Luo Di D - OmicsDI

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Unknown (237)
Transcriptomics (70)
Genomics (9)
Proteomics (8)
Metabolomics (8)

Organisms

Homo sapiens (43)
Mus musculus (20)
Zea mays (2)
Gallus gallus (2)
Saccharomyces cerevisiae (2)
Metarhizium acridum (1)
Aspergillus flavus (1)
Eimeria tenella (1)
Fragaria x ananassa (1)
Plasmodium falciparum 3D7 (1)
Oryza sativa (1)
Nicotiana tabacum (1)
Hordeum vulgare (1)
Pseudomonas aeruginosa PAO1 (1)
Bos taurus (1)
Oryza sativa Japonica Group (1)
Caenorhabditis elegans (1)
Rattus norvegicus (1)
Drosophila melanogaster (1)
Danio rerio (1)
Arabidopsis thaliana (1)
Magnaporthe (1)

Repository

biostudies-arrayexpress (78)
MetaboLights (8)
pride (6)
iProX (2)
EGA (1)

Tissue

Cell culture (4)
Epithelial cell (2)

Disease

Influenza (2)
Breast carcinoma (1)
Breast cancer (1)
Acute leukemia (1)
Pancreatic cancer (1)

Technology Type

Mass spectrometry (8)
Mass Spectrometry (6)
Bottom-up proteomics (2)
Shotgun proteomics (2)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - reverse phase (3)
Illumina NovaSeq X (2)
BGISEQ-500 (1)
Illumina MiSeq (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 3000 (1)
5975C Series GC/MSD (Agilent) (1)
Agilent GC/MS, LECO GC/TOFMS (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
UPLC Q-TOF Premier (Waters) (1)

Publication Date

2014 (15)
2010 (13)
2013 (12)
2015 (11)
2012 (8)
2011 (7)
2026 (6)
2024 (5)
2023 (5)
2016 (3)
2021 (2)
2009 (2)
2022 (1)
2020 (1)
2007 (1)
2002 (1)
2019 (1)

CHEBI ID

CHEBI:16113 (3)
CHEBI:22470 (3)
CHEBI:27471 (3)
CHEBI:30769 (3)
CHEBI:100246 (2)
CHEBI:143246 (2)
CHEBI:143726 (2)
CHEBI:145287 (2)
CHEBI:149776 (2)
CHEBI:15611 (2)
CHEBI:15710 (2)
CHEBI:15756 (2)
CHEBI:15799 (2)
CHEBI:15891 (2)
CHEBI:15956 (2)
CHEBI:15968 (2)
CHEBI:16285 (2)
CHEBI:16335 (2)
CHEBI:16359 (2)
CHEBI:16467 (2)
CHEBI:165803 (2)
CHEBI:16615 (2)
CHEBI:16643 (2)
CHEBI:1670 (2)
CHEBI:16704 (2)
CHEBI:16750 (2)
CHEBI:16919 (2)
CHEBI:17033 (2)
CHEBI:170528 (2)
CHEBI:17191 (2)

Metabolite Name

5-Aminopentanal (3)
Biotin amide (3)
(10S)-Juvenile hormone III diol (2)
(1R,6R)-1,4,5,5a,6,9-Hexahydrophenazine-1,6-dicarboxylate (2)
(1xi,3xi)-1,2,3,4-Tetrahydro-1-methyl-beta-carboline-3-carboxylic acid (2)
(2R)-2-Hydroxy-2-methylbutanenitrile (2)
(3'x,5'a,9'x,10'b)-O-(3-Hydroxy-6-oxo-7-drimen-11-yl)umbelliferone (2)
(3a,5b,7a,12a)-24-[(carboxymethyl)amino]-1,12-dihydroxy-24-oxocholan-3-yl-b-D-Glucopyranosiduronic acid (2)
(3b,20R,22R)-3,20,27-Trihydroxy-1-oxowitha-5,24-dienolide 3-glucoside (2)
(7b,10a)-3-Hydroxy-1,3,5-cadinatrien-9-one (2)
(E)-1-Cinnamoylpyrrolidine (2)
(E,E,E)-Sylvatine (2)
(R)-2-Hydroxysterculic acid (2)
1,2,3,4-Tetrahydro-alpha,7-dihydroxy-beta-(hydroxymethyl)-9-methoxy-3,4-dioxocyclopenta[c][1]benzopyran-6-propanal (2)
1,2-Bis(4-hydroxyphenyl)-2-propanol (2)
1-(2,3-Dihydro-6-methyl-1H-pyrrolizin-5-yl)-1,4-pentanedione (2)
1-(2-Furanyl)-1-butanone (2)
1-(Hydroxymethyl)-5,5-dimethyl-2,4-imidazolidinedione (2)
1-Acetoxy-2-hydroxy-16-heptadecyn-4-one (2)
1-Octen-3-yl glucoside (2)
12-Hydroxydodecanoic acid (2)
12alpha-Hydroxy-13,18-dehydroparain (2)
16-Hydroxy-10-oxohexadecanoic acid (2)
2'''-N-Acetyl-6'''-deamino-6'''-hydroxyparomomycin II (2)
2',7-Dihydroxy-4'-methoxy-8-prenylflavan 2',7-diglucoside (2)
2'-Deamino-2'-hydroxy-6'-dehydroparomamine (2)
2'-Deoxyguanosine 5'-monophosphate (2)
23-trans-p-Coumaroyloxytormentic acid (2)
28-[Glucosyl-(1->6)-glucosyl]oleanolic acid 3-arabinoside (2)
3''-Hydroxy-geranylhydroquinone (2)

Study type

Transcription profiling by array (46)
RNA-seq of coding RNA (16)
ChIP-seq (4)
Methylation profiling by high throughput sequencing (3)
Transcription profiling by SAGE (1)
Differential (1)
Animal - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
Other (1)
DNA-seq (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2023 (32)
2020 (31)
2025 (28)
2024 (26)
2022 (23)
2021 (22)
2015 (20)
2014 (20)
2013 (16)
2010 (14)
2016 (12)
2012 (11)
2011 (11)
2019 (11)
2018 (10)
2017 (9)
2026 (8)
2009 (3)
2007 (3)
2008 (3)
2002 (1)
1999 (1)

Lab affiliation

China-Japan Friendship Hospital, Beijing, China (1)
China-Japan Friendship Hospital, China (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Gene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA (1)
Harold C. Simmons Comprehensive Cancer Center, UT Southwestern Medical Center, Dallas, TX, USA (1)
Translational Genomics Research Institute (1)

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Synthesis of cationic dibenzosemibullvalene-based phase-transfer catalysts by di-π-methane rearrangements of pyrrolinium-annelated dibenzobarrelene derivatives.

Not available

S-EPMC3063005 | biostudies-literature

A σD-dependent antisense transcript modulates expression of the cyclic-di-AMP hydrolase GdpP in Bacillus subtilis.

Not available

S-EPMC4036058 | biostudies-literature

An HD-domain phosphodiesterase mediates cooperative hydrolysis of c-di-AMP to affect bacterial growth and virulence.

Not available

S-EPMC4343097 | biostudies-literature

Gene expression data for the budding yeast mutants pol30-8, dot1Δ and pol30-8 dot1Δ

The mutation in the budding yeast gene PCNA, pol30-8, as well as deletion of DOT1 (dot1Δ), encoding the only histone H3 K79 methyltransferase in budding yeast, have been implicated in telomeric silencing. To further analyze these mutants, we used microarrays to study whether either pol30-8, dot1Δ or...

ORGANISM(S): Saccharomyces cerevisiae

2011-04-17 | E-GEOD-27222 | biostudies-arrayexpress

A novel function of anaphase promoting complex subunit 10 in tumor progression in non-small cell lung cancer.

Not available

S-EPMC6527291 | biostudies-literature

Characterization of the dual regulation by a c-di-GMP riboswitch Bc1 with a long expression platform from Bacillus thuringiensis.

Not available

S-EPMC11218506 | biostudies-literature

[2,6-Di-fluoro-3-(pyridin-2-yl-κN)pyridin-4-yl-κC (4)](penta-ne-2,4-dionato-κ(2) O,O')iridium(III).

Not available

S-EPMC3884251 | biostudies-literature

Biodegradation of di-n-butyl phthalate by bacterial consortium LV-1 enriched from river sludge.

Not available

S-EPMC5444784 | biostudies-literature

A STING-based fluorescent polarization assay for monitoring activities of cyclic dinucleotide metabolizing enzymes.

Not available

S-EPMC8341399 | biostudies-literature

Illumina microarray experiment on LSD1 deletion ES cell with Lsd1Lox/Δ3 and Lsd1Δ3/Δ3

Lysine specific demethylase 1 (LSD1), which demethylates mono- and di- methylated histone H3-Lys4 as part of a complex including CoREST and histone deacetylases (HDAC), is essential for embryonic development in the mouse beyond e6.5 days. Here, we demonstrate that LSD1 expression and therefore funct...

ORGANISM(S): Mus musculus

2010-12-06 | E-GEOD-21131 | biostudies-arrayexpress

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332 Results

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