Lymphatics - OmicsDI

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Unknown (618)
Transcriptomics (135)
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Organisms

Mus musculus (89)
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Organisms

Mus musculus (73)
Homo sapiens (15)
Danio rerio (5)
Rattus norvegicus (4)
Brugia malayi (1)

Repository

ENA (111)
geo (95)
biostudies-arrayexpress (46)
dbGaP (3)
pride (3)
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Tissue

Lymph (2)
Cell culture (1)

Disease

Squamous cell carcinoma (1)
Lymphatic drainage of the splenic flexure (1)
Inflammatory bowel disease (1)

Technology Type

Mass Spectrometry (3)
Shotgun proteomics (2)
Mass spectrometry (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
STAR v2.5.3a, rpkmforgenes, RSeQC 2.6.1 (1)
Illumina Nextera XT index kits (Set A–D) (1)
Oligo(dT) primer and SuperScript II reverse transcriptase (ThermoFisher Scientific), TapeStation 4200 or 2100 Bioanalyzer with a DNA High Sensitivity chip (Agilent Biotechnologies) (1)
Aria III (BD Biosciences) (1)
NextSeq 2000 (1)
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QExactive (Thermo Scientific) (1)

Publication Date

2025 (22)
2022 (16)
2012 (14)
2024 (13)
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2008 (7)
2019 (7)
2016 (6)
2010 (6)
2018 (6)
2013 (4)
2011 (4)
2014 (3)
2007 (3)
2021 (2)
2017 (2)
2015 (1)
2006 (1)
2005 (1)

CHEBI ID

CHEBI:80024 (1)
CHEBI:15858 (1)
CHEBI:47794 (1)
CHEBI:139484 (1)
CHEBI:6063 (1)
CHEBI:62825 (1)
CHEBI:77198 (1)
CHEBI:29089 (1)
CHEBI:10048 (1)
CHEBI:39457 (1)
CHEBI:57905 (1)
CHEBI:4606 (1)
CHEBI:138491 (1)
CHEBI:8281 (1)
CHEBI:8055 (1)
CHEBI:7453 (1)
CHEBI:38307 (1)
CHEBI:61696 (1)
CHEBI:50710 (1)
CHEBI:137150 (1)
CHEBI:29501 (1)
CHEBI:60954 (1)
CHEBI:86162 (1)
CHEBI:18961 (1)
CHEBI:15654 (1)
CHEBI:15648 (1)
CHEBI:139482 (1)
CHEBI:30633 (1)
CHEBI:85038 (1)
CHEBI:4793 (1)

Metabolite Name

1-octadecanoyl-2-nonadecanoyl-sn-glycero-3-phosphoserine (1)
13S-hydroperoxy-9Z,11E-octadecadienoic acid (1)
2,4,6-trimethyl-2Z-tetracosenoic acid (1)
2-(5'-methylthio)pentylmalate (1)
2-Decenedioic acid (1)
2-hydroxy-15-tetracosenoic acid (1)
2-hydroxy-nonanoic acid (1)
2-hydroxy-undecanoic acid (1)
2-Methyl-3-hydroxybutyricacid (1)
2-oxo-tridecanoic acid (1)
3-Methyladipicacid (1)
3R-methyl-3,5-dihydroxy-pentanoic acid (1)
4-oxo-pentadecanoic acid (1)
7-Prenyloxy-3',4'-dimethoxyisoflavone (1)
Dihydrocamalexate (1)
Heptanedioic acid (1)
2-Palmitoleoyl-glycerol (1)
Mycolipanolic acid (C27) (1)
S-9-methylthiononylhydroximoyl-L-cysteine (1)
Ubiquinol-1 (1)
Dihydro-4,4-dimethyl-2,3-Furandione (1)
1-oleoylglycerol (1)
2-hydroxy-pentadecanoic acid (1)
1-O-Octadec-9-enyl glycerol (1)
2-Oxophytanate (1)
Eupachlorin acetate (1)
(9R,10R)-Dihydroxyoctadecanoic acid (1)
2,3-Dihydroxycyclopentaneundecanoic acid (1)
(1S,3R,4S)-3,4-Dihydroxycyclohexane-1-carboxylate (1)
D-Erythrulose (1)

First Public Date

2025 (21)
2024 (14)
2022 (13)
2020 (13)
2026 (10)
2014 (9)
2023 (8)
2019 (7)
2018 (7)
2017 (5)
2021 (2)
2016 (1)
2013 (1)

Modelling Approach

Ordinary differential equation model (1)

Study status

Not yet recruiting (1)

Lab affiliation

Centre for Genomic Regulation (CRG) (1)
Division of Pulmonary and Critical Care Medicine Weill Cornell Medicine (1)
Radiation Oncology; Weill Cornell medicine College; 1300 York Avenue; 10065, New York, New York, USA (1)

IsPrivate

False (1)

Classification

helminths (1)

Study type

Transcription profiling by array (33)
RNA-seq of coding RNA (5)
RNA-seq of coding RNA from single cells (4)
Comparative genomic hybridization by array (3)
ChIP-seq (1)
Interventional (1)

Release Date

2022 (71)
2021 (68)
2023 (59)
2024 (57)
2020 (56)
2025 (45)
2019 (45)
2016 (42)
2017 (32)
2018 (31)
2014 (27)
2012 (24)
2013 (18)
2015 (17)
2010 (16)
2026 (12)
2009 (10)
2008 (9)
2011 (8)
2007 (5)
2006 (4)
2003 (3)
2001 (3)
2005 (2)

Location

Australia (1)

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Transcription profiling of mouse T cell model to characterize transendothelial migration across lymphatics

Sphingosine 1-phosphate (S1P) influences T cell migration into and out of secondary lymphoid organs; however, its mechanism of action remains uncertain. Our previous research shows that agonism of the S1P receptor S1P1 inhibits the egress of T lymphocytes from the peripheral tissues into afferent ly...

ORGANISM(S): Mus musculus

2008-06-16 | E-GEOD-9237 | biostudies-arrayexpress

Lymphatics in bone arise from pre-existing lymphatics.

Not available

S-EPMC7188445 | biostudies-literature

Mechanical stimulation on superificial cervical lymphatics enhances cerebropsinal fluid draiange

PRJNA1156027 | ENA

Meningeal lymphatics-microglia axis regulates synaptic physiology [ligation]

PRJNA1126617 | ENA

Meningeal lymphatics-microglia axis regulates synaptic physiology [acz.vehicle]

PRJNA1201142 | ENA

Contractile physiology of lymphatics.

Not available

S-EPMC2925033 | biostudies-literature

Bulk RNA-Sequencing of mouse large intestinal lymphatics (capillaries and collectors)

PRJNA818309 | ENA

Meningeal lymphatics-microglia axis regulates synaptic physiology [acz.vehicle]

Meningeal lymphatics serve as the primary outlet for cerebrospinal fluid, and their dysfunction is associated with various neurodegenerative conditions. Previous studies have demonstrated that dysfunctional meningeal lymphatics evoke behavioral deficits, but the neural mechanisms underlying those be...

ORGANISM(S): Mus musculus

2025-05-29 | GSE285073 | GEO

Meningeal lymphatics-microglia axis regulates synaptic physiology [ligation]

ORGANISM(S): Mus musculus

2025-03-21 | GSE270428 | GEO

Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes

PRJNA1271534 | ENA

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