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TranscriptomicsMicroRNA profiling of human HeLa cells overexpressing p19 H-Ras
MicroRNA miRNA expression profiles for human HeLa cells (Cervical cancer), overexpressing p19 H-Ras, were examined to investigate the miRNA regulation by p19 H-Ras. miRNA microarray analysis identified statistical unique profiles, which could discriminate miRNAs regulated by p19 H-Ras and not regul...
ORGANISM(S): Homo sapiens 
2008-12-12 | E-TABM-494 | biostudies-arrayexpress
ProteomicsH-NS LC-MS/MS of Edwardsiella piscicida
This study aims to investigate lysine acetylation sites on the H-NS protein in Edwardsiella piscicida. The H-NS protein was first purified, then subjected to SDS-PAGE, followed by gel band excision and LC-MS/MS identification.
ORGANISM(S): Edwardsiella tarda EIB202 
2024-05-24 | PXD047152 | Pride
Edwardsiella piscicida H-ns Lc-ms/ms 
TranscriptomicsHeLa cell response to overexpression of wild type and mutated forms of the P19 splice variant of c-H-ras
The c-H-ras proto-oncogene undergoes alternative splicing of the exon termed IDX giving rise to a novel protein of the Ras family, p19 (H-RasIDX). The experiment tests the effect on the transcriptome of overexpressing the wild type and W164A mutated forms of p19. Keywords: genetic modification Thre...
ORGANISM(S): Homo sapiens 
2009-12-29 | E-GEOD-12059 | biostudies-arrayexpress
TranscriptomicsH. seropedicae grown on nitrate (OD 0.8)
H. seropedicae SmR1 was grown on nitrate 10 mM as the only nitrogen source and harvested at an OD600 of 0.8.
ORGANISM(S): Herbaspirillum seropedicae SmR1 
2016-07-01 | E-MTAB-2842 | biostudies-arrayexpress
TranscriptomicsTranscriptomics of Bacillus thuringiensis Strain CT-43.
We investigated the gene expression and metabolic regulatory mechanisms associated with the high-level accumulation of ICPs by performing the transcriptomics analysis of B. thuringiensis strain CT-43, using Illumina high throughout sequencing (RNA-seq) technique. The bacterial cells were collected a...
ORGANISM(S): Bacillus thuringiensis 
2013-04-17 | E-GEOD-39479 | biostudies-arrayexpress
UnknownThe complete chloroplast genome sequence of <i>Zehneria japonica</i> (Thunb.) H. Y. Liu (Cucurbitaceae), a medicinal plant.
Not available
S-EPMC12523466 | biostudies-literature
MetabolomicsDeciphering the metabolic perturbation in hepatic alveolar echinococcosis: a 1H NMR-based metabolomics study

BACKGROUND: Hepatic alveolar echinococcosis (HAE) is caused by the growth of Echinococcus multilocularis larvae in the liver. It is a chronic and potentially lethal parasitic disease. Early stage diagnosis for this disease is currently not available due to its long asymptomatic ...

2021-08-03 | MTBLS981 | MetaboLights
ProteomicsMelatonin confers saline-alkali tolerance by relieving nitrosative damage and S-nitrosylation of plasma membrane H+-ATPase 2 in tomato
Soil salination and alkalization are global problems impairing plant survival by disrupting REDOX homeostasis. Whether melatonin regulates REDOX homeostasis at nitrosative level, and thus affects plant saline-alkali tolerance remains unknown. In saline-alkali stress, excess nitric oxide (NO) causes ...
ORGANISM(S): 'Solanum lycopersicum' phytoplasma 
2025-04-28 | PXD056815 | Pride
Melatonin  nitric oxide  plasma membrane h+-atpase 2  saline-alkali stress  s-nitrosylation  tomato 
ProteomicsProteome and phosphoproteome of hippocampus after focal cerebral ischemia 2 h in mice
We obtained the profiles of neuronal phosphoproteome after cerebral ischemia onset by isolating mice hippocampus. Hippocampus combined from either ten sham or ten focal cerebral ischemia 2 h mice were lysed, digested, labeled with different TMT tags, then pooled and analyzed by LC/LC-MS/MS. Five per...
ORGANISM(S): Mus musculus (Mouse) 
2022-03-14 | PXD027145 | Pride
Proteome   phosphoproteome  hippocampus  cerebral ischemia 
ProteomicsProteomics data package from H-ManNAz and H-ManNAz C3-labeled HEK293T cells
The cells were metabolically labeled with H-ManNAz and H-ManNAz C3 HEK293T, and peptide samples of 293T cells were prepared by lysis, enzymatic hydrolysis, enrichment, and photocleavage, and finally proteomic information was obtained by LC-MS/MS.
ORGANISM(S): Homo Sapiens 
2026-01-16 | PXD073223 |
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