS binding sites are in introns of pre-mRNAs and less are in exons and untranslated regions. Significant FUS binding in introns flanking cassette exons, long intron (>100kb) containing transcripts and noncoding...
ORGANISM(S): Homo sapiens 
2013-12-16 | E-GEOD-50178 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of 4-week old Arabidopsis plants grown in soil flooded to the soil surface (root flooding) or completely submerged under 6 cm of water (submergence)
4-week old Arabidopsis plants grown in soil were flooded to the soil surface (root flooding) or completely submerged under 6 cm of water (submergence). Samples are collected at the time specified.
ORGANISM(S): Arabidopsis thaliana 
2013-01-30 | E-TIGR-120 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis to study the effects of hypoxia and differential gene expression on two different genotypes wild type and the transgenic SAG12:ipt (T5)) through the use of a controlled air feed
The aim was to study the effects of hypoxia and differential gene expression on two different genotypes (wildtype (WT) and the transgenic SAG12:ipt (T5)) through the use of a controlled air feed.
ORGANISM(S): Arabidopsis thaliana 
2005-01-01 | E-TIGR-22 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wild type and transgenic SAG12:ipt Arabidopsis plants following hypoxia for different lengths of time
The aim was to study the effects of hypoxia and differential gene expression on two different genotypes (wildtype (WT) and the transgenic SAG12:ipt (T5)) through the use of a controlled air feed.
ORGANISM(S): Arabidopsis thaliana 
2005-01-01 | E-TIGR-21 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis to study the effects of hypoxia and differential gene expression on two different genotypes wild type and the transgenic SAG12:ipt (T5)) through the use of a controlled air feed
The aim was to study the effects of hypoxia and differential gene expression on two different genotypes (wildtype (WT) and the transgenic SAG12:ipt (T5)) through the use of a controlled air feed.
ORGANISM(S): Arabidopsis thaliana 
2005-01-01 | E-TIGR-20 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis to study the effects of hypoxia and differential gene expression on two different genotypes wild type and the transgenic SAG12:ipt (T5)) through the use of a controlled air feed
The aim was to study the effects of hypoxia and differential gene expression on two different genotypes (wildtype (WT) and the transgenic SAG12:ipt (T5)) through the use of a controlled air feed.
ORGANISM(S): Arabidopsis thaliana 
2005-01-01 | E-TIGR-23 | biostudies-arrayexpress
MetabolomicsNeuronal Hyperactivity due to Loss of Inhibitory Tone in APOE4 Mice Lacking Alzheimer’s Disease-like Pathology
Metabolite profiling was performed on metabolites extracted from the entorhinal cortex and primary visual cortex of 14-15 month old APOE3/3, APOE3/4 and APOE4/4 mice. Metabolites were run on a TOF Mass Spectrometer using an ANP column. Initial analysis was done in an untargeted manner, and processin...
2017-09-05 | MTBLS530 | MetaboLights
TranscriptomicsCritical role for the DNA receptor AIM2 in stem-cell proliferation and cancer
Colorectal cancer is a leading cause of cancer-related deaths. Mutations in the innate immune receptor AIM2 are frequently identified in patients with colorectal cancer, but how AIM2 modulates colonic tumorigenesis is unknown. Here, we found that Aim2-deficient mice were hypersusceptible to colonic ...
ORGANISM(S): Mus musculus 
2015-07-15 | E-GEOD-69436 | biostudies-arrayexpress
TranscriptomicsMicro-RNAs expressed in oligometastases inhibit genes involved with adhesion, invasion and motility
Analysis of MDA-MB-231 cells 48 hours after transfection with non-targeting control, micro-RNA mimics or corresponding micro-RNA inhibitor. The hypothesis tested was that micro-RNAs previously identified as expressed in oligometastatic patients' metastases at a higher level than polymetastatic patie...
ORGANISM(S): Homo sapiens 
2015-03-01 | E-GEOD-60766 | biostudies-arrayexpress
UnknownTumor immune microenvironment characterization in clear cell renal cell carcinoma identifies prognostic and immunotherapeutically relevant messenger RNA signatures.
Not available
S-EPMC5114739 | biostudies-literature
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