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TranscriptomicsImmune Response of Immature Dendritic Cells after Infection with Human Cytomegalovirus Strain TB40E
Microarray analysis and quantitative real-time PCR revealed that TB40E infection of DCs led to changes of the gene expression pattern. A variety of pro-inflammatory cytokines and chemokines (CXCL10, CXCL11, CCL5), TLR3 and genes whose products function downstream of the TLR3 signalling pathway (e.g....
ORGANISM(S): Homo sapiens 
2009-08-01 | E-GEOD-14816 | biostudies-arrayexpress
TranscriptomicsGene expression profiles of human immature dendritic cells after 3h, 6h and 12h of co-cultivation with Aspergillus fumigatus
Gene expression profiles of human immature dendritic cells after 3h, 6h, 9h and 12h of co-cultivation with Aspergillus fumigatus were compared to expression profiles from human immature dendritic cells after 3h, 6h, 9h and 12h of cultivation. We used microarrays to detail the gene expression of huma...
ORGANISM(S): Homo sapiens 
2011-03-29 | E-GEOD-21353 | biostudies-arrayexpress
TranscriptomicsExpression data from primary Glioblastoma in adults
Gene expression profiling revealed over-representation of a distinct (proneural-like) expression signature in long-term survivors that was linked to IDH1/2 mutation. However, among the IDH1/2-wildtype patients, tumors from long-term survivors did not show distinct gene expression profiles and includ...
ORGANISM(S): Homo sapiens 
2014-03-27 | E-GEOD-53733 | biostudies-arrayexpress
TranscriptomicsTranslocations Activating IRF4 Identify a Subtype of Germinal-Center-Derived B-cell Lymphoma Affecting Predominantly Children and Young Adults
Background: Germinal center B-cell (GCB) lymphomas are common in children and adults. The prognosis strongly depends on age. Subgroups of GCB-lymphomas are characterized by chromosomal translocations affecting immunoglobulin (IG) loci leading to oncogene deregulation. Methods: Novel IG translocation...
ORGANISM(S): Homo sapiens 
2011-06-24 | E-GEOD-22470 | biostudies-arrayexpress
Genomicsena-DATASET-DKFZ-IBIOS-17-08-2015-09:13:01:216-19 - samples
PAR-CLIP was performed on the Argonaute-2 protein (AGO2) in four lymphoma cell lines: Namalwa Raji SU-DHL-4 SU-DHL-6
EGAD00001001468 | EGA
Genomicsena-DATASET-DKFZ-IBIOS-16-11-2015-13:05:39:993-4 - samples
Part of WGS seq data of Maligant Lymphoma study (ICGC)
EGAD00001001673 | EGA
Genomicsena-DATASET-DKFZ-IBIOS-16-09-2015-13:05:30:578-414 - samples
After overexpression and knockdown of both described novel miRs nmiR-1 and nmiR-2 in BL cell lines (SU-DHL4 for nmiR-1 and Raji for nmiR-2), we performed regular RNA-Seq (including Mock controls for all cell lines) to identify their direct and indirect downstream mRNA targets.
EGAD00001001612 | EGA
Genomicsena-DATASET-DKFZ-IBIOS-06-10-2015-14:15:14:065-198 - samples
miRNA seq data of 13 cases (MMML)
EGAD00001001632 | EGA
Genomicsena-DATASET-DKFZ-IBIOS-16-11-2015-12:46:40:494-3 - samples
Part of RNA sequencing data of Malignant Lymphoma Study (ICGC)
EGAD00001001672 | EGA
Genomicsena-DATASET-DKFZ-IBIOS-23-09-2015-12:28:32:695-418 - samples
miRNA seq data of 43 cases out of dataset EGAD00001000650 (MMML)
EGAD00001001619 | EGA
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