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Unknown (703)
Transcriptomics (25)
Proteomics (19)
Genomics (6)
Metabolomics (2)

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Homo sapiens (25)
Mus musculus (9)
Equus caballus (3)
Trypanosoma brucei gambiense (1)
Ambystoma mexicanum (1)
Trypanosoma brucei brucei (1)
Caenorhabditis elegans (1)
Canis lupus familiaris (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (30)
pride (11)
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Tissue

Cell culture (5)
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Disease

Acute leukemia (1)
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Technology Type

Mass Spectrometry (11)
Shotgun proteomics (8)
Mass spectrometry (2)
Top-down proteomics (2)
Bottom-up proteomics (1)
Data-dependent acquisition (1)

Instrument Platform

Illumina HiSeq 2500 (4)
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Illumina NovaSeq 6000 (2)
Illumina HiSeq 2000 (2)
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Q Exactive (1)
TripleTOF 6600 (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2016 (7)
2021 (5)
2018 (5)
2014 (4)
2010 (4)
2017 (4)
2026 (3)
2019 (3)
2015 (3)
2013 (3)
2020 (2)
2008 (2)
2011 (1)
2007 (1)
2004 (1)
2025 (1)
2024 (1)
2022 (1)

CHEBI ID

CHEBI:1157 (1)
CHEBI:1237 (1)
CHEBI:131692 (1)
CHEBI:131694 (1)
CHEBI:131924 (1)
CHEBI:132188 (1)
CHEBI:133140 (1)
CHEBI:133657 (1)
CHEBI:134365 (1)
CHEBI:134428 (1)
CHEBI:134451 (1)
CHEBI:134510 (1)
CHEBI:136235 (1)
CHEBI:136236 (1)
CHEBI:136248 (1)
CHEBI:136262 (1)
CHEBI:136263 (1)
CHEBI:136272 (1)
CHEBI:136273 (1)
CHEBI:136348 (1)
CHEBI:136361 (1)
CHEBI:136371 (1)
CHEBI:136479 (1)
CHEBI:137055 (1)
CHEBI:137118 (1)
CHEBI:137139 (1)
CHEBI:137143 (1)
CHEBI:137144 (1)
CHEBI:137146 (1)
CHEBI:137147 (1)

Metabolite Name

(+)-15-nor-4-thujopsen-3-one (1)
(+)-Adlumine (1)
(+)-gamma-Hydroxy-L-homoarginine (1)
(+/-)-5-[(tert-Butylamino)-2'-hydroxypropoxy]-1,2,3,4-tetrahydro-1- naphthol (1)
(-)-2-((3,5-Dihydroxy-4-methoxyphenyl)methyl)-2,4,6-trihydroxy-3(2H)-benzofuranone (1)
(1-Ribosylimidazole)-4-acetate (1)
(25R)-3alpha,7alpha-dihydroxy-5beta-cholestan-27-oyl taurine (1)
(2R,3S)-3-Isopropylmalate (1)
(2S)-2-Isopropylmalate (1)
(2S)-2-{[1-(R)-Carboxyethyl]amino}pentanoate (1)
(3'-sulfo)Galbeta-Cer(d18:0/2-OH-20:0) (1)
(3'-sulfo)Galbeta-Cer(d18:0/2-OH-24:1(15Z)) (1)
(3R)-beta-Leucine (1)
(5Z,7E)-9,10-seco-5,7,10(19)-cholestatriene (1)
(9Z)-Hexadecenoic acid (1)
(9Z)-Tetradecenoic acid (1)
(R)-2-Hydroxyglutarate (1)
(R)-3-((R)-3-Hydroxybutanoyloxy)butanoate (1)
(R)-Lactate (1)
(S)-1-Pyrroline-5-carboxylate (1)
(S)-2-Aceto-2-hydroxybutanoate (1)
(S)-2-Acetolactate (1)
(S)-2-Amino-3-(3-hydroxy-4-oxo-4H-pyridin-1-yl)propanoate (1)
(S)-3-Methyl-2-oxopentanoic acid (1)
(S)-ATPA (1)
(S)-Dihydroorotate (1)
(S)-Malate (1)
1(2H)-Isoquinolinone (1)
1,13-Dihydroxy-herbertene (1)
1,2-Bis(4-nitrophenyl)ethane (1)

First Public Date

2014 (1)

Study type

Transcription profiling by array (11)
RNA-seq of coding RNA (10)
DNA-seq (5)
Comparative genomic hybridization by array (4)

Release Date

2021 (79)
2023 (79)
2022 (79)
2024 (68)
2020 (61)
2019 (59)
2025 (48)
2016 (45)
2018 (41)
2017 (36)
2015 (27)
2014 (22)
2013 (22)
2010 (10)
2011 (9)
2012 (9)
2026 (8)
2008 (8)
2007 (6)
2009 (5)
2006 (4)
2004 (3)
2003 (3)
2005 (2)

Lab affiliation

Jacqui Wood Cancer Centre, Medical Research Institute, Ninewells Hospital and Medical School, University of Dundee, James Arrott Drive, Dundee DD1 9SY, Scotland (2)
Biopharmaceutical development, R&D, AstraZeneca, Cambridge, UK (1)
Centre for Cardiovascular Science, Queen’s Medical Research Institute, University of Edinburgh, Edinburgh, UK (1)
Edinburgh Cancer Research Centre Principal investigator and Mass Spectrometry Facility Manager (1)
Full Professor of Paediatric Molecular Haemato-Oncology School of Medicine,University College Dublin, School of Medicine, Systems Biology Ireland Temple Street Dublin 1 (1)
Professor of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Ireland (1)
SynthSys University of Edinburgh (1)
Systems Biology Ireland, University College Dublin, Belfield, Dublin 4. (1)
The Hospital for Sick Children (1)
University of Edinburgh (1)

Tags

xref:PubMed:19584263 (1)

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RNA-Seq of mRNA derived from fourth larval stage larvae from C. elegans strain PE1328 treated for 16 hours at 20 degrees Celsius with 5-Ph-IAA compared to untreated controls

The objective of the experiment was to determine the impact of cap-adjacent 2'-O-ribose methylation on steady-state mRNA levels in a background lacking the decapping exonculease EOL-1. We depleted CMTR-1 protein, which is the main enzyme responsible for of cap-adjacent 2'-O-ribose methylation in C. ...

ORGANISM(S): Caenorhabditis elegans

2026-03-05 | E-MTAB-16687 | biostudies-arrayexpress

Translation and cultural adaption of MacLeod Clark professional identity scale among Chinese therapy students.

Not available

S-EPMC11774393 | biostudies-literature

C-H and C-N Activation at Redox-Active Pyridine Complexes of Iron.

Not available

S-EPMC5266524 | biostudies-literature

Structure of trans-resveratrol in complex with the cardiac regulatory protein troponin C.

Not available

S-EPMC3043152 | biostudies-literature

Alkali-Controlled C-H Cleavage or N-C Bond Formation by N2-Derived Iron Nitrides and Imides.

Not available

S-EPMC5266523 | biostudies-literature

Lamin A/C truncation in dilated cardiomyopathy with conduction disease.

Not available

S-EPMC169171 | biostudies-literature

Tenascin-C expression controls the maturation of articular cartilage in mice.

Not available

S-EPMC7027060 | biostudies-literature

Equine RNAseq Tissue pool

This dataset is comprised of RNA samples from 11 horses of various ages and sex that comprise the following tissues: Adipose Tissue, Adrenal Cortex, Adrenal Medulla, Aorta, Articular Cartilage (foal), Bladder, Bone, Bone Marrow, Cecum, Cerebrum, Cornea, Embryo (whole embryo, 34d), Endometrium (preg...

ORGANISM(S): Equus caballus

2015-05-15 | E-MTAB-2879 | biostudies-arrayexpress

Analysis of Unannotated Equine Transcripts Identified by mRNA Sequencing

Horse-specific genes are not readily identified from available equine EST/cDNA resources due to relatively limited coverage. In addition, equine gene sets predicted in silico by Ensembl and NCBI will not identify horse specific genes since they rely on homology-based projection of gene structure ann...

ORGANISM(S): Equus caballus

2013-07-30 | E-GEOD-46858 | biostudies-arrayexpress

G418 induces programmed cell death in Acanthamoeba through the elevation of intracellular calcium and cytochrome c translocation.

Not available

S-EPMC6349814 | biostudies-literature

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