Long Robert C RC

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Transcriptomics (127)
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UNIPROT ID/AC

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CHEBI ID

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Metabolite Name

4-hydroxyproline (1)
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N(1)-acetylspermine (1)

Study type

Transcription profiling by array (71)
Transcription profiling by tiling array (24)
ChIP-chip by array (9)
ChIP-chip by tiling array (8)
Comparative genomic hybridization by array (4)
Unknown experiment type (2)
Hi-C (2)
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RNA-seq of coding RNA from single cells (2)
Genotyping by array (1)
Other (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of coding RNA (1)

Release Date

2010 (45)
2007 (12)
2012 (11)
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2008 (10)
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2011 (8)
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Lab affiliation

University of Colorado-Anschutz Campus (2)
Institute for Biochemistry and Molecular Biology, Faculty of Medicine, University of Bonn (1)

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MLL2 facilitates long-range gene regulation through LINE1 elements [Micro-C]

Transcriptional regulation is tightly linked to chromatin organization, with H3K4me3 commonly marking both active and bivalent promoters. In embryonic stem cells (ESC), MLL2 is essential for H3K4me3 deposition at bivalent promoters, which has been proposed to facilitate the induction of major develo...

ORGANISM(S): Mus musculus

2025-10-23 | E-MTAB-15688 | biostudies-arrayexpress

MLL2 facilitates long-range gene regulation through LINE1 elements [scRNA-seq]

ORGANISM(S): Mus musculus

2026-07-12 | E-MTAB-17228 | biostudies-arrayexpress

Rate, spectrum, and evolutionary dynamics of spontaneous epimutations

Stochastic changes in cytosine methylation are a source of heritable epigenetic and phenotypic diversity in plants. Using the model plant Arabidopsis thaliana, we derive robust estimates of the rate at which methylation is spontaneously gained (forward epimutation) or lost (backward epimutation) at ...

ORGANISM(S): Arabidopsis thaliana

2015-05-13 | E-GEOD-64463 | biostudies-arrayexpress

Low input Hi-C datasets for a diffuse large B-cell lymphoma sample, healthy control human B-cells and mouse embryonic stem cells

In this experiment, we've examined chromatin conformation of OG2 (B6; CBA-Tg(Pou5f1-EGFP)2Mnn/J; stock number 004654) mouse stem cells cultured as described in (Shi et al., 2008), using different amounts of starting cells. We performed a modified in situ Hi-C protocol for 6 samples digested with Mbo...

ORGANISM(S): Mus musculus

2018-11-30 | E-MTAB-5875 | biostudies-arrayexpress

FACT and Spt6 Prevent Cryptic Transcription by Impeding H2A.Z Loading in Gene Bodies

H2A.Z is a highly conserved histone variant involved in several key nuclear processes. It is incorporated into promoters by SWR-C-related chromatin remodeling complexes, but whether it is also actively excluded from non-promoter regions is not clear. Here, we provide genomic and biochemical evidence...

ORGANISM(S): Saccharomyces cerevisiae

2015-05-12 | E-GEOD-62880 | biostudies-arrayexpress

pathogen_Pluminscens_25dC_24hr_exposure_post-adulthood_N2_tiling_array

modENCODE_submission_486 This submission comes from a modENCODE project of Robert Waterston. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: Our experiments are designed to detect all C. elegans transcripts by hybridizing RNA to commercially available genome til...