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Unknown (31807)
Proteomics (746)
Transcriptomics (512)
Genomics (204)
Metabolomics (143)
Models (9)
Multiomics (2)
Other (1)

Organisms

Homo sapiens (713)
Mus musculus (310)
Rattus norvegicus (37)
Arabidopsis thaliana (35)
Caenorhabditis elegans (23)
Oryza sativa (20)
Escherichia coli (19)
Saccharomyces cerevisiae (13)
Drosophila melanogaster (11)
Oryza sativa Japonica Group (7)
Gallus gallus (7)
Zea mays (7)
Sus scrofa (4)
Pseudomonas aeruginosa PAO1 (4)
Urocitellus parryii (3)
Vibrio parahaemolyticus RIMD 2210633 (2)
Edwardsiella ictaluri 93-146 (2)
Thermoanaerobacter sp. X514 (2)
Tetrahymena thermophila (2)
Populus tomentosa (2)
Cucumis sativus (2)
Toxoplasma gondii (2)
Actinobacillus pleuropneumoniae (2)
Aspergillus fumigatus (2)
Trypanosoma brucei (2)
Populus trichocarpa (2)
Nicotiana tabacum (2)
Danio rerio (2)
Escherichia coli K-12 (1)
Spalax carmeli (1)

Organisms

Homo sapiens (6)
Mus musculus (3)
Ureaplasma urealyticum 4318 (1)
Ureaplasma urealyticum 4155 (1)
Ureaplasma urealyticum 2608 (1)
Ureaplasma urealyticum 2033 (1)
Calohypnum plumiforme (1)
Oryza sativa Indica Group (1)
Drosophila melanogaster (1)

Repository

biostudies-arrayexpress (594)
pride (499)
iProX (201)
MetaboLights (139)
EGA (105)
MassIVE (31)
ENA (18)
BioModels (7)
geo (6)
GNPS (4)
jPOST (4)
PanoramaPublic (2)
Cell Collective (1)
FAIRDOMHub (1)
GPMDB (1)
NODE (1)
PeptideAtlas (1)

Tissue

Cell culture (127)
Epithelial cell (42)
Brain (17)
Permanent cell line cell (15)
Plant cell (15)
Whole body (15)
Liver (14)
Leaf (13)
Lung (13)
Hepatocyte (11)
Kidney (11)
Blood plasma (10)
Heart (10)
Testis (9)
Blood serum (8)
Blood (7)
Embryonic stem cell (7)
Skin (7)
Fibroblast (6)
Malignant cell (6)
Melanocyte (6)
Blood cell (5)
Saliva (5)
T cell (5)
B cell (4)
Early embryonic cell (4)
Embryo (4)
Fungal asexual spore (4)
HeLa cell (4)
HADSC (1)

Disease

Disease free (23)
Breast cancer (13)
Colon cancer (10)
Acute leukemia (6)
Cervix carcinoma (6)
Liver cancer (6)
Influenza (4)
Melanoma (4)
Neuroblastoma (4)
Prostate adenocarcinoma (4)
Type 2 diabetes mellitus (4)
Brain cancer (3)
Cardiovascular system disease (3)
Chronic lymphocytic leukemia (3)
Lung adenocarcinoma (3)
Pancreatic cancer (3)
Alzheimer's disease (2)
Lung cancer (2)
Lymphoma (2)
Malignant neoplasm of ovary (2)
Mixed disorder as reaction to stress (2)
Skin cancer (2)
Wounds and Injuries (2)
High bone mineral density (1)
Schizophrenia (1)
Osteocytes/osteoblasts (1)
SS2-infected (1)
Not Available (1)
Amyotrophic lateral sclerosis (1)
Endometrial Endometrioid Adenocarcinoma (1)

Technology Type

Mass Spectrometry (499)
Shotgun proteomics (232)
Mass spectrometry (119)
Bottom-up proteomics (74)
Data-dependent acquisition (53)
Affinity purification coupled with mass spectrometry proteomics (48)
Gel-based experiment (34)
Top-down proteomics (26)
Data-independent acquisition (25)
Chemical cross-linking coupled with mass spectrometry proteomics (14)
SWATH MS (13)
Mass spectrometry assay (12)
NMR spectroscopy (10)
Proteogenomics (6)
Affinity proteomics (5)
All-ion fragmentation (5)
HDMSE (4)
Illumina HiSeq 2000 (3)
DiaPASEF (3)
Immunopeptidomics (3)
Olink affinity proteomics (3)
MSE (2)
AB SOLiD System 3.0 (1)
Affymetrix/Illumina (1)
ILLUMINA, Illumina HiSeq 2000 (1)
ILLUMINA, NextSeq 500, Illumina HiSeq 2000 (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
Illumina MiSeq, Illumina Genome Analyzer IIx (1)

Instrument Platform

Illumina HiSeq 2000 (9)
Orbitrap Fusion Lumos (7)
Q Exactive (7)
Illumina NovaSeq 6000 (5)
NextSeq 500 (4)
Q Exactive HF (4)
TripleTOF 6600 (3)
LTQ Orbitrap Elite (3)
GeneChip Scanner 3000 7G (2)
Illumina MiSeq (2)
Illumina HiSeq 2500 (2)
Illumina HiSeq 4000 (2)
LTQ (2)
Q Exactive HF-X (2)
Element AVITI (1)
GeneChip Hybridization Oven 645 (1)
Illumina Genome Analyzer II (1)
NA (1)
Illumina HiSeq 1000 (1)
HiSeq X Ten (1)
NextSeq 550 (1)
AB 5500xl Genetic Analyzer (1)
MicrOTOF-Q II (1)
Instrument (1)
LTQ Orbitrap (1)
LTQ XL (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Fusion ETD (1)
Q Exactive Plus (1)
SolariX (1)

Publication Date

2025 (140)
2024 (138)
2023 (119)
2022 (118)
2026 (110)
2021 (91)
2013 (90)
2014 (87)
2011 (86)
2015 (78)
2016 (77)
2012 (65)
2020 (57)
2010 (53)
2019 (46)
2017 (43)
2018 (29)
2009 (21)
2008 (17)
2007 (8)
2005 (5)
2006 (5)
2002 (1)
2004 (1)

UNIPROT ID/AC

P00573 (1)
P07659 (1)
P42212 (1)
P06208-2 (1)

CHEBI ID

CHEBI:15343 (2)
CHEBI:15361 (2)
CHEBI:16236 (2)
CHEBI:16526 (2)
CHEBI:104012 (1)
CHEBI:104362 (1)
CHEBI:104873 (1)
CHEBI:10727 (1)
CHEBI:1109 (1)
CHEBI:11230 (1)
CHEBI:11424 (1)
CHEBI:11561 (1)
CHEBI:11596 (1)
CHEBI:11805 (1)
CHEBI:11812 (1)
CHEBI:11814 (1)
CHEBI:11851 (1)
CHEBI:11951 (1)
CHEBI:12071 (1)
CHEBI:12427 (1)
CHEBI:128769 (1)
CHEBI:12936 (1)
CHEBI:12952 (1)
CHEBI:132146 (1)
CHEBI:132511 (1)
CHEBI:132515 (1)
CHEBI:132537 (1)
CHEBI:132957 (1)
CHEBI:134127 (1)
CHEBI:134128 (1)

Metabolite Name

Hypoxanthine (22)
Creatine (21)
Glutamine (19)
Guanosine (19)
Taurine (19)
Uric acid (19)
Pyroglutamic acid (18)
Valine (18)
Adenosine (17)
Citric acid (17)
Inosine (17)
Ornithine (17)
Uracil (17)
Adenine (16)
Cholic acid (16)
L-Histidine (16)
Leucine (16)
Threonine (16)
Uridine (16)
Alanine (15)
Choline (15)
Isoleucine (15)
L-Tyrosine (15)
Phenylalanine (15)
Proline (15)
Xanthine (15)
Arachidonic acid (14)
Creatinine (14)
Glycine (14)
Lysine (14)

First Public Date

2013 (4)
2014 (3)
2025 (2)
2024 (2)
2019 (2)
2022 (1)
2018 (1)
2017 (1)
2016 (1)
2015 (1)

Modelling Approach

Ordinary differential equation model (4)
Constraint-based model (1)
Metabolic network (1)
Other (1)

Lab affiliation

Imperial College London (7)
Nankai University (5)
WEHI (5)
Biotechnology Research Center, No.2 Tiansheng Road, BeiBei District, Chongqing, 400715,P.R.China (4)
Vividion Therapeutics (4)
Huazhong Agricultural University (3)
Shandong University (3)
Sichuan University (3)
The Walter and Eliza Hall Institute (3)
Zhejiang University (3)
Babraham Institute (2)
Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China. (2)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
Chongqing Medical University (2)
Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China. (2)
Department of Biochemistry and Molecular Biology, Capital Medical University, Beijing, 100069, China (2)
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Department of Immunobiology, College of Life Science and Technology, Jinan University, Guangzhou, China. (2)
Department of Radiation Oncology, Shanghai Proton and Heavy Ion Center, Fudan University Cancer Hospital, China (2)
Department of pathophysiology, School of Basic Medical Sciences, Wuhan University, Wuhan 430071, China (2)
Fudan University (2)
Hangzhou Medical College (2)
Hangzhou Normal University (2)
Institute of Drug Discovery Technology, Ningbo University, Ningbo, Zhejiang, 315211 China (2)
Institute of Medical Biology, Chinese Academy of Medical Science and Peking Union Medical School, Kunming, China. (2)
Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
Key Laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, China. (2)
Mayo Clinic, Department of Oncology (2)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (2)